Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0071.Seq
(518 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O18640 Cluster: Guanine nucleotide-binding protein subu... 94 1e-18
UniRef50_P63244 Cluster: Guanine nucleotide-binding protein subu... 89 7e-17
UniRef50_Q25306 Cluster: Guanine nucleotide-binding protein subu... 54 2e-06
UniRef50_Q9AVW0 Cluster: Guanine nucleotide-binding protein beta... 50 2e-05
UniRef50_Q4DTN2 Cluster: Activated protein kinase C receptor, pu... 46 4e-04
UniRef50_Q6FW89 Cluster: Similar to sp|P38011 Saccharomyces cere... 42 0.011
UniRef50_UPI000023D7E6 Cluster: hypothetical protein FG04859.1; ... 37 0.24
UniRef50_Q2UR60 Cluster: WD40 repeat; n=1; Aspergillus oryzae|Re... 37 0.24
UniRef50_Q9ZEM4 Cluster: WD-40 repeat protein; n=4; root|Rep: WD... 36 0.42
UniRef50_Q2BL07 Cluster: Putative uncharacterized protein; n=1; ... 36 0.42
UniRef50_Q1DBR3 Cluster: WD domain G-beta repeat protein; n=1; M... 36 0.73
UniRef50_A7BM33 Cluster: Beta transducin-like protein; n=1; Begg... 36 0.73
UniRef50_A5URP9 Cluster: WD-40 repeat protein; n=1; Roseiflexus ... 36 0.73
UniRef50_Q0HY67 Cluster: WD-40 repeat protein precursor; n=15; S... 35 0.97
UniRef50_A2QIK5 Cluster: Similarity to hypothetical beta transdu... 35 0.97
UniRef50_A6S2Q5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_UPI0000499876 Cluster: WD repeat protein; n=1; Entamoeb... 34 1.7
UniRef50_Q8YL34 Cluster: WD-repeat protein; n=2; Nostocaceae|Rep... 34 1.7
UniRef50_A0D039 Cluster: Chromosome undetermined scaffold_33, wh... 34 2.2
UniRef50_Q8YRI1 Cluster: Uncharacterized WD repeat-containing pr... 34 2.2
UniRef50_Q8YN14 Cluster: WD-repeat protein; n=2; Nostocaceae|Rep... 33 3.0
UniRef50_A7C2D9 Cluster: Serine/Threonine protein kinase with WD... 33 3.0
UniRef50_A0AE97 Cluster: Putative WD-repeat containing protein; ... 33 3.0
UniRef50_UPI000038C710 Cluster: COG2319: FOG: WD40 repeat; n=1; ... 33 3.9
UniRef50_Q8Z019 Cluster: WD-40 repeat protein; n=4; cellular org... 33 3.9
UniRef50_Q7NH82 Cluster: WD-repeat protein; n=1; Gloeobacter vio... 33 3.9
UniRef50_Q112W9 Cluster: WD-40 repeat; n=1; Trichodesmium erythr... 33 3.9
UniRef50_A3GGZ4 Cluster: Predicted protein; n=4; Saccharomycetac... 33 3.9
UniRef50_A7BV18 Cluster: WD-40 repeat protein; n=1; Beggiatoa sp... 33 5.2
UniRef50_A0YQZ5 Cluster: WD-repeat protein; n=1; Lyngbya sp. PCC... 33 5.2
UniRef50_A7S9A6 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.2
UniRef50_A0EG03 Cluster: Chromosome undetermined scaffold_94, wh... 33 5.2
UniRef50_A1DJZ9 Cluster: WD domain protein; n=1; Neosartorya fis... 33 5.2
UniRef50_UPI000038C572 Cluster: COG2319: FOG: WD40 repeat; n=1; ... 32 6.8
UniRef50_Q8Z020 Cluster: WD-40 repeat protein; n=2; Nostocaceae|... 32 6.8
UniRef50_Q3DXZ1 Cluster: WD-40 repeat; n=2; Chloroflexus|Rep: WD... 32 6.8
UniRef50_Q10V31 Cluster: WD-40 repeat; n=1; Trichodesmium erythr... 32 6.8
UniRef50_A7BZD6 Cluster: Serine/Threonine protein kinase with WD... 32 6.8
UniRef50_A2F113 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_Q9UTC7 Cluster: U4/U6 x U5 tri-snRNP complex subunit Pr... 32 6.8
UniRef50_UPI0000E471C1 Cluster: PREDICTED: similar to guanine nu... 32 9.0
UniRef50_Q8Z0R1 Cluster: WD-40 repeat protein; n=2; Nostocaceae|... 32 9.0
UniRef50_Q2JM75 Cluster: WD-repeat/protein kinase domain protein... 32 9.0
UniRef50_Q11AA2 Cluster: Serine/threonine protein kinase with WD... 32 9.0
