Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0040.Seq
(347 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 170 1e-42
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 170 1e-42
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 170 1e-42
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 170 1e-42
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 109 2e-24
AJ250854-1|CAC03757.1| 215|Homo sapiens cAMP-specific phosphodi... 30 0.40
BT007398-1|AAP36062.1| 219|Homo sapiens phosphodiesterase 4D, c... 29 0.68
BC008390-1|AAH08390.1| 219|Homo sapiens PDE4D protein protein. 29 0.68
AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptas... 29 3.0
AE006464-22|AAK61254.1| 1053|Homo sapiens Similar to pre-pro-meg... 29 4.0
L20969-1|AAC00042.1| 809|Homo sapiens cyclic AMP phosphodiester... 26 6.6
AY245866-1|AAP75760.1| 748|Homo sapiens cAMP-specific phosphodi... 26 6.6
AF536976-1|AAN10118.1| 748|Homo sapiens cAMP-specific phosphodi... 26 6.6
AF012073-1|AAC00069.1| 745|Homo sapiens cAMP-specific phosphodi... 26 6.6
AF536977-1|AAN10119.1| 687|Homo sapiens cAMP-specific phosphodi... 26 6.7
AY388960-1|AAQ90404.1| 679|Homo sapiens cAMP-specific phosphodi... 26 6.7
AY245867-1|AAP75761.1| 679|Homo sapiens cAMP-specific phosphodi... 26 6.7
L20970-1|AAA03592.1| 673|Homo sapiens phosphodiesterase protein. 26 6.7
AJ250855-1|CAC03758.1| 150|Homo sapiens cAMP-specific phosphodi... 26 7.6
U38254-1|AAC50283.1| 638|Homo sapiens amiloride sensitive sodiu... 28 9.3
DQ898176-1|ABI64069.1| 704|Homo sapiens sodium channel nonvolta... 28 9.3
DQ898175-1|ABI64068.1| 638|Homo sapiens sodium channel nonvolta... 28 9.3
BC125075-1|AAI25076.1| 378|Homo sapiens SCNN1D protein protein. 28 9.3
BC125074-1|AAI25075.1| 638|Homo sapiens sodium channel, nonvolt... 28 9.3
BC071784-1|AAH71784.1| 304|Homo sapiens SCNN1D protein protein. 28 9.3
BC036752-1|AAH36752.1| 560|Homo sapiens Similar to sodium chann... 28 9.3
AL162741-20|CAI23262.1| 638|Homo sapiens sodium channel, nonvol... 28 9.3
AL162741-19|CAI23261.1| 704|Homo sapiens sodium channel, nonvol... 28 9.3
AK131558-1|BAD18692.1| 669|Homo sapiens protein ( Homo sapiens ... 28 9.3
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 170 bits (413), Expect = 1e-42
Identities = 79/115 (68%), Positives = 87/115 (75%)
Frame = +3
Query: 3 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 182
RD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GN
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGN 64
Query: 183 FSWGSECSTRKTRIIDVVYNASNNNWCVQRPLSRMQLX**MQLHSGSWYESHYTL 347
FSWGSEC TRKTRIIDVVYNASNN + L + + WYESHY L
Sbjct: 65 FSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 119
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 170 bits (413), Expect = 1e-42
Identities = 79/115 (68%), Positives = 87/115 (75%)
Frame = +3
Query: 3 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 182
RD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GN
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGN 64
Query: 183 FSWGSECSTRKTRIIDVVYNASNNNWCVQRPLSRMQLX**MQLHSGSWYESHYTL 347
FSWGSEC TRKTRIIDVVYNASNN + L + + WYESHY L
Sbjct: 65 FSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 119
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 170 bits (413), Expect = 1e-42
Identities = 79/115 (68%), Positives = 87/115 (75%)
Frame = +3
Query: 3 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 182
RD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GN
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGN 64
Query: 183 FSWGSECSTRKTRIIDVVYNASNNNWCVQRPLSRMQLX**MQLHSGSWYESHYTL 347
FSWGSEC TRKTRIIDVVYNASNN + L + + WYESHY L
Sbjct: 65 FSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 119
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 170 bits (413), Expect = 1e-42
Identities = 79/115 (68%), Positives = 87/115 (75%)
Frame = +3
