Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0040.Seq
(347 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 182 8e-49
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 25 0.34
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 25 0.34
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 0.78
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 0.78
DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein ... 23 1.0
AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein ... 23 1.0
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 22 2.4
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 22 2.4
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 22 2.4
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 20 7.3
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 20 7.3
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 20 7.3
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 20 7.3
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 20 7.3
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 20 9.6
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 20 9.6
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 182 bits (444), Expect = 8e-49
Identities = 84/115 (73%), Positives = 92/115 (80%)
Frame = +3
Query: 3 RDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGN 182
RDHWHKRRATGGKR PIRKKRK+ELGRPAANT+LGPQRIH+VR+RGGN KYRALRLDTGN
Sbjct: 5 RDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRLDTGN 64
Query: 183 FSWGSECSTRKTRIIDVVYNASNNNWCVQRPLSRMQLX**MQLHSGSWYESHYTL 347
FSWGSEC+TRKTRIIDVVYNASNN + L + + WYE HY L
Sbjct: 65 FSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVL 119
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 24.6 bits (51), Expect = 0.34
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 298 YXNCILDKGLCT 263
Y NC+LD+G CT
Sbjct: 46 YVNCLLDQGPCT 57
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 24.6 bits (51), Expect = 0.34
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 298 YXNCILDKGLCT 263
Y NC+LD+G CT
Sbjct: 46 YVNCLLDQGPCT 57
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.4 bits (48), Expect = 0.78
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 331 SYQLPEWSCIYYXNCILDKGLCTHQLLLDALYTTS 227
+Y+ P WS + C L LC ++ +TTS
Sbjct: 521 TYEYPWWSHVLGWLCGLSSMLCIPGYMIYIWFTTS 555
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.4 bits (48), Expect = 0.78
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 331 SYQLPEWSCIYYXNCILDKGLCTHQLLLDALYTTS 227
+Y+ P WS + C L LC ++ +TTS
Sbjct: 574 TYEYPWWSHVLGWLCGLSSMLCIPGYMIYIWFTTS 608
>DQ855487-1|ABH88174.1| 125|Apis mellifera chemosensory protein 6
protein.
Length = 125
Score = 23.0 bits (47), Expect = 1.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 298 YXNCILDKGLCTHQ 257
Y C+LD+G CT++
Sbjct: 43 YIKCMLDEGPCTNE 56
>AJ973402-1|CAJ01449.1| 125|Apis mellifera hypothetical protein
protein.
Length = 125
Score = 23.0 bits (47), Expect = 1.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 298 YXNCILDKGLCTHQ 257
Y C+LD+G CT++
Sbjct: 43 YIKCMLDEGPCTNE 56
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.8 bits (44), Expect = 2.4
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 298 YXNCILDKGLCT 263
Y C++D+G CT
Sbjct: 47 YFKCLMDEGRCT 58
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.8 bits (44), Expect = 2.4
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 298 YXNCILDKGLCT 263
Y C++D+G CT
Sbjct: 47 YFKCLMDEGRCT 58
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.8 bits (44), Expect = 2.4
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 298 YXNCILDKGLCT 263
Y C++D+G CT
Sbjct: 47 YFKCLMDEGRCT 58
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 20.2 bits (40), Expect = 7.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 120 GYAEDRAWCLQRDALTHT 67
G A R W LQ THT
Sbjct: 49 GKAFSRPWLLQGHIRTHT 66
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 20.2 bits (40), Expect = 7.3
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = +3
Query: 12 WHKRRATGGKRAP 50
WH + GKR P
Sbjct: 148 WHPGKIVNGKRVP 160
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 20.2 bits (40), Expect = 7.3
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 175 VSRRSARYLVFPPRE 131
+ RR++RY + PP+E
Sbjct: 116 IIRRNSRYPLRPPQE 130
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 20.2 bits (40), Expect = 7.3
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 168 LDTGNFSWGSEC 203
++ G SWG+EC
Sbjct: 364 VNIGIISWGAEC 375
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 20.2 bits (40), Expect = 7.3
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = +3
Query: 12 WHKRRATGGKRAP 50
WH + GKR P
Sbjct: 148 WHPGKIVNGKRVP 160
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 19.8 bits (39), Expect = 9.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 76 NSYFLFLRMGARFPPVALRL 17
+SY +F MG+ F P+ + L
Sbjct: 196 SSYVIFSAMGSFFLPMLVML 215
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 19.8 bits (39), Expect = 9.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 167 TQRTVLSISTT*TNGVDTLRTEPGVCSG 84
T ++ SI NG+ + T+PG+ +G
Sbjct: 108 TIHSIHSIDGDEENGLTSESTDPGLVAG 135
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,728
Number of Sequences: 438
Number of extensions: 2394
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 7936320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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