UniRef50_Q10XR1 Cluster: WD-40 repeat; n=1; Trichodesmium erythr... 32 9.0
UniRef50_A6G7E1 Cluster: Peptidase C14, caspase catalytic subuni... 32 9.0
UniRef50_A3IRL3 Cluster: Peptidase C14, caspase catalytic subuni... 32 9.0
UniRef50_A0YXI8 Cluster: WD-40 repeat protein; n=1; Lyngbya sp. ... 32 9.0
UniRef50_Q7QF60 Cluster: ENSANGP00000014888; n=1; Anopheles gamb... 32 9.0
UniRef50_Q54KH7 Cluster: Transcription initiation factor TFIID s... 32 9.0
UniRef50_A0DL78 Cluster: Chromosome undetermined scaffold_55, wh... 32 9.0
UniRef50_A0DE90 Cluster: Chromosome undetermined scaffold_47, wh... 32 9.0
>UniRef50_O18640 Cluster: Guanine nucleotide-binding protein subunit
beta-like protein; n=18; Eukaryota|Rep: Guanine
nucleotide-binding protein subunit beta-like protein -
Drosophila melanogaster (Fruit fly)
Length = 318
Score = 94.3 bits (224), Expect = 1e-18
Identities = 54/113 (47%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLDRNXIITXLXLLXXQXLXX 337
G G+LNT T SPDGSLC SGGK KA+ WDLNDG +L+TL+ N II L +
Sbjct: 191 GHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDIINALCFSPNRYWLC 250
Query: 336 XCLRTFHQ--DLGSGKQXDG*RAQA*NH*QTXTSKTXPPQCLSLAWSTDGQTL 184
+ DL K + R + + TSK PQCLSLAWSTDGQTL
Sbjct: 251 VAYGPSIKIWDLACKKTVEELRPEV----VSPTSKADQPQCLSLAWSTDGQTL 299
Score = 72.9 bits (171), Expect = 4e-12
Identities = 44/84 (52%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = -1
Query: 371 ALXFSXXRXWXXXAXGPSIKIWDLXSKXMVEELRXEII---NKRXLPRQXLLSVSP*RGL 201
AL FS R W A GPSIKIWDL K VEELR E++ +K P+ L+ S
Sbjct: 239 ALCFSPNRYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQT 298
Query: 200 LMDKPYPAGYSDNTIRVWQVSISA 129
L AGYSDNTIRVWQVS+SA
Sbjct: 299 LF-----AGYSDNTIRVWQVSVSA 317
>UniRef50_P63244 Cluster: Guanine nucleotide-binding protein subunit
beta-2-like 1; n=178; Eukaryota|Rep: Guanine
nucleotide-binding protein subunit beta-2-like 1 - Homo
sapiens (Human)
Length = 317
Score = 88.6 bits (210), Expect = 7e-17
Identities = 54/115 (46%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLDRNXIITXLXLLXXQXLXX 337
G G+LNT T SPDGSLCASGGK +AM WDLN+G HL+TLD II L +
Sbjct: 190 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR--YW 247
Query: 336 XCLRTFHQ----DLGSGKQXDG*RAQA*NH*QTXTSKTXPPQCLSLAWSTDGQTL 184
C T DL D + + + +SK PPQC SLAWS DGQTL
Sbjct: 248 LCAATGPSIKIWDLEGKIIVDELKQEV----ISTSSKAEPPQCTSLAWSADGQTL 298
Score = 65.7 bits (153), Expect = 6e-10
Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = -1
Query: 371 ALXFSXXRXWXXXAXGPSIKIWDLXSKXMVEELRXEII---NKRXLPRQXLLSVSP*RGL 201
AL FS R W A GPSIKIWDL K +V+EL+ E+I +K P+ L+ S
Sbjct: 238 ALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 297
Query: 200 LMDKPYPAGYSDNTIRVWQVSISAR 126
L AGY+DN +RVWQV+I R
Sbjct: 298 LF-----AGYTDNLVRVWQVTIGTR 317
>UniRef50_Q25306 Cluster: Guanine nucleotide-binding protein subunit
beta-like protein; n=22; Trypanosomatidae|Rep: Guanine
nucleotide-binding protein subunit beta-like protein -
Leishmania major
Length = 312
Score = 54.0 bits (124), Expect = 2e-06
Identities = 37/111 (33%), Positives = 53/111 (47%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLDRNXIITXLXLLXXQXLXX 337
G +++T T SPDGSLCASGGK A+ WDL+ G L ++ I + +
Sbjct: 192 GHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINVESPINQIGFSPNR--FW 249
Query: 336 XCLRTFHQDLGSGKQXDG*RAQA*NH*QTXTSKTXPPQCLSLAWSTDGQTL 184
C+ T + L S + A + P +C+S+AWS DG TL
Sbjct: 250 MCVAT-ERSL-SVYDLESKAVIA----ELTPDGAKPSECISIAWSADGNTL 294
