Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0067.Seq
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 37 0.009
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 35 0.047
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 33 0.11
AF036706-12|AAK39280.1| 343|Caenorhabditis elegans Hypothetical... 33 0.19
Z81086-4|CAB03117.1| 342|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL132949-23|CAB70113.2| 152|Caenorhabditis elegans Hypothetical... 30 1.3
AL132949-6|CAB70102.1| 152|Caenorhabditis elegans Hypothetical ... 30 1.3
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 30 1.3
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 30 1.3
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 30 1.3
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 30 1.3
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 30 1.3
Z49911-2|CAA90130.1| 681|Caenorhabditis elegans Hypothetical pr... 29 1.8
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 29 1.8
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical p... 29 3.1
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 29 3.1
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 29 3.1
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 29 3.1
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 29 3.1
AL132948-8|CAC51068.1| 230|Caenorhabditis elegans Hypothetical ... 29 3.1
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 29 3.1
Z75546-6|CAA99894.1| 155|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z70270-7|CAH04652.1| 175|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 28 5.4
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 27 7.1
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 27 7.1
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 27 7.1
U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical pr... 27 7.1
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 27 7.1
Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical pr... 27 9.4
U64858-5|AAB18284.1| 409|Caenorhabditis elegans Hypothetical pr... 27 9.4
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 27 9.4
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 27 9.4
AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical ... 27 9.4
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 37.1 bits (82), Expect = 0.009
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Frame = -1
Query: 451 EKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSIGKN 272
+K+G K + ++ + E++ + +ED+ D E + DK K+
Sbjct: 81 KKDGDKKEEEKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKD 140
Query: 271 GISAERRNQREVKEKKSK--ANMRKTTKGKRTTADPPNIQREKERVWKNQKK 122
E++++++ K KKSK + +K+ K KR D + +K+ K K
Sbjct: 141 EKKDEKKDEKKEKSKKSKKSSKSKKSKKSKREKKDEEKKEDDKKEDDKKDDK 192
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical
protein T26A5.5a protein.
Length = 1076
Score = 34.7 bits (76), Expect = 0.047
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Frame = -1
Query: 442 GYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSIGKNGIS 263
G + D + EY+ E QE+ + D RR+ + S KN S
Sbjct: 606 GQRDDQEEEEYDAEEPEDQEEEEED-------EYQAEEYTPTPVTRRSSSRRSGAKNDES 658
Query: 262 AE---RRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERV 140
E +++++E EK K R+ +K K+ ++E+ER+
Sbjct: 659 EEVSVKKDKKEKMEKVEKDEKRRNSKSKKDKISKEKKKKERERI 702
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 33.5 bits (73), Expect = 0.11
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Frame = -1
Query: 451 EKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSIGKN 272
+K+G K + ++ + E++ + +ED+ D E + DK K+
Sbjct: 81 KKDGDKKEEEKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDK----KD 136
Query: 271 GISAERRNQREVKEKKSK--ANMRKTTKGKRTTADPPNIQREKERVWKNQKK 122
E++++++ K KKSK + +K+ K KR D + +K+ K K
Sbjct: 137 EKKDEKKDEKKEKSKKSKKSSKSKKSKKSKREKKDEDKKEDDKKEDDKKDDK 188
>AF036706-12|AAK39280.1| 343|Caenorhabditis elegans Hypothetical
protein T07A9.8 protein.
Length = 343
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = -1
Query: 277 KNGISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQ-KKGTASSRL 101
K I+ E+ Q EK+ K ++ T+ + +++K+R W+N+ +K A
Sbjct: 4 KRKITDEKDAQHVPAEKREKVENWLKKSTEKPTSSQSDAEKKKKRPWRNKVRKLAAKKAA 63
Query: 100 SPSRWVNPA*RSRIIQNRIPTRKSRNWKRKR 8
+ + NP I++ + + ++ KRKR
Sbjct: 64 ADKKSENPEEPPLILEPKSSSDENTKKKRKR 94
>Z81086-4|CAB03117.1| 342|Caenorhabditis elegans Hypothetical
protein F53B6.4 protein.
Length = 342
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -1
Query: 304 RTHDKFSIGKNGISAERRNQREVKEKKSKANMRKTTKGKR--TTADPPNIQREKERVWKN 131
++ K + GK+G + +R + K KSK TT G + T + + ++ K+
Sbjct: 114 KSSKKGTSGKSGKGSSKRGGKSSKSSKSKKVKTATTSGSQVSTVSAATGVSDKQSNSSKS 173
Query: 130 QKKGTASSRLSPSR 89
+K + SS+ +R
Sbjct: 174 SRKSSKSSKSRKNR 187
>AL132949-23|CAB70113.2| 152|Caenorhabditis elegans Hypothetical
protein Y53F4B.26 protein.
