Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0073.Seq
         (538 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ243710-1|CAB57345.3| 1299|Drosophila melanogaster prickle sple...    30   2.3  
AJ243709-1|CAB99211.2| 1029|Drosophila melanogaster prickle pkM ...    30   2.3  
AJ243708-1|CAB57344.3|  963|Drosophila melanogaster prickle pk i...    30   2.3  
AE013599-318|AAF59281.2| 1299|Drosophila melanogaster CG11084-PC...    30   2.3  
AE013599-313|AAF59284.2| 1029|Drosophila melanogaster CG11084-PB...    30   2.3  
AE013599-308|AAM68908.1|  963|Drosophila melanogaster CG11084-PA...    30   2.3  
AY118614-1|AAM49983.1|  326|Drosophila melanogaster LP10853p pro...    29   4.0  
AE014296-3288|AAF49060.1|  326|Drosophila melanogaster CG7306-PA...    29   4.0  
AE014297-3098|AAF55956.1|  444|Drosophila melanogaster CG13407-P...    28   9.3  

>AJ243710-1|CAB57345.3| 1299|Drosophila melanogaster prickle sple
           isoform protein.
          Length = 1299

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 213 PSGYGMSSPPRCFPSAMTCPSSNEAYGEY*AVGSGLALPLALL 85
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L
Sbjct: 374 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPL 416


>AJ243709-1|CAB99211.2| 1029|Drosophila melanogaster prickle pkM
           isoform protein.
          Length = 1029

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 213 PSGYGMSSPPRCFPSAMTCPSSNEAYGEY*AVGSGLALPLALL 85
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L
Sbjct: 104 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPL 146


>AJ243708-1|CAB57344.3|  963|Drosophila melanogaster prickle pk
           isoform protein.
          Length = 963

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 213 PSGYGMSSPPRCFPSAMTCPSSNEAYGEY*AVGSGLALPLALL 85
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L
Sbjct: 38  PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPL 80


>AE013599-318|AAF59281.2| 1299|Drosophila melanogaster CG11084-PC,
           isoform C protein.
          Length = 1299

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 213 PSGYGMSSPPRCFPSAMTCPSSNEAYGEY*AVGSGLALPLALL 85
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L
Sbjct: 374 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPL 416


>AE013599-313|AAF59284.2| 1029|Drosophila melanogaster CG11084-PB,
           isoform B protein.
          Length = 1029

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 213 PSGYGMSSPPRCFPSAMTCPSSNEAYGEY*AVGSGLALPLALL 85
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L
Sbjct: 104 PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPL 146


>AE013599-308|AAM68908.1|  963|Drosophila melanogaster CG11084-PA,
           isoform A protein.
          Length = 963

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 213 PSGYGMSSPPRCFPSAMTCPSSNEAYGEY*AVGSGLALPLALL 85
           PSG G+++PP      M  PSS+ A   Y A  +   LP + L
Sbjct: 38  PSGQGLATPPALGSGGMGLPSSSSASALYAAQAAAGILPTSPL 80


>AY118614-1|AAM49983.1|  326|Drosophila melanogaster LP10853p
           protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -2

Query: 192 SPPRCFPSAMTCPSSNEAY 136
           SPPR   +A+TCPS+ ++Y
Sbjct: 261 SPPRAEANALTCPSTKQSY 279


>AE014296-3288|AAF49060.1|  326|Drosophila melanogaster CG7306-PA
           protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -2

Query: 192 SPPRCFPSAMTCPSSNEAY 136
           SPPR   +A+TCPS+ ++Y
Sbjct: 261 SPPRAEANALTCPSTKQSY 279


>AE014297-3098|AAF55956.1|  444|Drosophila melanogaster CG13407-PA
           protein.
          Length = 444

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 24/70 (34%), Positives = 31/70 (44%)
 Frame = -2

Query: 210 SGYGMSSPPRCFPSAMTCPSSNEAYGEY*AVGSGLALPLALLKSMGDGNHSPSGGPYARL 31
           SGYG   P   +      PS + +     + GSG A P A        +H P+G P A  
Sbjct: 89  SGYGGIEPSVEYELQHDPPSGSFSSFHPSSAGSGPAYPSA--------HHPPAGPPPAPP 140

Query: 30  PTKAIK*KKK 1
           PTK+ K  KK
Sbjct: 141 PTKSSKKSKK 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,781,649
Number of Sequences: 53049
Number of extensions: 389854
Number of successful extensions: 846
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)