Score = 31.9 bits (69), Expect = 9.0
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = -1
Query: 368 LXFSXXRXWXXXAXGPSIKIWDLXSKXMVEELRXEIINKRXLPRQXLLSVSP*RGLLMDK 189
+ FS R W A S+ ++DL SK ++ EL + P + + G +
Sbjct: 241 IGFSPNRFWMCVATERSLSVYDLESKAVIAELTPD----GAKPSECISIAWSADGNTL-- 294
Query: 188 PYPAGYSDNTIRVWQVS 138
Y +G+ DN IRVW +S
Sbjct: 295 -Y-SGHKDNLIRVWSIS 309
>UniRef50_Q9AVW0 Cluster: Guanine nucleotide-binding protein beta SU
like protein; n=1; Guillardia theta|Rep: Guanine
nucleotide-binding protein beta SU like protein -
Guillardia theta (Cryptomonas phi)
Length = 311
Score = 50.4 bits (115), Expect = 2e-05
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLDRNXIITXL 367
G ++ SPDGSLCASGG + WDLN+G HL++L+ N I +
Sbjct: 190 GHKNYVKELAISPDGSLCASGGGDKSIILWDLNEGKHLYSLEINDRIVSI 239
>UniRef50_Q4DTN2 Cluster: Activated protein kinase C receptor,
putative; n=3; Eukaryota|Rep: Activated protein kinase C
receptor, putative - Trypanosoma cruzi
Length = 318
Score = 46.4 bits (105), Expect = 4e-04
Identities = 34/111 (30%), Positives = 46/111 (41%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLDRNXIITXLXLLXXQXLXX 337
G ++ + T SPDGSLCAS K A WDL G L + I + +
Sbjct: 194 GHTNYITSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEMAAGAPINQICFSPNR--YW 251
Query: 336 XCLRTFHQDLGSGKQXDG*RAQA*NH*QTXTSKTXPPQCLSLAWSTDGQTL 184
C T + + Q + KT P+C+S+AWS DG TL
Sbjct: 252 MCAATEKGIRIFDLENKDVIVELAPEAQQKSKKT--PECMSIAWSADGNTL 300
Score = 40.3 bits (90), Expect = 0.026
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -1
Query: 368 LXFSXXRXWXXXAXGPSIKIWDLXSKXMVEELRXEIINK-RXLPRQXLLSVSP*RGLLMD 192
+ FS R W A I+I+DL +K ++ EL E K + P ++ S L
Sbjct: 243 ICFSPNRYWMCAATEKGIRIFDLENKDVIVELAPEAQQKSKKTPECMSIAWSADGNTLY- 301
Query: 191 KPYPAGYSDNTIRVWQVS 138
+GY+DN IRVW VS
Sbjct: 302 ----SGYTDNVIRVWSVS 315
>UniRef50_Q6FW89 Cluster: Similar to sp|P38011 Saccharomyces
cerevisiae YMR116c ASC1; n=1; Candida glabrata|Rep:
Similar to sp|P38011 Saccharomyces cerevisiae YMR116c
ASC1 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 277
Score = 41.5 bits (93), Expect = 0.011
Identities = 26/80 (32%), Positives = 38/80 (47%)
Frame = -1
Query: 371 ALXFSXXRXWXXXAXGPSIKIWDLXSKXMVEELRXEIINKRXLPRQXLLSVSP*RGLLMD 192
AL FS R W A IKI+ L + ++++L+ E +S++
Sbjct: 200 ALSFSPNRYWLCAATASGIKIFSLDPQCLLDDLKPEFAGYTQSAEPHAVSLA---WSSDG 256
Query: 191 KPYPAGYSDNTIRVWQVSIS 132
+ AGY+DN IRVWQV S
Sbjct: 257 QTLFAGYTDNVIRVWQVMTS 276
>UniRef50_UPI000023D7E6 Cluster: hypothetical protein FG04859.1; n=1;
Gibberella zeae PH-1|Rep: hypothetical protein FG04859.1
- Gibberella zeae PH-1
Length = 1491
Score = 37.1 bits (82), Expect = 0.24
Identities = 19/41 (46%), Positives = 22/41 (53%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
G G + + S DGSL ASG K M WD+ G LHTL
Sbjct: 883 GHNGIVESVVFSHDGSLLASGSSDSKVMIWDVLTGTCLHTL 923
>UniRef50_Q2UR60 Cluster: WD40 repeat; n=1; Aspergillus oryzae|Rep:
WD40 repeat - Aspergillus oryzae
Length = 301
Score = 37.1 bits (82), Expect = 0.24
Identities = 17/30 (56%), Positives = 17/30 (56%)
Frame = -3
Query: 483 SPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
SPDG L ASG M WD N G HL TL
Sbjct: 71 SPDGQLVASGSYDNTIMLWDTNTGQHLRTL 100
Score = 31.9 bits (69), Expect = 9.0
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
G G + + + SPD + ASG WD G HL TL
Sbjct: 186 GHSGPVRSVSFSPDSPMIASGSYDNTIKLWDTKTGQHLRTL 226
>UniRef50_Q9ZEM4 Cluster: WD-40 repeat protein; n=4; root|Rep: WD-40
