Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0024.Seq
(368 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D55F1F Cluster: PREDICTED: similar to CG33113-PF... 72 4e-12
UniRef50_Q17NG9 Cluster: Reticulon/nogo; n=2; Endopterygota|Rep:... 69 4e-11
UniRef50_Q29L12 Cluster: GA17292-PA; n=1; Drosophila pseudoobscu... 62 4e-09
UniRef50_Q9VMV9 Cluster: CG33113-PF, isoform F; n=11; Endopteryg... 61 5e-09
UniRef50_Q4G5W2 Cluster: Reticulon 4-l; n=3; Danio rerio|Rep: Re... 52 3e-06
UniRef50_Q4FZ68 Cluster: RTN4-L; n=6; Euteleostei|Rep: RTN4-L - ... 49 3e-05
UniRef50_Q4S2Q0 Cluster: Chromosome 17 SCAF14760, whole genome s... 48 4e-05
UniRef50_Q7RTJ4 Cluster: RTN-B2; n=11; Ciona intestinalis|Rep: R... 48 7e-05
UniRef50_Q4G5X5 Cluster: Reticulon 1-A1; n=3; Tetraodontidae|Rep... 47 1e-04
UniRef50_UPI0000E4A8E3 Cluster: PREDICTED: similar to reticulon ... 46 2e-04
UniRef50_Q4G5V7 Cluster: Reticulon 5-a1; n=12; Danio rerio|Rep: ... 46 2e-04
UniRef50_Q4G5W7 Cluster: Reticulon 1-a1; n=3; Danio rerio|Rep: R... 46 2e-04
UniRef50_Q7L7Q6 Cluster: RTN4; n=42; Tetrapoda|Rep: RTN4 - Homo ... 46 2e-04
UniRef50_Q9NQC3 Cluster: Reticulon-4; n=72; Euteleostomi|Rep: Re... 46 2e-04
UniRef50_UPI0000EB300C Cluster: reticulon 1; n=1; Canis lupus fa... 45 4e-04
UniRef50_Q9ES97 Cluster: Reticulon-3; n=7; Murinae|Rep: Reticulo... 45 4e-04
UniRef50_O95197 Cluster: Reticulon-3; n=77; Euteleostomi|Rep: Re... 45 4e-04
UniRef50_Q16799 Cluster: Reticulon-1; n=53; Euteleostomi|Rep: Re... 45 4e-04
UniRef50_Q6JRV1 Cluster: RTN4.1-A2; n=11; Xenopus|Rep: RTN4.1-A2... 44 7e-04
UniRef50_Q4T187 Cluster: Chromosome undetermined SCAF10698, whol... 43 0.002
UniRef50_Q4G5V0 Cluster: Reticulon 6-a1; n=22; Danio rerio|Rep: ... 43 0.002
UniRef50_UPI000155BB4D Cluster: PREDICTED: similar to RTN2 prote... 42 0.003
UniRef50_O70622 Cluster: Reticulon-2; n=20; Eutheria|Rep: Reticu... 42 0.003
UniRef50_O75298 Cluster: Reticulon-2; n=8; Mammalia|Rep: Reticul... 42 0.003
UniRef50_A7SZV0 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.014
UniRef50_A7SJN6 Cluster: Predicted protein; n=1; Nematostella ve... 40 0.014
UniRef50_Q4FZ76 Cluster: RTN2-A; n=7; Xenopus|Rep: RTN2-A - Xeno... 39 0.025
UniRef50_Q4TTE6 Cluster: Reticulon; n=7; Caenorhabditis|Rep: Ret... 37 0.13
UniRef50_Q24199 Cluster: Tropomyosin-like protein; n=2; Drosophi... 35 0.41
UniRef50_Q5DE04 Cluster: SJCHGC02814 protein; n=1; Schistosoma j... 35 0.54
UniRef50_Q4G5T7 Cluster: Reticulon 8-c; n=6; Clupeocephala|Rep: ... 33 1.3
UniRef50_Q21313 Cluster: Laminin-like protein epi-1 precursor; n... 33 1.7
UniRef50_Q4G5K8 Cluster: Reticulon 2c; n=6; Clupeocephala|Rep: R... 32 3.8
UniRef50_UPI0000E23758 Cluster: PREDICTED: similar to KIAA0853 p... 31 8.9
UniRef50_Q2RZV1 Cluster: Peptidyl-prolyl cis-trans isomerase; n=... 31 8.9
UniRef50_Q00SK2 Cluster: Ubiquinone/menaquinone biosynthesi; n=2... 31 8.9
UniRef50_Q5T200 Cluster: Zinc finger CCCH domain-containing prot... 31 8.9
UniRef50_O51757 Cluster: UDP-N-acetylmuramate--L-alanine ligase;... 31 8.9
>UniRef50_UPI0000D55F1F Cluster: PREDICTED: similar to CG33113-PF,
isoform F; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG33113-PF, isoform F - Tribolium castaneum
Length = 479
Score = 71.7 bits (168), Expect = 4e-12
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = -3
Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRRAEGDKDK 106
LF+LPK YE NK Q+DANLE+ R K+ EIT+KV+AA+P+G++AE KD+
Sbjct: 431 LFSLPKVYETNKTQIDANLEIVRTKLAEITSKVKAAIPIGKKAEEKKDQ 479
