Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0028.Seq
(329 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g26480.1 68414.m03229 14-3-3 protein GF14 iota (GRF12) identi... 44 2e-05
At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10) ide... 40 3e-04
At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10) ide... 40 3e-04
At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10) ide... 40 3e-04
At3g02520.1 68416.m00240 14-3-3 protein GF14 nu (GRF7) identical... 40 5e-04
At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identi... 40 5e-04
At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identica... 38 0.002
At5g38480.1 68418.m04651 14-3-3 protein GF14 psi (GRF3) (RCI1) i... 37 0.003
At1g34760.1 68414.m04323 14-3-3 protein GF14 omicron (GRF11) ide... 37 0.003
At5g16050.1 68418.m01876 14-3-3 protein GF14 upsilon (GRF5) iden... 37 0.004
At2g42590.1 68415.m05270 14-3-3 protein GF14 mu (GRF9) identical... 36 0.005
At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi / general... 35 0.011
At5g10450.1 68418.m01211 14-3-3 protein GF14 lambda (GRF6) (AFT1... 33 0.035
At1g78220.1 68414.m09115 14-3-3 protein GF14 pi (GRF13) similar ... 33 0.035
At5g65430.2 68418.m08229 14-3-3 protein GF14 kappa (GRF8) identi... 33 0.046
At5g65430.1 68418.m08228 14-3-3 protein GF14 kappa (GRF8) identi... 33 0.046
At1g60640.1 68414.m06826 expressed protein 29 1.00
At5g04980.1 68418.m00527 endonuclease/exonuclease/phosphatase fa... 28 1.7
At1g22290.1 68414.m02787 14-3-3 protein GF14, putative (GRF10) s... 28 1.7
At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transfera... 27 2.3
At1g18180.1 68414.m02260 expressed protein 27 3.0
At2g15290.1 68415.m01744 expressed protein 27 4.0
At4g16960.1 68417.m02558 disease resistance protein (TIR-NBS-LRR... 26 7.0
At4g16940.1 68417.m02555 disease resistance protein (TIR-NBS-LRR... 26 7.0
At3g26140.1 68416.m03261 glycosyl hydrolase family 5 protein / c... 25 9.3
>At1g26480.1 68414.m03229 14-3-3 protein GF14 iota (GRF12) identical
to 14-3-3 protein GF14iota GI:12963453 from [Arabidopsis
thaliana]
Length = 268
Score = 44.4 bits (100), Expect = 2e-05
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = +1
Query: 136 LPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGSNLATRRGTXFQLLIRMSVC 315
+ SS ++E V AKL+EQAERYD+M MK+V S L + + +
Sbjct: 1 MSSSGSDKERETFVYMAKLSEQAERYDEMVETMKKVARVNSELTVEERNLLSVGYKNVIG 60
Query: 316 ARRS 327
ARR+
Sbjct: 61 ARRA 64
>At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 251
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +1
Query: 151 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGSNLATRRGTXFQLLIRMSVCARRS 327
M ++E+ V AKL+EQ ERYD+M AMK+V + L + + + ARR+
Sbjct: 1 MENEREKQVYLAKLSEQTERYDEMVEAMKKVAQLDVELTVEERNLVSVGYKNVIGARRA 59
>At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +1
Query: 151 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGSNLATRRGTXFQLLIRMSVCARRS 327
M ++E+ V AKL+EQ ERYD+M AMK+V + L + + + ARR+
Sbjct: 1 MENEREKQVYLAKLSEQTERYDEMVEAMKKVAQLDVELTVEERNLVSVGYKNVIGARRA 59
>At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +1
Query: 151 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGSNLATRRGTXFQLLIRMSVCARRS 327