repeat protein - Streptomyces coelicolor
Length = 1049
Score = 36.3 bits (80), Expect = 0.42
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXH 406
G G++NT SPDG ASGG WD+ D H
Sbjct: 843 GHSGYVNTLAFSPDGRTLASGGADDAVRLWDVTDPAH 879
Score = 34.3 bits (75), Expect = 1.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLND 415
GS G + + SPDG ASGG K WD++D
Sbjct: 532 GSTGAVRSVAFSPDGDTLASGGDDDKVRLWDVSD 565
>UniRef50_Q2BL07 Cluster: Putative uncharacterized protein; n=1;
Neptuniibacter caesariensis|Rep: Putative
uncharacterized protein - Neptuniibacter caesariensis
Length = 325
Score = 36.3 bits (80), Expect = 0.42
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 501 LNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
++T SP+ L S G KA+ WDLN G +H L
Sbjct: 204 VDTVAISPNAQLAFSSGSLDKAVIWDLNSGQEIHVL 239
>UniRef50_Q1DBR3 Cluster: WD domain G-beta repeat protein; n=1;
Myxococcus xanthus DK 1622|Rep: WD domain G-beta repeat
protein - Myxococcus xanthus (strain DK 1622)
Length = 786
Score = 35.5 bits (78), Expect = 0.73
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLDR 388
G G + + SPDG+ ASG + A WD+ G LH + R
Sbjct: 162 GHEGEVRSVAWSPDGTRLASGSRDHDARIWDVETGELLHAMTR 204
>UniRef50_A7BM33 Cluster: Beta transducin-like protein; n=1;
Beggiatoa sp. SS|Rep: Beta transducin-like protein -
Beggiatoa sp. SS
Length = 341
Score = 35.5 bits (78), Expect = 0.73
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
G G + + SPD S SGG WD+N G +HTL
Sbjct: 163 GLSGRVYSVAFSPDASRVVSGGHDGTIKVWDINSGNEIHTL 203
>UniRef50_A5URP9 Cluster: WD-40 repeat protein; n=1; Roseiflexus sp.
RS-1|Rep: WD-40 repeat protein - Roseiflexus sp. RS-1
Length = 696
Score = 35.5 bits (78), Expect = 0.73
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLD 391
G G + + SPDG L ASGG+ WD+ G + TL+
Sbjct: 622 GHTGRVLSVAFSPDGRLLASGGRDWTVRLWDVQTGQLVRTLE 663
Score = 34.7 bits (76), Expect = 1.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLD 391
G +N+ SPDG L ASG + WD+ G L TL+
Sbjct: 538 GHTSDVNSVAFSPDGRLLASGARDSTVRLWDVASGQLLRTLE 579
>UniRef50_Q0HY67 Cluster: WD-40 repeat protein precursor; n=15;
Shewanella|Rep: WD-40 repeat protein precursor -
Shewanella sp. (strain MR-7)
Length = 316
Score = 35.1 bits (77), Expect = 0.97
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -3
Query: 510 LGH---LNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLDRNXIITXLXL 361
LGH +NT S DG + +G M+A+ W G +HT D +T + L
Sbjct: 150 LGHKERVNTVALSADGRIALTGSNDMQAILWQAQTGQPIHTWDIGSRVTKVAL 202
>UniRef50_A2QIK5 Cluster: Similarity to hypothetical beta
transducin-like protein het-e1 - Podospora anserina; n=1;
Aspergillus niger|Rep: Similarity to hypothetical beta
transducin-like protein het-e1 - Podospora anserina -
Aspergillus niger
Length = 1553
Score = 35.1 bits (77), Expect = 0.97
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 501 LNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
+ T SPDG L A+G +Y WDL +G HTL
Sbjct: 1094 VQTLAFSPDGQLLATGSRYGILELWDLCEGTLQHTL 1129
>UniRef50_A6S2Q5 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 897
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLDRNXII 376
G L + + + SPDG + ASG + WD+ G L TL+ + ++
Sbjct: 788 GHLDWVRSVSFSPDGKVVASGSRDKTVRLWDVATGESLQTLEGHSVL 834
>UniRef50_UPI0000499876 Cluster: WD repeat protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: WD repeat protein - Entamoeba
histolytica HM-1:IMSS
Length = 406