Length = 152
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = -1
Query: 307 RRTHDK-FSIGKNGI-SAERRNQREVKEKKSKANM---RKTTKGKRTTADPPNIQREKER 143
RRT + S N + ERR++ +E +S+ M RK K + + + K+R
Sbjct: 45 RRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKR 104
Query: 142 VWKNQKKGTASSRLSPSRWVNP 77
VW +K+ + S NP
Sbjct: 105 VWMKKKRNEVAKTHDTSSVANP 126
>AL132949-6|CAB70102.1| 152|Caenorhabditis elegans Hypothetical
protein Y53F4B.7 protein.
Length = 152
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = -1
Query: 307 RRTHDK-FSIGKNGI-SAERRNQREVKEKKSKANM---RKTTKGKRTTADPPNIQREKER 143
RRT + S N + ERR++ +E +S+ M RK K + + + K+R
Sbjct: 45 RRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKR 104
Query: 142 VWKNQKKGTASSRLSPSRWVNP 77
VW +K+ + S NP
Sbjct: 105 VWMKKKRNEVAKTHDTSSVANP 126
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -1
Query: 265 SAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASS 107
S+E + E +E+KSK +KT K+ T+ + + E+ER K KK S
Sbjct: 126 SSEDEDSDEEREQKSKKKSKKT---KKQTSSESSEESEEERKVKKSKKNKEKS 175
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -1
Query: 262 AERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 92
+ ++ E K KKSK N K+ K + T++ + E E+ K KKG S S
Sbjct: 155 SSEESEEERKVKKSKKNKEKSVKKRAETSEESD---EDEKPSKKSKKGLKKKAKSES 208
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = -1
Query: 307 RRTHDK-FSIGKNGI-SAERRNQREVKEKKSKANM---RKTTKGKRTTADPPNIQREKER 143
RRT + S N + ERR++ +E +S+ M RK K + + + K+R
Sbjct: 45 RRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKR 104
Query: 142 VWKNQKKGTASSRLSPSRWVNP 77
VW +K+ + S NP
Sbjct: 105 VWMKKKRNEVAKTHDTSSVANP 126
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -1
Query: 265 SAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASS 107
S+E + E +E+KSK +KT K+ T+ + + E+ER K KK S
Sbjct: 126 SSEDEDSDEEREQKSKKKSKKT---KKQTSSESSEESEEERKVKKSKKNKEKS 175
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -1
Query: 262 AERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPS 92
+ ++ E K KKSK N K+ K + T++ + E E+ K KKG S S
Sbjct: 155 SSEESEEERKVKKSKKNKEKSVKKRAETSEESD---EDEKPSKKSKKGLKKKAKSES 208
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = -1
Query: 307 RRTHDK-FSIGKNGI-SAERRNQREVKEKKSKANM---RKTTKGKRTTADPPNIQREKER 143
RRT + S N + ERR++ +E +S+ M RK K + + + K+R
Sbjct: 45 RRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKR 104
Query: 142 VWKNQKKGTASSRLSPSRWVNP 77
VW +K+ + S NP
Sbjct: 105 VWMKKKRNEVAKTHDTSSVANP 126
>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
protein F59H6.5 protein.
Length = 1486
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = -1
Query: 307 RRTHDK-FSIGKNGI-SAERRNQREVKEKKSKANM---RKTTKGKRTTADPPNIQREKER 143
RRT + S N + ERR++ +E +S+ M RK K + + + K+R
Sbjct: 45 RRTRSRTLSDNSNAVWKRERRSRETSQESESRLRMDWERKKEKRASMSEEEKAEMKYKKR 104
Query: 142 VWKNQKKGTASSRLSPSRWVNP 77
VW +K+ + S NP
Sbjct: 105 VWMKKKRNEVAKTHDTSSVANP 126
>Z49911-2|CAA90130.1| 681|Caenorhabditis elegans Hypothetical
protein M28.2 protein.
Length = 681
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -1
Query: 304 RTHDKFSIGKNGISAERRNQREVKEKKSKANMRKTTKGKRTTADP 170
RTH K ++GKNG S + +++ SK +K K K+ A+P
Sbjct: 635 RTHSKNTVGKNGKSDKTGTSGSMEKAGSKEKDKKKKK-KKDKANP 678
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -1
Query: 298 HDKFSIGKNGISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERV 140
H K + I AERR+QRE KE+++ M K +R A+ + EK ++
Sbjct: 2217 HGKRRLDAEDIFAERRSQRERKEREAYGRM-TGAKYRRELANTEKQEIEKMKI 2268
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 247 QREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQK 125
+R+ KEK K M T K K+ D ++EKER+ K +K
Sbjct: 235 ERKEKEKVEKNKMEMTEKIKKKDEDE-KAKKEKERIDKEEK 274
>Z75547-12|CAN99725.1| 141|Caenorhabditis elegans Hypothetical
protein K10C8.3b protein.
