Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0067.Seq
(568 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 31 0.50
SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10) 31 0.50
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_36932| Best HMM Match : HTH_8 (HMM E-Value=1.4) 29 2.0
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_32504| Best HMM Match : TolA (HMM E-Value=0.52) 29 2.0
SB_21286| Best HMM Match : DUF352 (HMM E-Value=0.47) 29 2.6
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 29 2.6
SB_19628| Best HMM Match : DUF1542 (HMM E-Value=8.3) 29 2.6
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_24372| Best HMM Match : Ribosomal_L24e (HMM E-Value=8.5e-40) 29 3.5
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13) 29 3.5
SB_18623| Best HMM Match : HC2 (HMM E-Value=0.49) 28 4.6
SB_58913| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 28 6.1
SB_23786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1) 28 6.1
SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 28 6.1
SB_26666| Best HMM Match : Pkinase (HMM E-Value=3.7e-38) 28 6.1
SB_21765| Best HMM Match : Exonuc_X-T (HMM E-Value=1.9e-09) 28 6.1
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 28 6.1
SB_26383| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_11401| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = -1
Query: 250 NQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 92
N+ + K KK K +M+K +K ++ T DPP + R K R + G+ +S S
Sbjct: 1089 NKSKKKSKKDKKSMKKASKHRKETGDPPML-RAKIRGIGSPVSGSFQRTISES 1140
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 31.5 bits (68), Expect = 0.50
Identities = 13/51 (25%), Positives = 29/51 (56%)
Frame = -1
Query: 256 RRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSR 104
RRN + KE+ R ++ +R+ ++ P++++ + K+Q+K + SR
Sbjct: 247 RRNSQRHKERSRYHRSRSRSRHRRSRSNSPSMRKSDRKFKKSQRKSRSRSR 297
>SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10)
Length = 574
Score = 31.5 bits (68), Expect = 0.50
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = -1
Query: 232 EKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 92
+K +K +KT+K ++ PN +R++++ K +KK ASS++ P+
Sbjct: 367 KKGTKRGKKKTSKDATEESEAPNKKRKEKK--KKKKKKKASSKIEPT 411
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 30.7 bits (66), Expect = 0.87
Identities = 23/110 (20%), Positives = 47/110 (42%)
Frame = -1
Query: 451 EKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSIGKN 272
E+E + + +R E EER E +E + +++ ++ K
Sbjct: 443 EEERRREEEERREEEERKREEEERKQREEEEKKREEEERKQREEEERKQKEKEEEKKRKE 502
Query: 271 GISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 122
E R +E +EKK++ + + +G+R ++E+ER + +KK
Sbjct: 503 ----EERKHKEEEEKKTEESYDDSWRGRRARRKAEEERKERERRERLEKK 548
>SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1331
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = -1
Query: 283 IGKNGISAERRNQREVKEKKSKANMRKTTKGK--RTTADPPNIQREKERVWKNQKKGTAS 110
+ K + E QR K + + NMR+ + G ++ AD P QR ++ K+ +KG +
Sbjct: 235 VPKKSLKDENDLQRAPKRRNWRKNMRRPSSGSIGQSMADSP--QRGTPQLSKSDRKGEKT 292
Query: 109 SRLSPSRWVNPA*RSR 62
++ + V PA S+
Sbjct: 293 AKGKEIKRVIPAGESK 308
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -1
Query: 259 ERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERV 140
E++ +E KEK+ + K K K+ + +QR+KER+
Sbjct: 352 EKQKHQEKKEKERQREKEKLEKEKQKELERKELQRQKERM 391
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 259 ERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 122
ER +R +EK+ + R+ K K QREKE++ K ++K
Sbjct: 332 EREKERIQQEKEKQKERREKEKQKHQEKKEKERQREKEKLEKEKQK 377
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -1
Query: 259 ERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 122
ER+ Q ++++K K + + K + IQ+EKE+ + ++K
Sbjct: 306 ERKRQEKLEQKAKKKEKERQEREKEKEREKERIQQEKEKQKERREK 351
>SB_36932| Best HMM Match : HTH_8 (HMM E-Value=1.4)
Length = 721