Query: 3 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 182
RD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GN
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGN 64
Query: 183 FSWGSECSTRKTRIIDVVYNASNNNWCVQRPLSRMQLX**MQLHSGSWYESHYTL 347
FSWGSEC TRKTRIIDVVYNASNN + L + + WYESHY L
Sbjct: 65 FSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 119
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 109 bits (263), Expect = 2e-24
Identities = 62/115 (53%), Positives = 70/115 (60%)
Frame = +3
Query: 3 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 182
RD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGG
Sbjct: 5 RDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG------------- 51
Query: 183 FSWGSECSTRKTRIIDVVYNASNNNWCVQRPLSRMQLX**MQLHSGSWYESHYTL 347
C TRKTRIIDVVYNASNN + L + + WYESHY L
Sbjct: 52 ------C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 99
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +2
Query: 257 LVRTKTLVKNAIXVVDATPFRQ 322
LVRTKTLVKN I ++D+TP+RQ
Sbjct: 70 LVRTKTLVKNCIVLIDSTPYRQ 91
>AJ250854-1|CAC03757.1| 215|Homo sapiens cAMP-specific
phosphodiesterase 4D protein.
Length = 215
Score = 30.3 bits (65), Expect(2) = 0.40
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 115 VSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTIIGAY 267
+ TPF V+ L TVR + +T+L DR P+ I TI G Y
Sbjct: 158 IVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATITGLY 208
Score = 21.0 bits (42), Expect(2) = 0.40
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 85 PLQTPGSVLSVSTPFVH 135
P+ +PGS L + FVH
Sbjct: 104 PMTSPGSGLILQANFVH 120
>BT007398-1|AAP36062.1| 219|Homo sapiens phosphodiesterase 4D,
cAMP-specific (phosphodiesterase E3 dunce homolog,
Drosop protein.
Length = 219
Score = 29.5 bits (63), Expect(2) = 0.68
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 115 VSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTIIGAYKD 273
+ TPF V+ L TVR + +T+L DR P+ I TI G++ +
Sbjct: 158 IVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATITGSWME 210
Score = 21.0 bits (42), Expect(2) = 0.68
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 85 PLQTPGSVLSVSTPFVH 135
P+ +PGS L + FVH
Sbjct: 104 PMTSPGSGLILQANFVH 120
>BC008390-1|AAH08390.1| 219|Homo sapiens PDE4D protein protein.
Length = 219
Score = 29.5 bits (63), Expect(2) = 0.68
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 115 VSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTIIGAYKD 273
+ TPF V+ L TVR + +T+L DR P+ I TI G++ +
Sbjct: 158 IVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATITGSWME 210
Score = 21.0 bits (42), Expect(2) = 0.68
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 85 PLQTPGSVLSVSTPFVH 135
P+ +PGS L + FVH
Sbjct: 104 PMTSPGSGLILQANFVH 120
>AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptase
protein.
Length = 523
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 220 RVLRVEHSDPQEKLPVSRRSARYLVFPPRERTE 122
R R E PQ+ + V RS R L PPR RT+
Sbjct: 411 RTARCELRSPQQPVSVPGRSPRALWRPPRRRTQ 443
>AE006464-22|AAK61254.1| 1053|Homo sapiens Similar to
pre-pro-megakarycyte potentiating factor precursor
protein.
Length = 1053
Score = 29.1 bits (62), Expect = 4.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 63 SSCVWAHVSHRWPFAYAS 10
+SC WA HRWP + S
Sbjct: 221 TSCAWAQAVHRWPVLWGS 238
>L20969-1|AAC00042.1| 809|Homo sapiens cyclic AMP phosphodiesterase
protein.
Length = 809
Score = 25.8 bits (54), Expect(2) = 6.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 115 VSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTI 255
+ TPF V+ L TVR + +T+L DR P+ I TI
Sbjct: 222 IVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATI 268
Score = 21.0 bits (42), Expect(2) = 6.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 85 PLQTPGSVLSVSTPFVH 135
P+ +PGS L + FVH
Sbjct: 168 PMTSPGSGLILQANFVH 184
>AY245866-1|AAP75760.1| 748|Homo sapiens cAMP-specific
phosphodiesterase variant PDE4D7 protein.