Score = 52.8 bits (121), Expect = 2e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K GVLLW LTY+GA FNG+TLII+ W+
Sbjct: 400 DSIKFGVLLWTLTYLGAWFNGMTLIIIAWV 429
>UniRef50_Q17NG9 Cluster: Reticulon/nogo; n=2; Endopterygota|Rep:
Reticulon/nogo - Aedes aegypti (Yellowfever mosquito)
Length = 493
Score = 68.5 bits (160), Expect = 4e-11
Identities = 30/49 (61%), Positives = 40/49 (81%)
Frame = -3
Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRRAEGDKDK 106
LFTLPK YE NK +DA LEL R+KI E++ K++AAVP+G++AE +KDK
Sbjct: 445 LFTLPKVYENNKQSIDAYLELVRSKILEVSDKIKAAVPIGKKAETEKDK 493
Score = 47.2 bits (107), Expect = 1e-04
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K GV+L+CLTYVGA FNG+T +I+ ++
Sbjct: 414 DSIKFGVVLYCLTYVGAIFNGMTCVIIAFV 443
>UniRef50_Q29L12 Cluster: GA17292-PA; n=1; Drosophila
pseudoobscura|Rep: GA17292-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 547
Score = 61.7 bits (143), Expect = 4e-09
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Frame = -3
Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR-----AEGDKDK 106
+LFTLPK YE NK +D L+L R+K+ EIT K+R A+P+G + AE DKDK
Sbjct: 493 SLFTLPKVYENNKQSIDTYLDLVRSKLTEITDKIRVAIPIGNKKPVAAAESDKDK 547
Score = 47.6 bits (108), Expect = 7e-05
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K GV+LW TY+GA FNG+TL+IL ++
Sbjct: 463 DSIKFGVILWVFTYIGAWFNGMTLVILAFV 492
>UniRef50_Q9VMV9 Cluster: CG33113-PF, isoform F; n=11;
Endopterygota|Rep: CG33113-PF, isoform F - Drosophila
melanogaster (Fruit fly)
Length = 595
Score = 61.3 bits (142), Expect = 5e-09
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = -3
Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR-----AEGDKDK 106
+LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+G + AE +KDK
Sbjct: 541 SLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPIGNKKPEAAAESEKDK 595
Score = 48.0 bits (109), Expect = 5e-05
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K GV+LW TYVGA FNG+TL+IL ++
Sbjct: 511 DSIKFGVILWVFTYVGAWFNGMTLVILAFV 540
>UniRef50_Q4G5W2 Cluster: Reticulon 4-l; n=3; Danio rerio|Rep:
Reticulon 4-l - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 322
Score = 52.0 bits (119), Expect = 3e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DSLK VL+W LTYVGA FNG+TLIILG+I
Sbjct: 247 DSLKFAVLMWILTYVGALFNGLTLIILGFI 276
>UniRef50_Q4FZ68 Cluster: RTN4-L; n=6; Euteleostei|Rep: RTN4-L -
Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri)
Length = 383
Score = 48.8 bits (111), Expect = 3e-05
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DSLK VL+W LTYVGA FNG+TL ILG +
Sbjct: 307 DSLKFAVLMWILTYVGALFNGLTLFILGLV 336
Score = 31.5 bits (68), Expect = 5.1
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -3
Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRRAEGD 115
+F+ P YE K Q+D + +A + +I A V++ VP +R + +
Sbjct: 338 MFSCPIVYEKYKVQIDHYVGMANKHVKDIIATVQSKVPGLKRVKAE 383
>UniRef50_Q4S2Q0 Cluster: Chromosome 17 SCAF14760, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF14760, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 991
Score = 48.4 bits (110), Expect = 4e-05
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DSLK L+W LTYVGA FNG+TL+ILG I
Sbjct: 916 DSLKFAALMWILTYVGALFNGLTLLILGLI 945
Score = 35.5 bits (78), Expect = 0.31
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -3
Query: 261 LDTLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP-LGRRAE 121
L +F+ P YE ++AQ+D L L ++ +I K++A VP + R+ E
Sbjct: 944 LIAVFSCPIVYEKHQAQIDHYLALVNNQVKDIVGKIQAKVPGMKRKTE 991
