Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0067.Seq
         (568 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    28   0.18 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    28   0.18 
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       24   3.0  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   3.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   5.3  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   6.9  
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        23   9.2  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 28.3 bits (60), Expect = 0.18
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
 Frame = -1

Query: 277 KNGISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKN--QKKGTASSR 104
           +NG   + R+  ++KE  S   M + +     T DP  I R       N  Q++ +  S 
Sbjct: 661 QNGSMTKTRSYSDIKEATSGGVMARRSSDPSMTLDPSIINRTGGPATLNLSQEESSIDSN 720

Query: 103 LSPSRWVNP 77
           LS  R  +P
Sbjct: 721 LSSDRETSP 729


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 28.3 bits (60), Expect = 0.18
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
 Frame = -1

Query: 277 KNGISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKN--QKKGTASSR 104
           +NG   + R+  ++KE  S   M + +     T DP  I R       N  Q++ +  S 
Sbjct: 661 QNGSMTKTRSYSDIKEATSGGVMARRSSDPSMTLDPSIINRTGGPATLNLSQEESSIDSN 720

Query: 103 LSPSRWVNP 77
           LS  R  +P
Sbjct: 721 LSSDRETSP 729


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -1

Query: 274 NGISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREK 149
           NG S   R Q+    KK+  +   T  G  +T  PP IQ EK
Sbjct: 70  NGFSDSERKQKIEDIKKNIRDAILTITGAMSTLTPP-IQLEK 110


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 354  KVPNTKNTVKRKSMKNVGPTT 292
            K PNT   + ++S+KN  P T
Sbjct: 1699 KAPNTATDIMQRSLKNKCPNT 1719


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 14/54 (25%), Positives = 19/54 (35%)
 Frame = -1

Query: 307 RRTHDKFSIGKNGISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKE 146
           R   D +   K  ++   +   EVK K S  N          T D P+    KE
Sbjct: 751 RLLEDAYQSAKKTLANVEKKLAEVKAKSSDKNSTARALCANKTPDKPDFPYRKE 804


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = -1

Query: 280 GKNGISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKG 119
           G +     R + +++  +K ++    +TKG+ T A  PNI       W ++K G
Sbjct: 829 GVSNAGLSRSSAKQLSMRKWQSEWDCSTKGRTTHALIPNI-----AAWTSRKHG 877


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 178 ADPPNIQREKERVWKNQK 125
           ADP N QR K   W N +
Sbjct: 109 ADPKNPQRLKVSTWHNMR 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 337,279
Number of Sequences: 2352
Number of extensions: 4929
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)