Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0040.Seq
(347 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118446-1|AAM48475.1| 208|Drosophila melanogaster SD17528p pro... 147 4e-36
AY118424-1|AAM48453.1| 208|Drosophila melanogaster RH06886p pro... 147 4e-36
AE014297-4463|AAN14192.1| 208|Drosophila melanogaster CG7808-PC... 147 4e-36
D17389-4|BAA04212.1| 5112|Drosophila melanogaster ryanodine rece... 28 3.7
D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine rece... 28 3.7
D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine rece... 28 3.7
D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine rece... 28 3.7
AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD... 28 3.7
AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC... 28 3.7
AE013599-721|AAM71082.1| 5113|Drosophila melanogaster CG10844-PB... 28 3.7
AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA... 28 3.7
AY069780-1|AAL39925.1| 741|Drosophila melanogaster SD02338p pro... 27 8.6
AY069301-1|AAL39446.1| 518|Drosophila melanogaster HL03404p pro... 27 8.6
AE014296-515|AAF47691.2| 2252|Drosophila melanogaster CG2083-PA ... 27 8.6
>AY118446-1|AAM48475.1| 208|Drosophila melanogaster SD17528p
protein.
Length = 208
Score = 147 bits (356), Expect = 4e-36
Identities = 71/115 (61%), Positives = 82/115 (71%)
Frame = +3
Query: 3 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 182
RD HKRRATGGKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+TGN
Sbjct: 5 RDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGN 64
Query: 183 FSWGSECSTRKTRIIDVVYNASNNNWCVQRPLSRMQLX**MQLHSGSWYESHYTL 347
F+W SE RKTRI DVVYNASNN + L + + WYE+HY L
Sbjct: 65 FAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVL 119
>AY118424-1|AAM48453.1| 208|Drosophila melanogaster RH06886p
protein.
Length = 208
Score = 147 bits (356), Expect = 4e-36
Identities = 71/115 (61%), Positives = 82/115 (71%)
Frame = +3
Query: 3 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 182
RD HKRRATGGKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+TGN
Sbjct: 5 RDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGN 64
Query: 183 FSWGSECSTRKTRIIDVVYNASNNNWCVQRPLSRMQLX**MQLHSGSWYESHYTL 347
F+W SE RKTRI DVVYNASNN + L + + WYE+HY L
Sbjct: 65 FAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVL 119
>AE014297-4463|AAN14192.1| 208|Drosophila melanogaster CG7808-PC
protein.
Length = 208
Score = 147 bits (356), Expect = 4e-36
Identities = 71/115 (61%), Positives = 82/115 (71%)
Frame = +3
Query: 3 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 182
RD HKRRATGGKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+TGN
Sbjct: 5 RDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGN 64
Query: 183 FSWGSECSTRKTRIIDVVYNASNNNWCVQRPLSRMQLX**MQLHSGSWYESHYTL 347
F+W SE RKTRI DVVYNASNN + L + + WYE+HY L
Sbjct: 65 FAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVL 119
>D17389-4|BAA04212.1| 5112|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5112
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 88 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4279 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4323
>D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5112
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 88 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4279 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4323
>D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5126
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 88 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4293 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4337
>D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5126
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 88 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4293 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4337
>AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD,
isoform D protein.
Length = 5113
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 88 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4280 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4324
>AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC,
isoform C protein.
Length = 5127
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 88 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4294 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4338
>AE013599-721|AAM71082.1| 5113|Drosophila melanogaster CG10844-PB,
isoform B protein.
Length = 5113
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 88 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4280 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4324
>AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA,
isoform A protein.
Length = 5127
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 88 LQTPGSVLSVSTPFVHVVEILSTVRCVWTPVTSLGDRNV-QLAKP 219
L+T GSVL+ PF+ +EIL + + + + D N+ Q KP
Sbjct: 4294 LETAGSVLNYFEPFLGRIEILGSSKRIERVYFEIKDSNIEQWEKP 4338
>AY069780-1|AAL39925.1| 741|Drosophila melanogaster SD02338p
protein.
Length = 741
Score = 26.6 bits (56), Expect = 8.6
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 PPVGNVRPYARRGSMS*GVPLQTPGSVLSVS-TPFVHVVEILSTVRCVWTPVTSLGDRNV 204
P GN P + G+ + P+ +PGS S P V EI + P +G +
Sbjct: 449 PGAGNQAPASGAGAATTAPPIASPGSTNSTKIEPIGEVAEINENIEAFQDP--QMGGVAI 506
Query: 205 QLAKPVSLMLCIMH 246
L L+ C H
Sbjct: 507 ALNHGSVLIECAKH 520
>AY069301-1|AAL39446.1| 518|Drosophila melanogaster HL03404p
protein.
Length = 518
Score = 26.6 bits (56), Expect = 8.6
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 PPVGNVRPYARRGSMS*GVPLQTPGSVLSVS-TPFVHVVEILSTVRCVWTPVTSLGDRNV 204
P GN P + G+ + P+ +PGS S P V EI + P +G +
Sbjct: 226 PGAGNQAPASGAGAATTAPPIASPGSTNSTKIEPIGEVAEINENIEAFQDP--QMGGVAI 283
Query: 205 QLAKPVSLMLCIMH 246
L L+ C H
Sbjct: 284 ALNHGSVLIECAKH 297
>AE014296-515|AAF47691.2| 2252|Drosophila melanogaster CG2083-PA
protein.
Length = 2252
Score = 26.6 bits (56), Expect = 8.6
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 PPVGNVRPYARRGSMS*GVPLQTPGSVLSVS-TPFVHVVEILSTVRCVWTPVTSLGDRNV 204
P GN P + G+ + P+ +PGS S P V EI + P +G +
Sbjct: 1960 PGAGNQAPASGAGAATTAPPIASPGSTNSTKIEPIGEVAEINENIEAFQDP--QMGGVAI 2017
Query: 205 QLAKPVSLMLCIMH 246
L L+ C H
Sbjct: 2018 ALNHGSVLIECAKH 2031
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,303,061
Number of Sequences: 53049
Number of extensions: 400515
Number of successful extensions: 1030
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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