>UniRef50_Q7RTJ4 Cluster: RTN-B2; n=11; Ciona intestinalis|Rep:
RTN-B2 - Ciona intestinalis (Transparent sea squirt)
Length = 377
Score = 47.6 bits (108), Expect = 7e-05
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -1
Query: 341 SLKXGVLLWCLTYVGACFNGITLIILGWI 255
SLK V +W LTY+G CFNG+TL+ILG I
Sbjct: 303 SLKFAVFMWLLTYIGCCFNGLTLLILGVI 331
>UniRef50_Q4G5X5 Cluster: Reticulon 1-A1; n=3; Tetraodontidae|Rep:
Reticulon 1-A1 - Fugu rubripes (Japanese pufferfish)
(Takifugu rubripes)
Length = 729
Score = 46.8 bits (106), Expect = 1e-04
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264
DSLK VL+W LTYVGA FNG+TL+IL
Sbjct: 654 DSLKFAVLMWLLTYVGALFNGLTLLIL 680
Score = 42.7 bits (96), Expect = 0.002
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = -3
Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRRAE 121
++FT+P YE ++AQ+D + L R +N + K++A +P +R E
Sbjct: 684 SMFTMPVVYEKHQAQIDQYVGLIRTHVNSVVGKIQAKIPGAKRKE 728
>UniRef50_UPI0000E4A8E3 Cluster: PREDICTED: similar to reticulon 4
isoform B2; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to reticulon 4 isoform B2 -
Strongylocentrotus purpuratus
Length = 943
Score = 46.4 bits (105), Expect = 2e-04
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K V LW LTYVGA FNG+TLIIL +I
Sbjct: 868 DSIKFAVGLWLLTYVGAWFNGLTLIILAYI 897
Score = 31.1 bits (67), Expect = 6.7
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRRAE 121
LF++P YE +AQ+D + A+ +IN ++ +P ++ E
Sbjct: 899 LFSMPVVYEKYQAQIDDAVGKAQEQINTALTNIKTKIPWLKKKE 942
>UniRef50_Q4G5V7 Cluster: Reticulon 5-a1; n=12; Danio rerio|Rep:
Reticulon 5-a1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 818
Score = 46.4 bits (105), Expect = 2e-04
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K VL+W LTYVGA FNG+TL+IL I
Sbjct: 744 DSIKFAVLMWLLTYVGALFNGLTLLILAVI 773
Score = 38.7 bits (86), Expect = 0.033
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -3
Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRRAE 121
++F++P YE + Q+D L L R ++N + K+R VP ++ E
Sbjct: 774 SMFSVPVVYEKYQTQIDQYLGLVRTQVNSVMGKIREKVPGAKKKE 818
>UniRef50_Q4G5W7 Cluster: Reticulon 1-a1; n=3; Danio rerio|Rep:
Reticulon 1-a1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 767
Score = 46.0 bits (104), Expect = 2e-04
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264
DSLK VL+W LTYVGA FNG+TL+I+
Sbjct: 692 DSLKFAVLMWLLTYVGALFNGLTLLIM 718
Score = 39.9 bits (89), Expect = 0.014
Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = -3
Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP-LGRRAE 121
+F++P YE +AQ+D ++L R ++N + AK++ VP R+AE
Sbjct: 723 MFSMPVVYEKYQAQIDQYVDLIRTQVNSVVAKIQEKVPGTKRKAE 767
>UniRef50_Q7L7Q6 Cluster: RTN4; n=42; Tetrapoda|Rep: RTN4 - Homo
sapiens (Human)
Length = 373
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DSLK VL+W TYVGA FNG+TL+IL I
Sbjct: 298 DSLKFAVLMWVFTYVGALFNGLTLLILALI 327
Score = 40.3 bits (90), Expect = 0.011
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = -3
Query: 261 LDTLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP-LGRRAE 121
L +LF++P YE ++AQ+D L LA + + AK++A +P L R+AE
Sbjct: 326 LISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKIPGLKRKAE 373
>UniRef50_Q9NQC3 Cluster: Reticulon-4; n=72; Euteleostomi|Rep:
Reticulon-4 - Homo sapiens (Human)
Length = 1192
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DSLK VL+W TYVGA FNG+TL+IL I
Sbjct: 1117 DSLKFAVLMWVFTYVGALFNGLTLLILALI 1146
Score = 40.3 bits (90), Expect = 0.011