Length = 141
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/64 (23%), Positives = 33/64 (51%)
Frame = -1
Query: 268 ISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSR 89
+SA ++++ K K ++ ++ +R+ PN ++EK R + G++S + +
Sbjct: 10 LSASESSRKKSKSVKRCSSCKRPNSTRRSKTPDPNSEKEKVR----NRSGSSSKKEKKNS 65
Query: 88 WVNP 77
VNP
Sbjct: 66 LVNP 69
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = -1
Query: 283 IGKNGISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSR 104
+G+NG +RR R + ++S + R+ R + +R ++R +++ + R
Sbjct: 263 MGRNGDDRDRRRSRSPRRRRSPSPRRRRDSRDRDRDRDRDRRRSRDRRSRSRDRDRDRDR 322
Query: 103 LSPSRWVNPA*RSRIIQNRIPTRK-SRNWKRKR 8
SR + RSR N+ RK SR+ R+R
Sbjct: 323 -KRSRSRDRKRRSRSRDNKDRDRKRSRSRDRRR 354
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 28.7 bits (61), Expect = 3.1
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = -1
Query: 283 IGKNGISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSR 104
+G+NG +RR R + ++S + R+ R + +R ++R +++ + R
Sbjct: 263 MGRNGDDRDRRRSRSPRRRRSPSPRRRRDSRDRDRDRDRDRRRSRDRRSRSRDRDRDRDR 322
Query: 103 LSPSRWVNPA*RSRIIQNRIPTRK-SRNWKRKR 8
SR + RSR N+ RK SR+ R+R
Sbjct: 323 -KRSRSRDRKRRSRSRDNKDRDRKRSRSRDRRR 354
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = -1
Query: 235 KEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWVNPA*RSRII 56
KEKKSK + +K K + +++ + ER K ++ + R PS P RSR
Sbjct: 122 KEKKSKKDKKKKKKKRSSSSSDESSDERVER--KRRRSPSPKRRRRPSE--KPRKRSRSP 177
Query: 55 QNRIPTRKSRNWKRKRNM 2
+ P R+ + R +
Sbjct: 178 RRERPRSPKRSREESRKL 195
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = -1
Query: 235 KEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSPSRWVNPA*RSRII 56
KEKKSK + +K K + +++ + ER K ++ + R PS P RSR
Sbjct: 122 KEKKSKKDKKKKKKKRSSSSSDESSDERVER--KRRRSPSPKRRRRPSE--KPRKRSRSP 177
Query: 55 QNRIPTRKSRNWKRKRNM 2
+ P R+ + R +
Sbjct: 178 RRERPRSPKRSREESRKL 195
>AL132948-8|CAC51068.1| 230|Caenorhabditis elegans Hypothetical
protein Y39B6A.9 protein.
Length = 230
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Frame = -1
Query: 451 EKEGYKSD-YDRNEYEERGSEHQEDN----DSDXXXXXXXXXXXXXXXXXXXERRTHDKF 287
+K Y SD Y+ ++++ + S H EDN D ++ HDK+
Sbjct: 127 QKGYYGSDGYEHDDHKSKYSSHNEDNGFKKGYDGAGAGHDDKYTSYDKEDAGHKKHHDKY 186
Query: 286 SIGKNGISAERRNQREVKEKKSKANMRKTTKGKR 185
IGK G + + ++ E+ K +K + G R
Sbjct: 187 DIGKYG-AKQGGYAKQGHEEGWKNEAQKNSYGSR 219
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 259 ERRNQREVKEKKSKANMRKTTKGKRTTAD-PPNIQREKERVWKNQKK 122
ERR ++ K KKSK +K+ K KR D + + E+E+ K KK
Sbjct: 255 ERRRKKSKKSKKSK-KFKKSEKRKRAVNDSSSDDEDEEEKPEKRSKK 300
>Z75546-6|CAA99894.1| 155|Caenorhabditis elegans Hypothetical
protein R05D11.7 protein.
Length = 155
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -1
Query: 265 SAERRNQREVKEKKSKANMR-KTTKGKRTTADPPNIQREKERVWKNQKK 122
S ERR+ R+ +++K K + R ++ + KR + + KER + QKK
Sbjct: 29 SRERRDARKNRDEKEKRSSRSRSPRDKRDRRERSRSRDRKERDRERQKK 77
>Z70270-7|CAH04652.1| 175|Caenorhabditis elegans Hypothetical
protein C53D6.10 protein.
