Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0040.Seq
(347 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50471-1|AAA93474.1| 135|Anopheles gambiae protein ( Anopheles ... 42 7e-06
AJ973471-1|CAJ01518.1| 122|Anopheles gambiae hypothetical prote... 25 1.1
AJ697731-1|CAG26924.1| 122|Anopheles gambiae putative chemosens... 25 1.1
AJ697730-1|CAG26923.1| 122|Anopheles gambiae putative chemosens... 25 1.1
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 4.3
AJ973473-1|CAJ01520.1| 127|Anopheles gambiae hypothetical prote... 23 4.3
AF437891-1|AAL84186.1| 127|Anopheles gambiae sensory appendage ... 23 4.3
AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase... 22 5.7
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 22 5.7
AY146731-1|AAO12091.1| 150|Anopheles gambiae odorant-binding pr... 22 7.5
AJ973475-1|CAJ01522.1| 127|Anopheles gambiae hypothetical prote... 22 7.5
AJ697728-1|CAG26921.1| 127|Anopheles gambiae putative sensory a... 22 7.5
AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7... 22 7.5
AF437887-1|AAL84182.1| 150|Anopheles gambiae odorant binding pr... 22 7.5
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 22 7.5
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr... 21 9.9
AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8... 21 9.9
AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase p... 21 9.9
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge... 21 9.9
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 21 9.9
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 21 9.9
>U50471-1|AAA93474.1| 135|Anopheles gambiae protein ( Anopheles
gambiae putativeribosomal protein S8 mRNA, complete cds.
).
Length = 135
Score = 41.9 bits (94), Expect = 7e-06
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +2
Query: 257 LVRTKTLVKNAIXVVDATPFRQ 322
L+RTKTLVKNAI V+DA+PFRQ
Sbjct: 19 LIRTKTLVKNAIIVIDASPFRQ 40
Score = 40.7 bits (91), Expect = 2e-05
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = +3
Query: 210 RKTRIIDVVYNASNNNWCVQRPLSRMQLX**MQLHSGSWYESHYTL 347
RK RIIDVVYNASNN + L + + WYESHY L
Sbjct: 3 RKARIIDVVYNASNNELIRTKTLVKNAIIVIDASPFRQWYESHYLL 48
>AJ973471-1|CAJ01518.1| 122|Anopheles gambiae hypothetical protein
protein.
Length = 122
Score = 24.6 bits (51), Expect = 1.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 298 YXNCILDKGLCTHQ 257
Y C+LDKG CT +
Sbjct: 44 YLKCLLDKGPCTQE 57
>AJ697731-1|CAG26924.1| 122|Anopheles gambiae putative chemosensory
protein CSP2 protein.
Length = 122
Score = 24.6 bits (51), Expect = 1.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 298 YXNCILDKGLCTHQ 257
Y C+LDKG CT +
Sbjct: 44 YLKCLLDKGPCTQE 57
>AJ697730-1|CAG26923.1| 122|Anopheles gambiae putative chemosensory
protein CSP1 protein.
Length = 122
Score = 24.6 bits (51), Expect = 1.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 298 YXNCILDKGLCTHQ 257
Y C+LDKG CT +
Sbjct: 44 YLKCLLDKGPCTQE 57
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 88 LQTPGSVLSVSTPFVHVVEILSTV 159
+ TP +++STPF+ +LS +
Sbjct: 527 VNTPAGAINMSTPFIDSEIVLSAL 550
>AJ973473-1|CAJ01520.1| 127|Anopheles gambiae hypothetical protein
protein.
Length = 127
Score = 22.6 bits (46), Expect = 4.3
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 298 YXNCILDKGLCT 263
Y C+LD+G CT
Sbjct: 43 YYKCLLDQGRCT 54
>AF437891-1|AAL84186.1| 127|Anopheles gambiae sensory appendage
protein protein.
Length = 127
Score = 22.6 bits (46), Expect = 4.3
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -2
Query: 298 YXNCILDKGLCT 263
Y C+LD+G CT
Sbjct: 43 YYKCLLDQGRCT 54
>AY280612-1|AAQ21365.1| 309|Anopheles gambiae carbonic anhydrase
protein.