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/88 (17%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = -1
Query: 259 ERRNQREVKEKKSKANMRKTTKGK--RTTADPPNIQREKERVWKNQKKGTASSRLSPSRW 86
E ++E + K+++ M++ K K + P ++ + A ++SPS
Sbjct: 83 EEELRKETQRKQARNRMQELRKRKLAEESGPEPEVEFMTPAFSSRMTRKRAKDKVSPSLP 142
Query: 85 VNPA*RSRIIQNRIPTRKSRNWKRKRNM 2
+PA ++ +++N + + +++ ++N+
Sbjct: 143 TSPAKKAEVLENLVNSPRTKKILERKNV 170
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 29.5 bits (63), Expect = 2.0
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = -1
Query: 277 KNGISAERRNQREVKEKKSKANMRKTTKGK-RTTADPPNIQREKERVWKNQKKGTASSRL 101
K+ S R R +S+ R ++ + R P R K + + + SR
Sbjct: 141 KSRSSRRRYRSRSDSRPRSRYRGRSRSRSRDRYRERRPRKSRSKSLDRSRRSRSRSYSRP 200
Query: 100 SPSRWVNPA*RSRIIQNRIPTRKSRNWKRKR 8
SPS + + RSR ++R +R+SR+ R R
Sbjct: 201 SPSPYRSRRSRSRTRRSRSRSRRSRSRSRDR 231
>SB_32504| Best HMM Match : TolA (HMM E-Value=0.52)
Length = 422
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = -1
Query: 301 THDKFSIGKNGISAERRNQREVKEKKS---KANMRKTTKGK-RTTADPPNIQREKERVWK 134
T + + + I ++++ +E+KE+K K M+K K K +T + ++EKE+ K
Sbjct: 112 TENHSLLEEKDIPRDKKSDKELKEEKKEKEKERMKKEEKHKEKTRKEEKEREKEKEKTKK 171
Query: 133 NQKK 122
+K+
Sbjct: 172 EEKE 175
>SB_21286| Best HMM Match : DUF352 (HMM E-Value=0.47)
Length = 690
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 283 IGKNGISAERRNQREVKEKKSKANMRKTTKGKRTT 179
IG N +A ++ + K++ +K R TTK RTT
Sbjct: 560 IGDNNATAGYQSTKRAKKRSTKTRKRLTTKQSRTT 594
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 259 ERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 122
ER ++E KEK+ +A K K + D + + EK+R K ++K
Sbjct: 956 ERLREKEEKEKQKEAERAKKEKERLLQEDKLHEKEEKDRKDKEKRK 1001
>SB_19628| Best HMM Match : DUF1542 (HMM E-Value=8.3)
Length = 104
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = -1
Query: 307 RRTHDKFSIGK-NGISAERRNQ-REVKEKKSKANMRKTTKG--KRTTADPPNIQREKERV 140
+++ D+F G + A +N ++V + K+N+RK K +++ P + R ++R
Sbjct: 29 KKSWDQFKEGPIKRLGATTKNMAKKVALDQPKSNIRKIVKKILEQSKRWPESSGRNQKRS 88
Query: 139 WKNQKKG 119
W NQK G
Sbjct: 89 WSNQKDG 95
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -1
Query: 262 AERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTA 113
A+ + E KEK A R + +GK+ Q +K K +KK A
Sbjct: 927 ADEQPAEEAKEKSKPAGRRASRRGKKQATQVEESQEDKTDAEKEKKKPKA 976
>SB_24372| Best HMM Match : Ribosomal_L24e (HMM E-Value=8.5e-40)
Length = 154
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -1
Query: 256 RRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSR 89
R+ QRE + +K R K+ T P QR+K + KN K+ A R+ R
Sbjct: 101 RKAQREQAIRAAKEKQRAKASTKKPTTAQPAAQRQKAQ--KNVKQMAAKPRVGGKR 154
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = -1
Query: 262 AERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWV 83
A + +R KEK SK + +GK T PP++ ++ + Q T +S PS
Sbjct: 3168 AASKRKRNTKEKNSKLPLPSVPEGKILTDIPPSLPSTASQIGE-QVVNTRTSSNEPSLPE 3226
Query: 82 NPA 74
PA
Sbjct: 3227 APA 3229
>SB_49531| Best HMM Match : C2 (HMM E-Value=2.9e-13)
Length = 752
Score = 28.7 bits (61), Expect = 3.5
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = -1
Query: 292 KFSIGKNGISAERRNQREV--KEKKSKANMRKTTKGKRTTADPPNIQREKERVW--KNQK 125
KF K + E ++RE KEK K + + TT DPP + K + W K+ K
Sbjct: 356 KFRRSKKASATEENDEREQENKEKNKVEEEEKKSDNEETTPDPPKSRFGKFK-WARKDDK 414
Query: 124 KGTASS 107
K S
Sbjct: 415 KDEGDS 420
>SB_18623| Best HMM Match : HC2 (HMM E-Value=0.49)
Length = 384
Score = 28.3 bits (60), Expect = 4.6
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -1
Query: 271 GISAERRNQREVKEKKSKANMRK-TTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSP 95
G R++ + K+SK N +K T K +R+ + ++ER N +KGT S
Sbjct: 275 GTLKRERSKGNPQRKRSKGNAQKGTLKRERSKGNAQKGTLKRERSKGNAQKGTLKRECSK 334
Query: 94 SRWVNPA*RSRIIQNR 47
P R+ +I++R
Sbjct: 335 GN--APRNRNLVIKSR 348
>SB_58913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -1
Query: 286 SIGKNGISAERRNQREVKEKKSKANMR----KTTKGKRTTADPPNIQREKERVWKNQKKG 119