Score = 34.3 bits (75), Expect = 1.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLDR 388
G G + + SP+G+ SGG K WDLN G L T ++
Sbjct: 187 GHNGSIESLCYSPNGTHLVSGGWDKKVNVWDLNSGSTLQTTEK 229
>UniRef50_Q8YL34 Cluster: WD-repeat protein; n=2; Nostocaceae|Rep:
WD-repeat protein - Anabaena sp. (strain PCC 7120)
Length = 342
Score = 34.3 bits (75), Expect = 1.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 501 LNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
+N SPDG+ A+G + W++NDG +HTL
Sbjct: 229 INAVAISPDGNTLATGIRDNAIKLWNINDGKLIHTL 264
>UniRef50_A0D039 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=2; cellular organisms|Rep:
Chromosome undetermined scaffold_33, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2929
Score = 33.9 bits (74), Expect = 2.2
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAM-XWDLNDGXHLHTLD 391
G LG + + SPDG + ASGG +++ WDL G L LD
Sbjct: 2284 GHLGLITSVAFSPDGLVFASGGGQDQSIRIWDLKSGKELCRLD 2326
>UniRef50_Q8YRI1 Cluster: Uncharacterized WD repeat-containing protein
alr3466; n=2; Nostocaceae|Rep: Uncharacterized WD
repeat-containing protein alr3466 - Anabaena sp. (strain
PCC 7120)
Length = 1526
Score = 33.9 bits (74), Expect = 2.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
G + + SPDG++ ASGG WD++ G L+TL
Sbjct: 1072 GHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTL 1112
Score = 33.5 bits (73), Expect = 3.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHT 397
G +N+ +PDGS+ ASG WD++ LHT
Sbjct: 1240 GHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHT 1279
>UniRef50_Q8YN14 Cluster: WD-repeat protein; n=2; Nostocaceae|Rep:
WD-repeat protein - Anabaena sp. (strain PCC 7120)
Length = 589
Score = 33.5 bits (73), Expect = 3.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
G G + + SPDG A+GG K W+L G LHT+
Sbjct: 427 GHQGRIFSVAMSPDGETFATGGIDKKIKIWNLYTGECLHTI 467
>UniRef50_A7C2D9 Cluster: Serine/Threonine protein kinase with WD40
repeats; n=2; Bacteria|Rep: Serine/Threonine protein
kinase with WD40 repeats - Beggiatoa sp. PS
Length = 309
Score = 33.5 bits (73), Expect = 3.0
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 501 LNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLD 391
+NT SPDGSL A+G W +N HL+TL+
Sbjct: 116 VNTVAFSPDGSLLAAGLWNNTIKVWKVNLAHHLYTLE 152
Score = 32.3 bits (70), Expect = 6.8
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -3
Query: 483 SPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
SPDG L ASG K W++N LHTL
Sbjct: 36 SPDGQLLASGSKDNTIKVWEVNTRKLLHTL 65
>UniRef50_A0AE97 Cluster: Putative WD-repeat containing protein; n=1;
Streptomyces ambofaciens ATCC 23877|Rep: Putative
WD-repeat containing protein - Streptomyces ambofaciens
ATCC 23877
Length = 1418
Score = 33.5 bits (73), Expect = 3.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDG 412
G G++N SPDGS ASG + WD+ G
Sbjct: 1003 GHTGYVNALAFSPDGSTLASGSADARVRLWDMRVG 1037
>UniRef50_UPI000038C710 Cluster: COG2319: FOG: WD40 repeat; n=1;
Nostoc punctiforme PCC 73102|Rep: COG2319: FOG: WD40
repeat - Nostoc punctiforme PCC 73102
Length = 492
Score = 33.1 bits (72), Expect = 3.9
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -3
Query: 513 SLGHLN---TXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
+L HLN T SPDG ASG W L+ G LHTL
Sbjct: 205 TLTHLNWVFTTAISPDGKTLASGSSDNTIKIWHLDTGKLLHTL 247
>UniRef50_Q8Z019 Cluster: WD-40 repeat protein; n=4; cellular
organisms|Rep: WD-40 repeat protein - Anabaena sp.