M ++E+ V AKL+EQ ERYD+M AMK+V + L + + + ARR+
Sbjct: 1 MENEREKQVYLAKLSEQTERYDEMVEAMKKVAQLDVELTVEERNLVSVGYKNVIGARRA 59
>At3g02520.1 68416.m00240 14-3-3 protein GF14 nu (GRF7) identical to
14-3-3 protein GF14 nu GI:1531631 from [Arabidopsis
thaliana]
Length = 265
Score = 39.5 bits (88), Expect = 5e-04
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1
Query: 151 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET 252
MS +EE V AKLAEQAERY++M M++V +T
Sbjct: 1 MSSSREENVYLAKLAEQAERYEEMVEFMEKVAKT 34
Score = 30.3 bits (65), Expect = 0.33
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 261 LSNEERNLLSVAYKNV 308
L+ EERNLLSVAYKNV
Sbjct: 40 LTVEERNLLSVAYKNV 55
>At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identical
to GF14omega isoform GI:487791 from [Arabidopsis
thaliana]
Length = 259
Score = 39.5 bits (88), Expect = 5e-04
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 151 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GSNLATRRGTXFQLLIRMSVCARR 324
M+ +EE V AKLAEQAERY++M M++V+ G L + + + ARR
Sbjct: 1 MASGREEFVYMAKLAEQAERYEEMVEFMEKVSAAVDGDELTVEERNLLSVAYKNVIGARR 60
Query: 325 S 327
+
Sbjct: 61 A 61
>At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identical
to GF14 protein phi chain GI:1493805, SP:P46077 from
[Arabidopsis thaliana]
Length = 267
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 163 KEELVQRAKLAEQAERYDDMAAAMKEVTE 249
+EE V AKLAEQAERY++M M++V E
Sbjct: 11 REEFVYLAKLAEQAERYEEMVEFMEKVAE 39
Score = 30.3 bits (65), Expect = 0.33
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 261 LSNEERNLLSVAYKNV 308
L+ EERNLLSVAYKNV
Sbjct: 46 LTVEERNLLSVAYKNV 61
>At5g38480.1 68418.m04651 14-3-3 protein GF14 psi (GRF3) (RCI1)
identical to 14-3-3 protein GF14 psi GI:1168200,
SP:P42644
Length = 255
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 163 KEELVQRAKLAEQAERYDDMAAAMKEVTET 252
+EE V AKLAEQAERY++M M++V +T
Sbjct: 4 REENVYMAKLAEQAERYEEMVEFMEKVAKT 33
Score = 31.5 bits (68), Expect = 0.14
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 261 LSNEERNLLSVAYKNV 308
LS EERNLLSVAYKNV
Sbjct: 39 LSVEERNLLSVAYKNV 54
>At1g34760.1 68414.m04323 14-3-3 protein GF14 omicron (GRF11)
identical to SP:Q9S9Z8, 14-3-3-like protein GF14 omicron
(General regulatory factor 11){Arabidopsis thaliana}
Length = 255
Score = 37.1 bits (82), Expect = 0.003
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +1
Query: 151 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGSNLATRRGTXFQLLIRMSVCARRS 327
M ++ + V AKL EQAERYD+M AMK+V L + + + ARR+
Sbjct: 1 MENERAKQVYLAKLNEQAERYDEMVEAMKKVAALDVELTIEERNLLSVGYKNVIGARRA 59
>At5g16050.1 68418.m01876 14-3-3 protein GF14 upsilon (GRF5)
identical to 14-3-3 protein GF14 upsilon GI:2232148 from
[Arabidopsis thaliana]
Length = 268
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 163 KEELVQRAKLAEQAERYDDMAAAMKEVTET 252
+EE V AKLAEQAERY++M M++V +T
Sbjct: 7 REENVYLAKLAEQAERYEEMVEFMEKVAKT 36
Score = 30.3 bits (65), Expect = 0.33
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 261 LSNEERNLLSVAYKNV 308
L+ EERNLLSVAYKNV
Sbjct: 42 LTVEERNLLSVAYKNV 57
>At2g42590.1 68415.m05270 14-3-3 protein GF14 mu (GRF9) identical to
GF14 mu GI:3551052, SP:Q96299 from [Arabidopsis
thaliana]
Length = 263