Length = 175
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 277 KNGISAERRNQREVKEKKSKANMRKTTKG 191
KNG S+E + + +VK+ KSKA+ ++ G
Sbjct: 90 KNGKSSETKTKNKVKKNKSKASADESQMG 118
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 27.9 bits (59), Expect = 5.4
Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 2/119 (1%)
Frame = -1
Query: 466 EGLTLEKEGYKSDYDRNEYEERGSEHQEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKF 287
E L+K+ K D++ E GSE ++ DS ++ K
Sbjct: 473 EDYDLDKDMKKQKNDKDSSEGSGSEPDDEYDSGSEKDASGTGESDPDEENIEPKKKESK- 531
Query: 286 SIGKNGISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKER--VWKNQKKGT 116
E++N+RE KEK K K KGK+ T DP +R +W N + +
Sbjct: 532 ---------EKKNKREKKEKPVKEKAVK--KGKK-TKDPNEPKRATTAYIIWFNANRNS 578
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 27.5 bits (58), Expect = 7.1
Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 6/120 (5%)
Frame = -1
Query: 451 EKEGYKSDYDRNEYEERGSEHQED---NDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSI 281
EK+ +++ ++NE E++ E +ED D +++ K
Sbjct: 65 EKDKEEAEKEKNEKEKKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDKKEESKEDK 124
Query: 280 GKNGISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREK---ERVWKNQKKGTAS 110
+ + + + E K+K+ K + + K T D ++EK E+V ++ KK S
Sbjct: 125 KEKTKTEDNEGKNEEKKKEKKEEKKDEKEKKEKTEDDKEKEKEKTKEEKVKEDPKKDDKS 184
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 27.5 bits (58), Expect = 7.1
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -1
Query: 463 GLTLEKEGYKSDYDRNEYEERGSEHQEDNDSD 368
G +K D D EY+++ S+ +E+N+++
Sbjct: 600 GAEEKKRNQSDDDDEKEYDDKDSDEEEENEAE 631
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 27.5 bits (58), Expect = 7.1
Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 1/122 (0%)
Frame = -1
Query: 451 EKEGYKSDYDRNEYEERGSEH-QEDNDSDXXXXXXXXXXXXXXXXXXXERRTHDKFSIGK 275
++E K+D ++ + EE+ + ++ + D ER+ DK K
Sbjct: 80 KEEEKKADDEKKKTEEKDDKKSKKTEEKDKLSVKKTQETKSERKDKKDERKEDDKKEENK 139
Query: 274 NGISAERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKKGTASSRLSP 95
E + + EVK+KK M G++ + K+ K +KK +P
Sbjct: 140 EKSKDEEKKKDEVKDKKEDEKMDDKKPGEKEEKKEEFKKEMKKEEKKEEKKEEPKKNDAP 199
Query: 94 SR 89
+
Sbjct: 200 KK 201
>U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical
protein C46A5.1 protein.
Length = 497
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -1
Query: 277 KNGISAERRNQREVKEKKSKANMRKTTKGK-RTTADPPNIQREKERVWKNQK 125
KNG+S R+ +++ K+ KSK ++ K + A PN Q + + KN K
Sbjct: 46 KNGLSCCRKKKKKSKKSKSKVTKKQPKKKVIKPLAPVPNEQLGEVVLVKNVK 97
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 256 RRNQREVKEKKSKANMRKTTKGKRTTADP 170
RR REV EK S T G++ TA+P
Sbjct: 2079 RRFAREVSEKVSTGEWTMTLSGQKLTAEP 2107
>Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 256 RRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKE 146
+ NQ+ VKE+ RKT + + A+ ++ EKE
Sbjct: 361 KSNQKTVKERIRAEEARKTVEKEEEEAEEEAVEEEKE 397
>U64858-5|AAB18284.1| 409|Caenorhabditis elegans Hypothetical
protein C16D9.4 protein.
Length = 409
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 352 LCCMSRRCRYPPGVQIRVLHIHYDRN 429
LC + ++C PPG Q+ DRN
Sbjct: 348 LCALDQKCMNPPGAQVYCRFPDNDRN 373
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -1
Query: 259 ERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 122
+RR +RE E++ R+ + +R D + + E++ KN++K
Sbjct: 109 KRRAEREEDERQFAERRRQDDERRRKEEDERKAKADAEKIRKNEEK 154
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -1
Query: 259 ERRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKERVWKNQKK 122
+RR +RE E++ R+ + +R D + + E++ KN++K
Sbjct: 109 KRRAEREEDERQFAERRRQDDERRRKEEDERKAKADAEKIRKNEEK 154
>AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 256 RRNQREVKEKKSKANMRKTTKGKRTTADPPNIQREKE 146
+ NQ+ VKE+ RKT + + A+ ++ EKE
Sbjct: 361 KSNQKTVKERIRAEEARKTVEKEEEEAEEEAVEEEKE 397
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,825,243
Number of Sequences: 27780
Number of extensions: 118297
Number of successful extensions: 775
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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