(strain PCC 7120)
Length = 1711
Score = 33.1 bits (72), Expect = 3.9
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLDRNXII 376
G G + + + SPDG + ASGG W+L +G L TL+ + ++
Sbjct: 1638 GHRGGVRSVSFSPDGKILASGGHDTTVKVWNL-EGIELQTLNLDELL 1683
>UniRef50_Q7NH82 Cluster: WD-repeat protein; n=1; Gloeobacter
violaceus|Rep: WD-repeat protein - Gloeobacter violaceus
Length = 1193
Score = 33.1 bits (72), Expect = 3.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWD 424
G + L + T SPDG A+GG+Y + WD
Sbjct: 871 GRINWLTSGTFSPDGRFVAAGGEYDLVLLWD 901
>UniRef50_Q112W9 Cluster: WD-40 repeat; n=1; Trichodesmium
erythraeum IMS101|Rep: WD-40 repeat - Trichodesmium
erythraeum (strain IMS101)
Length = 464
Score = 33.1 bits (72), Expect = 3.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3
Query: 483 SPDGSLCASGGKYMKAMXWDLNDGXHLHT 397
SPDG + ASG K W+LN G LH+
Sbjct: 187 SPDGEILASGCKKGNIKTWELNTGKELHS 215
>UniRef50_A3GGZ4 Cluster: Predicted protein; n=4;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 485
Score = 33.1 bits (72), Expect = 3.9
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 480 PDGSLCASGGKYMKAMXWDLNDGXHLHTLDRN 385
PDGSL ASGG WD+ G + TL+R+
Sbjct: 311 PDGSLFASGGFDAIGRIWDMRSGRSIVTLERH 342
>UniRef50_A7BV18 Cluster: WD-40 repeat protein; n=1; Beggiatoa sp.
PS|Rep: WD-40 repeat protein - Beggiatoa sp. PS
Length = 367
Score = 32.7 bits (71), Expect = 5.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
G G +N SP+G + ASG W++N G + TL
Sbjct: 243 GHSGDVNAVAFSPNGRIIASGSNDNTVKLWEVNTGKEISTL 283
>UniRef50_A0YQZ5 Cluster: WD-repeat protein; n=1; Lyngbya sp. PCC
8106|Rep: WD-repeat protein - Lyngbya sp. PCC 8106
Length = 580
Score = 32.7 bits (71), Expect = 5.2
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -3
Query: 510 LGH---LNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
+GH ++ SPDG + ASG K W+L G +HTL
Sbjct: 421 IGHSQMVSAIAISPDGKILASGSKDNTIKIWNLETGELIHTL 462
>UniRef50_A7S9A6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 425
Score = 32.7 bits (71), Expect = 5.2
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 435 MXWDLNDGXHLHTLDRNXIITXL 367
M WDLNDG HL+TL II +
Sbjct: 1 MLWDLNDGKHLYTLSGGDIINAM 23
Score = 31.9 bits (69), Expect = 9.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 371 ALXFSXXRXWXXXAXGPSIKIW 306
A+ FS R W A GPSIKIW
Sbjct: 22 AMTFSPNRYWLCAAVGPSIKIW 43
>UniRef50_A0EG03 Cluster: Chromosome undetermined scaffold_94, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_94,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 887
Score = 32.7 bits (71), Expect = 5.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLD 391
G G++ SPDG+ ASG + M WD+ G + L+
Sbjct: 527 GHKGNVKQVCFSPDGTTLASGSRDMSIHLWDVKTGQQMFKLE 568
Score = 31.9 bits (69), Expect = 9.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 504 HLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLD 391
++N+ SPDG+ ASG WD+N G + L+
Sbjct: 741 YVNSVCFSPDGTTLASGSADHSIRLWDVNSGQQMFKLE 778
>UniRef50_A1DJZ9 Cluster: WD domain protein; n=1; Neosartorya
fischeri NRRL 181|Rep: WD domain protein - Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 414
Score = 32.7 bits (71), Expect = 5.2
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -3
Query: 483 SPDGSLCASGGKYMKAMXWDLNDGXHLHTLD 391
SPDG A+GG + K M WD G LD
Sbjct: 349 SPDGRFIAAGGNHEKVMVWDAKTGALKQELD 379
>UniRef50_UPI000038C572 Cluster: COG2319: FOG: WD40 repeat; n=1;
Nostoc punctiforme PCC 73102|Rep: COG2319: FOG: WD40
repeat - Nostoc punctiforme PCC 73102
Length = 1218
Score = 32.3 bits (70), Expect = 6.8
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
G LG + + SPDG L AS WD+N G L TL
Sbjct: 640 GHLGWVWSLAFSPDGQLLASCSSDKTIRLWDVNTGKCLRTL 680