Score = 36.3 bits (80), Expect = 0.005
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +1
Query: 160 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGSNLATRRGTXFQLLIRMSVCARRS 327
+++ V AKL+EQAERY++M +MK V + +L + + + +RR+
Sbjct: 6 ERDTFVYLAKLSEQAERYEEMVESMKSVAKLNVDLTVEERNLLSVGYKNVIGSRRA 61
>At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi / general
regulatory factor 1 (GRF1) identical to 14-3-3 protein
GF14 chi chain GI:1702986, SP:P42643 from [Arabidopsis
thaliana]
Length = 267
Score = 35.1 bits (77), Expect = 0.011
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 163 KEELVQRAKLAEQAERYDDMAAAMKEVTE 249
++E V AKLAEQAERY++M M++V +
Sbjct: 10 RDEFVYMAKLAEQAERYEEMVEFMEKVAK 38
Score = 30.3 bits (65), Expect = 0.33
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 261 LSNEERNLLSVAYKNV 308
L+ EERNLLSVAYKNV
Sbjct: 45 LTVEERNLLSVAYKNV 60
>At5g10450.1 68418.m01211 14-3-3 protein GF14 lambda (GRF6) (AFT1)
identical to 14-3-3 GF14lambda GI:1345595 from
[Arabidopsis thaliana]
Length = 248
Score = 33.5 bits (73), Expect = 0.035
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 154 SVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGSNLA 267
++ +++ V AKLAEQAERY++M M+++ TG+ A
Sbjct: 4 TLGRDQYVYMAKLAEQAERYEEMVQFMEQLV-TGATPA 40
Score = 30.3 bits (65), Expect = 0.33
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 261 LSNEERNLLSVAYKNV 308
L+ EERNLLSVAYKNV
Sbjct: 43 LTVEERNLLSVAYKNV 58
>At1g78220.1 68414.m09115 14-3-3 protein GF14 pi (GRF13) similar to
GF14 epsilon isoform GI:1022778 from [Arabidopsis
thaliana]; contains Pfam profile: PF00244 14-3-3
proteins
Length = 245
Score = 33.5 bits (73), Expect = 0.035
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1
Query: 151 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGSNLA 267
M ++E+L+ AKL QA RYDD+ +M++V E L+
Sbjct: 1 MENEREKLIYLAKLGCQAGRYDDVMKSMRKVCELDIELS 39
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 255 VXLSNEERNLLSVAYKNV 308
+ LS EER+LL+ YKNV
Sbjct: 36 IELSEEERDLLTTGYKNV 53
>At5g65430.2 68418.m08229 14-3-3 protein GF14 kappa (GRF8) identical
to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from
[Arabidopsis thaliana]
Length = 246
Score = 33.1 bits (72), Expect = 0.046
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +1
Query: 154 SVDKEELVQRAKLAEQAERYDDMAAAMKEV 243
++ +++ V AKLAEQAERY++M M+++
Sbjct: 4 TLSRDQYVYMAKLAEQAERYEEMVQFMEQL 33
Score = 30.3 bits (65), Expect = 0.33
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 261 LSNEERNLLSVAYKNV 308
L+ EERNLLSVAYKNV
Sbjct: 43 LTVEERNLLSVAYKNV 58
>At5g65430.1 68418.m08228 14-3-3 protein GF14 kappa (GRF8) identical
to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from
[Arabidopsis thaliana]
Length = 248
Score = 33.1 bits (72), Expect = 0.046
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +1
Query: 154 SVDKEELVQRAKLAEQAERYDDMAAAMKEV 243
++ +++ V AKLAEQAERY++M M+++
Sbjct: 4 TLSRDQYVYMAKLAEQAERYEEMVQFMEQL 33
Score = 30.3 bits (65), Expect = 0.33
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 261 LSNEERNLLSVAYKNV 308
L+ EERNLLSVAYKNV
Sbjct: 43 LTVEERNLLSVAYKNV 58
>At1g60640.1 68414.m06826 expressed protein
Length = 340
Score = 28.7 bits (61), Expect = 1.00