++ K+ S+E+ N+R + KS++ R ++ G + A P N + + +W + +G
Sbjct: 133 TVDKSWESSEKENKRPINATKSESRKRGNEHDSSSGVGSIAGPSNSKAPRNTLWNHTGEG 192
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -1
Query: 253 RNQREVKEKKSKANMRKTTKGKRTTADPPNIQRE--KERVWKNQKKGTASSRLSPSRWVN 80
+ ++E +EKK + +KT + + +P N +++ RV + Q + R +P
Sbjct: 696 KKKKEKREKKERKREKKTRRARTPVEEPENFEKDVPLPRVHEEQDQVEKEHRRTPDGTQE 755
Query: 79 P 77
P
Sbjct: 756 P 756
>SB_23786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 27.9 bits (59), Expect = 6.1
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = -1
Query: 265 SAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRW 86
+ R++++E++ K N K K K+TT + EK+R K G S R W
Sbjct: 92 TVRRKSRQEIQTHKRTKN-NKHRKAKKTTQTIEWRREEKQRRKPRVKTG-KSDRNQQESW 149
Query: 85 VNPA*RSRIIQNRIPTRKS 29
P + +Q RKS
Sbjct: 150 KKPREKKIELQRENLARKS 168
>SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1)
Length = 210
Score = 27.9 bits (59), Expect = 6.1
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = -1
Query: 442 GYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSIGKNGIS 263
G K +++ EE ++ +D+D D + ++ +K K+
Sbjct: 32 GRKPKEGKDDSEEEEDDN-DDDDGDIEGDEEADEPPKKKKKAESKPKSAEKSKSSKSKTP 90
Query: 262 AERRNQREVKE--KKSKANMRKTTKGKRTTADPP 167
A++ ++E K+ KKSK K T GK+T P
Sbjct: 91 AKKETKKESKKSPKKSKPVTVKITSGKKTPKKSP 124
>SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 599
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 277 KNGISAERRNQREVKEKKSKANMRKTTK-GKRTTADPPNIQREKERVWKNQKK 122
K G ER +RE KE++ K ++ K K+ +R+KER + +K+
Sbjct: 27 KGGKRDEREQEREKKERRKKERKKERKKERKKERKKEKKKERKKERKEERKKE 79
>SB_26666| Best HMM Match : Pkinase (HMM E-Value=3.7e-38)
Length = 1215
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = -1
Query: 283 IGKNGISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSR 104
+ N + + + R++ + N++ + PN +E V+K+ KG SS
Sbjct: 969 VAVNNVLTSQNHARDMLNNNN-INLKNADNASLLRSLSPNGTIGQEPVFKSSSKGDLSSE 1027
Query: 103 LSPS 92
LSPS
Sbjct: 1028 LSPS 1031
>SB_21765| Best HMM Match : Exonuc_X-T (HMM E-Value=1.9e-09)
Length = 460
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -1
Query: 283 IGKNGISAERRNQREVKEKKSKANMRKT----TKGKRTTADPPNIQREKERVWKNQKKG 119
IG + S+E+ N+R + KS++ R + G + A P N + + +W + +G
Sbjct: 43 IGNSWESSEKENKRPINATKSESRKRGNEHDLSSGVGSIAGPSNSKAPRNTLWNHTGEG 101
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -1
Query: 259 ERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKN 131
E ++E KEK+ + +K+ K K A P + K+ W N
Sbjct: 271 EEWEEQERKEKERQERKQKSIKEKEVIAWPWKVGHSKDEPWHN 313
>SB_26383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1142
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -1
Query: 259 ERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 122
ER++ +V++K M K T + PN+++ + R ++QKK
Sbjct: 571 ERKDDSKVEKKSRTLKMIKQTFRRTKNIRLPNLKKRERRQKRHQKK 616
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = -1
Query: 307 RRTHDKFSIGKNGISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQ 128
RR + + + G + E R +R K+KK K K + A+ +REKE +++
Sbjct: 169 RRAKEIWEKNETGETKEERKKRH-KDKKKKREESKERRRHSDKAEKSERKREKEEKKRDK 227
Query: 127 KKGTASSR 104
+ SR
Sbjct: 228 SEKRERSR 235
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = -1
Query: 277 KNGISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLS 98
K+G ++ ++ KE++S + +K + +++ + + K KN+ K S S
Sbjct: 1752 KHGFPWKKEGKKNKKEERSLSPSKKKEESPESSSKKSSSWKSKLFGPKNKDKKQRSRSQS 1811
Query: 97 PSRWVNP 77
P R V+P
Sbjct: 1812 PGRVVSP 1818
>SB_11401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1
Query: 415 EYEERGSEHQEDNDSD 368
EYEER EH+ED D
Sbjct: 271 EYEERNDEHEEDRHED 286
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,712,697
Number of Sequences: 59808
Number of extensions: 163972
Number of successful extensions: 1066
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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