>UniRef50_Q8Z020 Cluster: WD-40 repeat protein; n=2; Nostocaceae|Rep:
WD-40 repeat protein - Anabaena sp. (strain PCC 7120)
Length = 1747
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 507 GHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
G +N+ + SPDG + ASGG+ W +G + TL
Sbjct: 1273 GWVNSISFSPDGKMIASGGEDNLVKLWQATNGHLIKTL 1310
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLN 418
G G +NT SPDG SGG+ M W+L+
Sbjct: 1683 GHPGKINTLAFSPDGKTLLSGGEDAGVMVWNLD 1715
>UniRef50_Q3DXZ1 Cluster: WD-40 repeat; n=2; Chloroflexus|Rep: WD-40
repeat - Chloroflexus aurantiacus J-10-fl
Length = 438
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
G++G +N SPD L A+ G+ W + DG L L
Sbjct: 194 GNIGEINAIDFSPDSQLIAAAGRQHGVRVWRIEDGELLFHL 234
>UniRef50_Q10V31 Cluster: WD-40 repeat; n=1; Trichodesmium
erythraeum IMS101|Rep: WD-40 repeat - Trichodesmium
erythraeum (strain IMS101)
Length = 578
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 501 LNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLDRNXI 379
+N SPDG ASG K + W+L G + T++ N +
Sbjct: 425 VNGIAISPDGQFLASGSKDNQIKLWNLQTGQLVRTINTNSV 465
>UniRef50_A7BZD6 Cluster: Serine/Threonine protein kinase with WD40
repeats; n=1; Beggiatoa sp. PS|Rep: Serine/Threonine
protein kinase with WD40 repeats - Beggiatoa sp. PS
Length = 363
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 513 SLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLDRN 385
+L NT SPDG + ASGG W+++ + TL ++
Sbjct: 208 TLNGKNTIAFSPDGRILASGGANNAITLWEVDTAKEIETLKKH 250
>UniRef50_A2F113 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 525
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -3
Query: 507 GHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLDRN 385
G +NT SP+G A+GG +DL+ G + TLD N
Sbjct: 144 GSINTVAISPNGVFAATGGDDHLINVYDLSKGKKVVTLDGN 184
>UniRef50_Q9UTC7 Cluster: U4/U6 x U5 tri-snRNP complex subunit Prp4
family; n=1; Schizosaccharomyces pombe|Rep: U4/U6 x U5
tri-snRNP complex subunit Prp4 family -
Schizosaccharomyces pombe (Fission yeast)
Length = 462
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 480 PDGSLCASGGKYMKAMXWDLNDGXHLHTLDRN 385
PDGSL +SGG WDL G + LD +
Sbjct: 317 PDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEH 348
>UniRef50_UPI0000E471C1 Cluster: PREDICTED: similar to guanine
nucleotide exchange factor p532; n=3; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to guanine nucleotide
exchange factor p532 - Strongylocentrotus purpuratus
Length = 2138
Score = 31.9 bits (69), Expect = 9.0
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHT 397
G G + T SPDG L ASG W L++G LHT
Sbjct: 2012 GHSGVITHLTFSPDGLLLASGCSEGLVNVWALHEGAVLHT 2051
>UniRef50_Q8Z0R1 Cluster: WD-40 repeat protein; n=2; Nostocaceae|Rep:
WD-40 repeat protein - Anabaena sp. (strain PCC 7120)
Length = 1227
Score = 31.9 bits (69), Expect = 9.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
G + + SPDG L ASG + K WD+ + L TL
Sbjct: 1153 GHTAAIRSVAFSPDGRLLASGSEDEKIQLWDMQNCSRLKTL 1193
>UniRef50_Q2JM75 Cluster: WD-repeat/protein kinase domain protein;
n=2; Synechococcus|Rep: WD-repeat/protein kinase domain
protein - Synechococcus sp. (strain JA-2-3B'a(2-13))
(Cyanobacteria bacteriumYellowstone B-Prime)
Length = 759
Score = 31.9 bits (69), Expect = 9.0
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -3
Query: 513 SLGHLNTXTXSPDGSLCASGGKYM--KAMXWDLNDGXHLHTL 394
+L L SPDG L ASG Y + WDL G L TL
Sbjct: 671 TLSGLAALALSPDGRLLASGTDYRAHQIKLWDLRSGEQLRTL 712
>UniRef50_Q11AA2 Cluster: Serine/threonine protein kinase with WD40
repeats; n=2; Oscillatoriales|Rep: Serine/threonine
protein kinase with WD40 repeats - Trichodesmium
erythraeum (strain IMS101)
Length = 692
Score = 31.9 bits (69), Expect = 9.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTL 394