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = -3
Query: 261 LDTLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP-LGRRAE 121
L +LF++P YE ++AQ+D L LA + + AK++A +P L R+AE
Sbjct: 1145 LISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKIPGLKRKAE 1192
>UniRef50_UPI0000EB300C Cluster: reticulon 1; n=1; Canis lupus
familiaris|Rep: reticulon 1 - Canis familiaris
Length = 689
Score = 45.2 bits (102), Expect = 4e-04
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264
DSLK VL+W LTYVGA FNG+TL+++
Sbjct: 614 DSLKFAVLMWLLTYVGALFNGLTLLLM 640
Score = 42.3 bits (95), Expect = 0.003
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = -3
Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR 127
++FTLP Y ++AQ+D L L R IN + AK++A +P +R
Sbjct: 644 SMFTLPVVYVKHQAQIDQYLGLVRTHINTVVAKIQAKIPGAKR 686
>UniRef50_Q9ES97 Cluster: Reticulon-3; n=7; Murinae|Rep: Reticulon-3
- Mus musculus (Mouse)
Length = 964
Score = 45.2 bits (102), Expect = 4e-04
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264
DSLK V +W +TYVGA FNGITL+IL
Sbjct: 888 DSLKLAVFMWLMTYVGAVFNGITLLIL 914
Score = 31.5 bits (68), Expect = 5.1
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP 139
+F++P YE K Q+D + +AR + I K++A +P
Sbjct: 919 VFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKIQAKLP 956
>UniRef50_O95197 Cluster: Reticulon-3; n=77; Euteleostomi|Rep:
Reticulon-3 - Homo sapiens (Human)
Length = 1032
Score = 45.2 bits (102), Expect = 4e-04
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264
DSLK V +W +TYVGA FNGITL+IL
Sbjct: 956 DSLKLAVFMWLMTYVGAVFNGITLLIL 982
Score = 31.9 bits (69), Expect = 3.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP 139
+F++P YE K Q+D + +AR + I K++A +P
Sbjct: 987 IFSVPIVYEKYKTQIDHYVGIARDQTKSIVEKIQAKLP 1024
>UniRef50_Q16799 Cluster: Reticulon-1; n=53; Euteleostomi|Rep:
Reticulon-1 - Homo sapiens (Human)
Length = 776
Score = 45.2 bits (102), Expect = 4e-04
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264
DSLK VL+W LTYVGA FNG+TL+++
Sbjct: 701 DSLKFAVLMWLLTYVGALFNGLTLLLM 727
Score = 42.3 bits (95), Expect = 0.003
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = -3
Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR 127
++FTLP Y ++AQ+D L L R IN + AK++A +P +R
Sbjct: 731 SMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKIPGAKR 773
>UniRef50_Q6JRV1 Cluster: RTN4.1-A2; n=11; Xenopus|Rep: RTN4.1-A2 -
Xenopus laevis (African clawed frog)
Length = 1055
Score = 44.4 bits (100), Expect = 7e-04
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DSLK VL+W TY+GA FNG+TL+I+ I
Sbjct: 980 DSLKFAVLMWVFTYIGALFNGLTLLIVALI 1009
>UniRef50_Q4T187 Cluster: Chromosome undetermined SCAF10698, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10698,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 214
Score = 42.7 bits (96), Expect = 0.002
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264
DSLK ++W +TYVGA FNG+TL+I+
Sbjct: 137 DSLKVATVMWVMTYVGAIFNGVTLLII 163
>UniRef50_Q4G5V0 Cluster: Reticulon 6-a1; n=22; Danio rerio|Rep:
Reticulon 6-a1 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 875
Score = 42.7 bits (96), Expect = 0.002
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DSLK V LW LTYVG+ FNG+TL+I+ I
Sbjct: 800 DSLKLAVGLWLLTYVGSWFNGLTLLIIALI 829
>UniRef50_UPI000155BB4D Cluster: PREDICTED: similar to RTN2 protein,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to RTN2 protein, partial - Ornithorhynchus
anatinus
Length = 188
Score = 42.3 bits (95), Expect = 0.003