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 142 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGSNLATRRGTXFQ 291
SS E+LV+ K+ E DD+ A +E + G+ + R+G Q
Sbjct: 136 SSKKHARMEKLVKEGKIRTDDEEVDDLETASQEKEKKGNRRSQRQGKRSQ 185
>At5g04980.1 68418.m00527 endonuclease/exonuclease/phosphatase
family protein contains similarity to inositol
polyphosphate 5-phosphatase I (GI:10444261) and II
(GI:10444263) [Arabidopsis thaliana]; contains Pfam
profile PF03372: Endonuclease/Exonuclease/phosphatase
family
Length = 437
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -1
Query: 215 SYRSACSANLARCTSSSLSTDIVDD-GRELIH*CP 114
S+R+ C L C S+ S DIV GRE CP
Sbjct: 113 SFRTECRRKLKICNCSTFSEDIVRKYGRESCFRCP 147
>At1g22290.1 68414.m02787 14-3-3 protein GF14, putative (GRF10)
similar to 14-3-3 protein GF14 epsilon GI:5802798 from
[Arabidopsis thaliana]
Length = 196
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 252 RVXLSNEERNLLSVAYKNV 308
+ LS +ERNL+SV YKNV
Sbjct: 39 KAELSAKERNLVSVGYKNV 57
>At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transferase
family protein similar to UDP-glucose:salicylic acid
glucosyltransferase [Nicotiana tabacum] GI:7385017;
contains Pfam profiles PF00201: UDP-glucoronosyl and
UDP-glucosyl transferase, PF01535: PPR repeat
Length = 1184
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +2
Query: 50 AREXLILCLNLLVQIHFSPSDKGISELVLFHRPRCPS 160
A++ ++L + + V+I+ + S K +V+F+R CPS
Sbjct: 420 AQKRIVLFVKMTVRIYDAVSTKIPKSIVVFNRTPCPS 456
>At1g18180.1 68414.m02260 expressed protein
Length = 292
Score = 27.1 bits (57), Expect = 3.0
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Frame = +2
Query: 149 RCPSTRKNWCNVPNW-----PNKLSDMTTW 223
+CP + WC+V W PN +M W
Sbjct: 164 KCPENKGKWCDVGVWKYSRHPNYFGEMLLW 193
>At2g15290.1 68415.m01744 expressed protein
Length = 296
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 133 SLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETG 255
S P+S SV + V +AKLA+ A+R + + K + G
Sbjct: 84 SYPTSPSSVPGDNEVDKAKLAQVAKRLEKTSRYFKRLGSIG 124
>At4g16960.1 68417.m02558 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1041
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 71 CLNLLVQIHFSPSDKGISELVL 136
CLN LV+IH DK + ++V+
Sbjct: 83 CLNELVEIHKCHKDKDLDQMVI 104
>At4g16940.1 68417.m02555 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1103
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 71 CLNLLVQIHFSPSDKGISELVL 136
CLN LV+IH DK + ++V+
Sbjct: 76 CLNELVEIHKCHKDKDLDQMVI 97
>At3g26140.1 68416.m03261 glycosyl hydrolase family 5 protein /
cellulase family protein contains Pfam profile: PF00150
cellulase (glycosyl hydrolase family 5)
Length = 508
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -1
Query: 251 VSVTSFIAAAMSSYRSACSANL---ARCTSSSLSTDIVDDGRELIH*CPCRKGKN 96
+S TS + +S + + ++N+ A+ T++SL D+ + + C C KG++
Sbjct: 437 LSETSCSSPNLSEWETISASNMLLAAKSTNNSLCLDVDETNNLMASNCKCVKGED 491
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,838,459
Number of Sequences: 28952
Number of extensions: 125133
Number of successful extensions: 364
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 380568784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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