Length = 309
Score = 22.2 bits (45), Expect = 5.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 114 RIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTR 221
R ++ +GG R + LD +F WGSE + TR
Sbjct: 94 RDSAITMQGGGLGGRFV-LDQMHFHWGSEHTLDDTR 128
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 65 PLLAYGRTFPTGGPSL 18
P+ YG PTGG +L
Sbjct: 375 PVNGYGNNHPTGGSNL 390
>AY146731-1|AAO12091.1| 150|Anopheles gambiae odorant-binding
protein AgamOBP4 protein.
Length = 150
Score = 21.8 bits (44), Expect = 7.5
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +1
Query: 262 AYKDPCQECNXCSRC 306
+YKDPC + ++C
Sbjct: 124 SYKDPCDKAYFSAKC 138
>AJ973475-1|CAJ01522.1| 127|Anopheles gambiae hypothetical protein
protein.
Length = 127
Score = 21.8 bits (44), Expect = 7.5
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 298 YXNCILDKGLCT 263
Y C++D+G CT
Sbjct: 43 YFKCLMDEGRCT 54
>AJ697728-1|CAG26921.1| 127|Anopheles gambiae putative sensory
appendage protein SAP-2 protein.
Length = 127
Score = 21.8 bits (44), Expect = 7.5
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 298 YXNCILDKGLCT 263
Y C++D+G CT
Sbjct: 43 YFKCLMDEGRCT 54
>AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7
protein.
Length = 696
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 9 HWHKRRATGGKRAPIRKKRKYEL 77
HWH G +RK R+ EL
Sbjct: 224 HWHLVYPAEGPERVVRKDRRGEL 246
>AF437887-1|AAL84182.1| 150|Anopheles gambiae odorant binding
protein protein.
Length = 150
Score = 21.8 bits (44), Expect = 7.5
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +1
Query: 262 AYKDPCQECNXCSRC 306
+YKDPC + ++C
Sbjct: 124 SYKDPCDKAYFSAKC 138
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 211 RVEHSDPQEKLPVSRRSARYLVFP 140
+V+ S+P E+ PV +S +FP
Sbjct: 355 KVKSSEPVEQCPVKLKSIIETLFP 378
>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
protein.
Length = 1253
Score = 21.4 bits (43), Expect = 9.9
Identities = 10/42 (23%), Positives = 19/42 (45%)
Frame = +3
Query: 27 ATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTK 152
+T G +PI+ + L P P ++ V + G+T+
Sbjct: 841 STSGAASPIQTVKNDSLEEPEKQINYLPDWLYDVDLKNGDTE 882
>AJ459961-1|CAD31060.1| 700|Anopheles gambiae prophenoloxidase 8
protein.
Length = 700
Score = 21.4 bits (43), Expect = 9.9
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 9 HWHKRRATGGKRAPIRKKRKYEL 77
HWH G +RK R+ EL
Sbjct: 225 HWHLVYPASGPPDVVRKDRRGEL 247
>AJ010193-1|CAA09032.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 21.4 bits (43), Expect = 9.9
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 9 HWHKRRATGGKRAPIRKKRKYEL 77
HWH G +RK R+ EL
Sbjct: 211 HWHLVYPARGPNRIVRKDRRGEL 233
>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
dehydrogenase protein.
Length = 1325
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 66 SSSCVWAHVSHRWP 25
SS C W +SH+ P
Sbjct: 884 SSGCPWMGLSHKLP 897
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 21.4 bits (43), Expect = 9.9
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Frame = -3
Query: 198 PIPKRSYRCPDAAHGT*YFHHVNERSGYAEDRAWCLQRDA-----LTHTSSSCVW--AHV 40
P+ SY AH T HH + YA A A + H++SS V +H+
Sbjct: 168 PVHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAHHAAPIAHHAAPIAHSTSSIVHGPSHL 227
Query: 39 SH 34
SH
Sbjct: 228 SH 229
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 21.4 bits (43), Expect = 9.9
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Frame = -3
Query: 198 PIPKRSYRCPDAAHGT*YFHHVNERSGYAEDRAWCLQRDA-----LTHTSSSCVW--AHV 40
P+ SY AH T HH + YA A A + H++SS V +H+
Sbjct: 168 PVHVSSYAHAPVAHATVQHHHAAPIAHYAAPIAHHAAPIAHHAAPIAHSTSSIVHGPSHL 227
Query: 39 SH 34
SH
Sbjct: 228 SH 229
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,173
Number of Sequences: 2352
Number of extensions: 9779
Number of successful extensions: 35
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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