Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0025.Seq
         (439 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   2.7  
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    23   3.6  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   6.3  
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      22   8.3  
AY724805-1|AAW50314.1|  162|Anopheles gambiae G protein alpha su...    22   8.3  
AY724804-1|AAW50313.1|  163|Anopheles gambiae G protein alpha su...    22   8.3  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 311 VICF*HCACVWLEFYRFVGHVV 246
           + C   C  VWL+F  +V  +V
Sbjct: 784 IFCVWDCCWVWLKFQEWVAFIV 805


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 114 LYIHVPAHGARPITKH*IITYINSERNPHLHGH 212
           L ++VP +G      H +I +I+   N +L GH
Sbjct: 354 LSVNVPYYGNYHSLGHVLIGFIHDPDNLYLEGH 386


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +3

Query: 198 HLHGHQYKTTDTYLLTHNMPYESVK 272
           HLHGH ++      ++ N   E ++
Sbjct: 869 HLHGHAFRVVGMDRVSRNTTIEDIR 893


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 190 VIPIYTDISTKQRTHIYLHTTCPTNR*N 273
           ++ ++ D++      IY H TC T+  N
Sbjct: 303 ILRMFVDLNPDSEKIIYSHFTCATDTEN 330


>AY724805-1|AAW50314.1|  162|Anopheles gambiae G protein alpha
           subunit AgGq3 protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 190 VIPIYTDISTKQRTHIYLHTTCPTNR*N 273
           ++ ++ D++      IY H TC T+  N
Sbjct: 116 ILRMFVDLNPDSEKIIYSHFTCATDTEN 143


>AY724804-1|AAW50313.1|  163|Anopheles gambiae G protein alpha
           subunit AgGq2 protein.
          Length = 163

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 190 VIPIYTDISTKQRTHIYLHTTCPTNR*N 273
           ++ ++ D++      IY H TC T+  N
Sbjct: 117 ILRMFVDLNPDSEKIIYSHFTCATDTEN 144


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,273
Number of Sequences: 2352
Number of extensions: 10478
Number of successful extensions: 61
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36568146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)