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DSLK +L + LT+VGA FNG+TL+ILG I
Sbjct: 118 DSLKLALLFYILTFVGAVFNGLTLLILGVI 147
>UniRef50_O70622 Cluster: Reticulon-2; n=20; Eutheria|Rep:
Reticulon-2 - Mus musculus (Mouse)
Length = 471
Score = 42.3 bits (95), Expect = 0.003
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILG 261
DSLK +L + LT+VGA FNG+TL+ILG
Sbjct: 384 DSLKLALLFYILTFVGAIFNGLTLVILG 411
Score = 36.7 bits (81), Expect = 0.13
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -3
Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP 139
LFT+P Y ++AQ+D + L +++ I AK+RA +P
Sbjct: 415 LFTVPLLYRQHQAQIDQYVGLVTNQLSHIKAKIRAKIP 452
>UniRef50_O75298 Cluster: Reticulon-2; n=8; Mammalia|Rep:
Reticulon-2 - Homo sapiens (Human)
Length = 545
Score = 42.3 bits (95), Expect = 0.003
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DSLK +L + LT+VGA FNG+TL+ILG I
Sbjct: 457 DSLKLALLFYILTFVGAIFNGLTLLILGVI 486
Score = 37.1 bits (82), Expect = 0.10
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -3
Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVP 139
LFT+P Y ++AQ+D + L +++ I AK+RA +P
Sbjct: 488 LFTIPLLYRQHQAQIDQYVGLVTNQLSHIKAKIRAKIP 525
>UniRef50_A7SZV0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 177
Score = 39.9 bits (89), Expect = 0.014
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLII 267
DS+K GV+LW L+YVGA F+ +TLII
Sbjct: 115 DSIKFGVMLWVLSYVGAWFSMLTLII 140
>UniRef50_A7SJN6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 39.9 bits (89), Expect = 0.014
Identities = 14/41 (34%), Positives = 29/41 (70%)
Frame = -3
Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGR 130
LFT+PKAY+M + ++++ + + ++++ K+ AAVPL +
Sbjct: 147 LFTVPKAYDMYREEINSAMSTIKVAVDDLLDKINAAVPLAK 187
Score = 32.3 bits (70), Expect = 2.9
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K V+L+ L+Y+ F+GITL +G+I
Sbjct: 116 DSIKLLVVLYILSYLAQWFSGITLTFIGFI 145
>UniRef50_Q4FZ76 Cluster: RTN2-A; n=7; Xenopus|Rep: RTN2-A - Xenopus
laevis (African clawed frog)
Length = 321
Score = 39.1 bits (87), Expect = 0.025
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264
DSLK V+++ LTYVGA FNGIT+++L
Sbjct: 246 DSLKFLVIVYLLTYVGAVFNGITVLLL 272
>UniRef50_Q4TTE6 Cluster: Reticulon; n=7; Caenorhabditis|Rep:
Reticulon - Caenorhabditis remanei
Length = 222
Score = 36.7 bits (81), Expect = 0.13
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIIL 264
+S+K G++LW LTYV + F+G TL +L
Sbjct: 139 ESIKFGLILWSLTYVASWFSGCTLAVL 165
>UniRef50_Q24199 Cluster: Tropomyosin-like protein; n=2; Drosophila
melanogaster|Rep: Tropomyosin-like protein - Drosophila
melanogaster (Fruit fly)
Length = 158
Score = 35.1 bits (77), Expect = 0.41
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILG 261
DSLK VLL + +G CFNG+TL+I G
Sbjct: 120 DSLKFLVLLCGINLLGDCFNGLTLLIFG 147
>UniRef50_Q5DE04 Cluster: SJCHGC02814 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02814 protein - Schistosoma
japonicum (Blood fluke)
Length = 214
Score = 34.7 bits (76), Expect = 0.54
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -1
Query: 341 SLKXGVLLWCLTYVGACFNGITLIIL 264
S+K VLL+ LTY+GA FN +TL IL
Sbjct: 132 SIKFAVLLYLLTYIGAQFNFLTLCIL 157
Score = 34.7 bits (76), Expect = 0.54
Identities = 13/37 (35%), Positives = 27/37 (72%)
Frame = -3
Query: 252 LFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAV 142
+F +PK YE + ++D LELA++KI+ + ++V++ +
Sbjct: 162 IFCVPKFYERYQPEIDKILELAKSKIDMVVSQVKSQI 198
>UniRef50_Q4G5T7 Cluster: Reticulon 8-c; n=6; Clupeocephala|Rep:
Reticulon 8-c - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 208
Score = 33.5 bits (73), Expect = 1.3
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K V L+ LTYVG NG+TL++ G I
Sbjct: 117 DSVKFIVFLYLLTYVGVQANGLTLVMSGVI 146
>UniRef50_Q21313 Cluster: Laminin-like protein epi-1 precursor; n=4;
Caenorhabditis|Rep: Laminin-like protein epi-1 precursor
- Caenorhabditis elegans
Length = 3672
Score = 33.1 bits (72), Expect = 1.7
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = -3
Query: 261 LDTLFTLPKAYEMNKAQVDANLELARAKINEITAK 157
LD++ + E KA++DAN+E RAKI+EI K
Sbjct: 2582 LDSIDEKVQEVEKLKAEIDANIEETRAKISEIAGK 2616
>UniRef50_Q4G5K8 Cluster: Reticulon 2c; n=6; Clupeocephala|Rep:
Reticulon 2c - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 203
Score = 31.9 bits (69), Expect = 3.8
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = -1
Query: 341 SLKXGVLLWCLTYVGACFNGITLIILGWI 255
SLK +L++ +T++G NG+TLII+G I
Sbjct: 118 SLKFWLLMYVVTFLGNLCNGLTLIIIGVI 146
>UniRef50_UPI0000E23758 Cluster: PREDICTED: similar to KIAA0853
protein; n=1; Pan troglodytes|Rep: PREDICTED: similar to
KIAA0853 protein - Pan troglodytes
Length = 1312
Score = 30.7 bits (66), Expect = 8.9
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 241 QREQRIQPRMMSVIPLKHAPTYVRHHSST 327
QRE+R +PR S H+P RHHSS+
Sbjct: 307 QREKRDKPRSTSPAGQHHSPISSRHHSSS 335
>UniRef50_Q2RZV1 Cluster: Peptidyl-prolyl cis-trans isomerase; n=2;
Bacteria|Rep: Peptidyl-prolyl cis-trans isomerase -
Salinibacter ruber (strain DSM 13855)
Length = 706
Score = 30.7 bits (66), Expect = 8.9
Identities = 19/41 (46%), Positives = 20/41 (48%)
Frame = -3
Query: 258 DTLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPL 136
D L T P + KAQVD N L R KI A VRA L
Sbjct: 59 DDLLTRPALQAVVKAQVDRNGALLREKIGADDADVRARAAL 99
>UniRef50_Q00SK2 Cluster: Ubiquinone/menaquinone biosynthesi; n=2;
Ostreococcus|Rep: Ubiquinone/menaquinone biosynthesi -
Ostreococcus tauri
Length = 434
Score = 30.7 bits (66), Expect = 8.9
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = -3
Query: 324 AAVVPHVRGGVLQRDHAHHPRLD--TLFTLPKAYEMNKAQVDANLELARAKINEITAKVR 151
+++ HV + DHAH R + T +A + VDA + R + ++ A+V
Sbjct: 5 SSITAHVTANRVNVDHAHQRRRRGRSSTTCRRATNASSPAVDAPADAFRRALEDVRARVN 64
Query: 150 AAVPL-GRRA 124
A+P+ RRA
Sbjct: 65 DALPVEARRA 74
>UniRef50_Q5T200 Cluster: Zinc finger CCCH domain-containing protein
13; n=32; cellular organisms|Rep: Zinc finger CCCH
domain-containing protein 13 - Homo sapiens (Human)
Length = 1668
Score = 30.7 bits (66), Expect = 8.9
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 241 QREQRIQPRMMSVIPLKHAPTYVRHHSST 327
QRE+R +PR S H+P RHHSS+
Sbjct: 307 QREKRDKPRSTSPAGQHHSPISSRHHSSS 335
>UniRef50_O51757 Cluster: UDP-N-acetylmuramate--L-alanine ligase;
n=3; Borrelia burgdorferi group|Rep:
UDP-N-acetylmuramate--L-alanine ligase - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 468
Score = 30.7 bits (66), Expect = 8.9
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 330 RRAAVVPHVRGGVLQRDHAHHPR--LDTLFTLPKAYEMNKAQVD 205
RR VV G + D+AHHPR +TLF + Y+ + +D
Sbjct: 328 RRVEVVKEENGVIYMDDYAHHPREIKNTLFGIKNFYKNKRIILD 371
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,725,854
Number of Sequences: 1657284
Number of extensions: 2538254
Number of successful extensions: 9007
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 8822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9007
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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