Length = 748
Score = 25.8 bits (54), Expect(2) = 6.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 115 VSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTI 255
+ TPF V+ L TVR + +T+L DR P+ I TI
Sbjct: 161 IVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATI 207
Score = 21.0 bits (42), Expect(2) = 6.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 85 PLQTPGSVLSVSTPFVH 135
P+ +PGS L + FVH
Sbjct: 107 PMTSPGSGLILQANFVH 123
>AF536976-1|AAN10118.1| 748|Homo sapiens cAMP-specific
phosphodiesterase PDE4D7 protein.
Length = 748
Score = 25.8 bits (54), Expect(2) = 6.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 115 VSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTI 255
+ TPF V+ L TVR + +T+L DR P+ I TI
Sbjct: 161 IVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATI 207
Score = 21.0 bits (42), Expect(2) = 6.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 85 PLQTPGSVLSVSTPFVH 135
P+ +PGS L + FVH
Sbjct: 107 PMTSPGSGLILQANFVH 123
>AF012073-1|AAC00069.1| 745|Homo sapiens cAMP-specific
phosphodiesterase PDE4D5 protein.
Length = 745
Score = 25.8 bits (54), Expect(2) = 6.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 115 VSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTI 255
+ TPF V+ L TVR + +T+L DR P+ I TI
Sbjct: 158 IVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATI 204
Score = 21.0 bits (42), Expect(2) = 6.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 85 PLQTPGSVLSVSTPFVH 135
P+ +PGS L + FVH
Sbjct: 104 PMTSPGSGLILQANFVH 120
>AF536977-1|AAN10119.1| 687|Homo sapiens cAMP-specific
phosphodiesterase PDE4D8 protein.
Length = 687
Score = 25.8 bits (54), Expect(2) = 6.7
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 115 VSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTI 255
+ TPF V+ L TVR + +T+L DR P+ I TI
Sbjct: 100 IVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATI 146
Score = 21.0 bits (42), Expect(2) = 6.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 85 PLQTPGSVLSVSTPFVH 135
P+ +PGS L + FVH
Sbjct: 46 PMTSPGSGLILQANFVH 62
>AY388960-1|AAQ90404.1| 679|Homo sapiens cAMP-specific
phosphodiesterase PDE4D9 protein.
Length = 679
Score = 25.8 bits (54), Expect(2) = 6.7
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 115 VSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTI 255
+ TPF V+ L TVR + +T+L DR P+ I TI
Sbjct: 92 IVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATI 138
Score = 21.0 bits (42), Expect(2) = 6.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 85 PLQTPGSVLSVSTPFVH 135
P+ +PGS L + FVH
Sbjct: 38 PMTSPGSGLILQANFVH 54
>AY245867-1|AAP75761.1| 679|Homo sapiens cAMP-specific
phosphodiesterase variant PDE4D9 protein.
Length = 679
Score = 25.8 bits (54), Expect(2) = 6.7
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 115 VSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTI 255
+ TPF V+ L TVR + +T+L DR P+ I TI
Sbjct: 92 IVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATI 138
Score = 21.0 bits (42), Expect(2) = 6.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 85 PLQTPGSVLSVSTPFVH 135
P+ +PGS L + FVH
Sbjct: 38 PMTSPGSGLILQANFVH 54
>L20970-1|AAA03592.1| 673|Homo sapiens phosphodiesterase protein.
Length = 673
Score = 25.8 bits (54), Expect(2) = 6.7
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 115 VSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTI 255
+ TPF V+ L TVR + +T+L DR P+ I TI
Sbjct: 86 IVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATI 132
Score = 21.0 bits (42), Expect(2) = 6.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 85 PLQTPGSVLSVSTPFVH 135
P+ +PGS L + FVH
Sbjct: 32 PMTSPGSGLILQANFVH 48
>AJ250855-1|CAC03758.1| 150|Homo sapiens cAMP-specific
phosphodiesterase 4D protein.