G L + + SPDG+ AS K WD+N G L+TL
Sbjct: 482 GHLQDVLSVAISPDGNTIASVSKDKTIKLWDINSGLLLYTL 522
>UniRef50_Q10XR1 Cluster: WD-40 repeat; n=1; Trichodesmium
erythraeum IMS101|Rep: WD-40 repeat - Trichodesmium
erythraeum (strain IMS101)
Length = 914
Score = 31.9 bits (69), Expect = 9.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 504 HLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLDRNXIIT 373
++ + SPDG ASG + WD++ G L + D + +IT
Sbjct: 675 NVRSVAISPDGKTLASGSEDGTVKLWDISTGKVLTSFDHSGLIT 718
>UniRef50_A6G7E1 Cluster: Peptidase C14, caspase catalytic subunit
p20; n=1; Plesiocystis pacifica SIR-1|Rep: Peptidase C14,
caspase catalytic subunit p20 - Plesiocystis pacifica
SIR-1
Length = 1781
Score = 31.9 bits (69), Expect = 9.0
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = -3
Query: 513 SLGHLNTXTXSPDGSLCASGG---KYMKAMXWDLNDGXHLHTL 394
S GH++ + +PDG A+GG K KA WD + G LH L
Sbjct: 1014 SFGHIDA-SFAPDGVRLATGGPSGKAGKAEIWDTSTGERLHEL 1055
>UniRef50_A3IRL3 Cluster: Peptidase C14, caspase catalytic subunit
p20; n=1; Cyanothece sp. CCY 0110|Rep: Peptidase C14,
caspase catalytic subunit p20 - Cyanothece sp. CCY 0110
Length = 1523
Score = 31.9 bits (69), Expect = 9.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 507 GHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLD 391
G + SP+G + ASGG WD+ G +HTL+
Sbjct: 1271 GLVRRINFSPEGKILASGGDDGTIKLWDVEKGQLIHTLN 1309
>UniRef50_A0YXI8 Cluster: WD-40 repeat protein; n=1; Lyngbya sp. PCC
8106|Rep: WD-40 repeat protein - Lyngbya sp. PCC 8106
Length = 304
Score = 31.9 bits (69), Expect = 9.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLH 400
G G +NT T SPD + SG + W+L+D + H
Sbjct: 266 GHSGAVNTVTFSPDAKILVSGSEDKTIKLWNLDDLLNYH 304
>UniRef50_Q7QF60 Cluster: ENSANGP00000014888; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000014888 - Anopheles gambiae
str. PEST
Length = 831
Score = 31.9 bits (69), Expect = 9.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDL 421
G + H+N+ SPDGS AS G + WD+
Sbjct: 143 GHMSHVNSVKFSPDGSWIASAGAEGGVIIWDI 174
>UniRef50_Q54KH7 Cluster: Transcription initiation factor TFIID
subunit; n=1; Dictyostelium discoideum AX4|Rep:
Transcription initiation factor TFIID subunit -
Dictyostelium discoideum AX4
Length = 948
Score = 31.9 bits (69), Expect = 9.0
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = -3
Query: 510 LGH---LNTXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLD 391
+GH + T SPDG L A+ G+ + WDL+ G + +D
Sbjct: 802 MGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMD 844
>UniRef50_A0DL78 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_55, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2519
Score = 31.9 bits (69), Expect = 9.0
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 516 GSLGHLNTXTXSPDGSLCASGGKYMKAMXWDLNDG 412
G L ++++ + SPDG + ASG + W++ +G
Sbjct: 2189 GHLNYVSSLSFSPDGEMLASGSRDCSVQLWNVQEG 2223
>UniRef50_A0DE90 Cluster: Chromosome undetermined scaffold_47, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_47, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2171
Score = 31.9 bits (69), Expect = 9.0
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = -3
Query: 507 GHLN---TXTXSPDGSLCASGGKYMKAMXWDLNDGXHLHTLD 391
GH N + SPDGS ASG M WD+ G LD
Sbjct: 1973 GHANAVYSLCFSPDGSTLASGSDDMSIRLWDIKTGLQKQKLD 2014
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 394,694,935
Number of Sequences: 1657284
Number of extensions: 5639761
Number of successful extensions: 13191
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 10950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13180
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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