Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0072.Seq
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    28   0.22 
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    25   2.1  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   6.3  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   6.3  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   6.3  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    23   8.3  

>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 28.3 bits (60), Expect = 0.22
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = +1

Query: 373 MQAPQKNPPRPLVAALKDIVPVAMMEA*HPPTVPAQVEELLQLSVTAKSDAASSEDGFLV 552
           M   +  PPRPL +ALKDI       +  P + P+ + E    S T +  A++S D  +V
Sbjct: 1   MSGNESLPPRPLGSALKDIGAFFGRSSKTPRSPPSDLGE-CSASPTVEVVASTSVDSAVV 59


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +2

Query: 17  VPVTLMQAQTLQDPVHPAVAALMDTVPTVVMEVYHPPAVPVTLMQAQTLQDPVHRAVAAL 196
           VPV + Q   +  P HP   A    VP  V +VY P   P+ +   Q ++ P+++ +  +
Sbjct: 166 VPVPVFQKVGVPVP-HPVPIA----VPHYV-KVYIPQPYPLQVNVEQPIKIPIYKVIPKV 219

Query: 197 MD-TVPTVVMEVY 232
           ++  VP  V + Y
Sbjct: 220 IEKPVPYTVEKPY 232


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 461 HRRFQHKWRSFFSSASPPKATPRHLKTVF 547
           H R   KW    ++ +PP +  + + TVF
Sbjct: 208 HPRPAEKWTGVLNTTTPPNSCVQIVDTVF 236


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 461 HRRFQHKWRSFFSSASPPKATPRHLKTVF 547
           H R   KW    ++ +PP +  + + TVF
Sbjct: 208 HPRPAEKWTGVLNTTTPPNSCVQIVDTVF 236


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 461 HRRFQHKWRSFFSSASPPKATPRHLKTVF 547
           H R   KW    ++ +PP +  + + TVF
Sbjct: 94  HPRPAEKWTGVLNTTTPPNSCVQIVDTVF 122


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 133 NCRWMIHFHHDCRNCIHKCCYRR 65
           NCR     +H  RN   + CY++
Sbjct: 151 NCRTAARRNHSSRNTCRRNCYQQ 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,732
Number of Sequences: 2352
Number of extensions: 12928
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)