Length = 150
Score = 25.8 bits (54), Expect(2) = 7.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 115 VSTPFVHVVEILSTVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTI 255
+ TPF V+ L TVR + +T+L DR P+ I TI
Sbjct: 102 IVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMCNQPSINKATI 148
Score = 21.0 bits (42), Expect(2) = 7.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 85 PLQTPGSVLSVSTPFVH 135
P+ +PGS L + FVH
Sbjct: 48 PMTSPGSGLILQANFVH 64
>U38254-1|AAC50283.1| 638|Homo sapiens amiloride sensitive sodium
channel delta subunit protein.
Length = 638
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 144 FHHVNERSGYAEDRAWCLQRDALTH 70
FHH S Y D W QR +TH
Sbjct: 278 FHHPTYGSCYTVDGVWTAQRPGITH 302
>DQ898176-1|ABI64069.1| 704|Homo sapiens sodium channel
nonvoltage-gated 1 delta protein.
Length = 704
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 144 FHHVNERSGYAEDRAWCLQRDALTH 70
FHH S Y D W QR +TH
Sbjct: 344 FHHPTYGSCYTVDGVWTAQRPGITH 368
>DQ898175-1|ABI64068.1| 638|Homo sapiens sodium channel
nonvoltage-gated 1 delta protein.
Length = 638
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 144 FHHVNERSGYAEDRAWCLQRDALTH 70
FHH S Y D W QR +TH
Sbjct: 278 FHHPTYGSCYTVDGVWTAQRPGITH 302
>BC125075-1|AAI25076.1| 378|Homo sapiens SCNN1D protein protein.
Length = 378
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 144 FHHVNERSGYAEDRAWCLQRDALTH 70
FHH S Y D W QR +TH
Sbjct: 278 FHHPTYGSCYTVDGVWTAQRPGITH 302
>BC125074-1|AAI25075.1| 638|Homo sapiens sodium channel,
nonvoltage-gated 1, delta protein.
Length = 638
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 144 FHHVNERSGYAEDRAWCLQRDALTH 70
FHH S Y D W QR +TH
Sbjct: 278 FHHPTYGSCYTVDGVWTAQRPGITH 302
>BC071784-1|AAH71784.1| 304|Homo sapiens SCNN1D protein protein.
Length = 304
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 144 FHHVNERSGYAEDRAWCLQRDALTH 70
FHH S Y D W QR +TH
Sbjct: 170 FHHPTYGSCYTVDGVWTAQRPGITH 194
>BC036752-1|AAH36752.1| 560|Homo sapiens Similar to sodium channel,
nonvoltage-gated 1, delta protein.
Length = 560
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 144 FHHVNERSGYAEDRAWCLQRDALTH 70
FHH S Y D W QR +TH
Sbjct: 278 FHHPTYGSCYTVDGVWTAQRPGITH 302
>AL162741-20|CAI23262.1| 638|Homo sapiens sodium channel,
nonvoltage-gated 1, delta protein.
Length = 638
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 144 FHHVNERSGYAEDRAWCLQRDALTH 70
FHH S Y D W QR +TH
Sbjct: 278 FHHPTYGSCYTVDGVWTAQRPGITH 302
>AL162741-19|CAI23261.1| 704|Homo sapiens sodium channel,
nonvoltage-gated 1, delta protein.
Length = 704
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 144 FHHVNERSGYAEDRAWCLQRDALTH 70
FHH S Y D W QR +TH
Sbjct: 344 FHHPTYGSCYTVDGVWTAQRPGITH 368
>AK131558-1|BAD18692.1| 669|Homo sapiens protein ( Homo sapiens
cDNA FLJ16802 fis, clone TESTI4005158, highly similar
to Amiloride-sensitive sodium channel delta-subunit. ).
Length = 669
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 144 FHHVNERSGYAEDRAWCLQRDALTH 70
FHH S Y D W QR +TH
Sbjct: 309 FHHPTYGSCYTVDGVWTAQRPGITH 333
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,539,903
Number of Sequences: 237096
Number of extensions: 1333282
Number of successful extensions: 2557
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2548
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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