Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0024.Seq
         (368 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY604022-1|AAT38516.1|  172|Anopheles gambiae LZ3788P protein.         25   0.90 
AY330175-1|AAQ16281.1|  200|Anopheles gambiae odorant-binding pr...    25   0.90 
AJ618919-1|CAF01998.1|  200|Anopheles gambiae putative odorant-b...    25   0.90 
AF533512-1|AAM97673.1|  200|Anopheles gambiae odorant binding pr...    25   0.90 
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    22   6.4  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    22   6.4  

>AY604022-1|AAT38516.1|  172|Anopheles gambiae LZ3788P protein.
          Length = 172

 Score = 25.0 bits (52), Expect = 0.90
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 297 GVLQRDHAHHPRLDTLFTLPKAYEMNKAQVDANLELARAKINEITA 160
           G+L+RD      +D +   P+   + +   +A  ELA  K++EI A
Sbjct: 70  GMLKRDDLSKMFMDAVKDKPEWMSLVRDATNACFELAEKKMDEIEA 115


>AY330175-1|AAQ16281.1|  200|Anopheles gambiae odorant-binding
           protein AgamOBP48 protein.
          Length = 200

 Score = 25.0 bits (52), Expect = 0.90
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 297 GVLQRDHAHHPRLDTLFTLPKAYEMNKAQVDANLELARAKINEITA 160
           G+L+RD      +D +   P+   + +   +A  ELA  K++EI A
Sbjct: 98  GMLKRDDLSKMFMDAVKDKPEWMSLVRDATNACFELAEKKMDEIEA 143


>AJ618919-1|CAF01998.1|  200|Anopheles gambiae putative
           odorant-binding protein OBP3788 protein.
          Length = 200

 Score = 25.0 bits (52), Expect = 0.90
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 297 GVLQRDHAHHPRLDTLFTLPKAYEMNKAQVDANLELARAKINEITA 160
           G+L+RD      +D +   P+   + +   +A  ELA  K++EI A
Sbjct: 98  GMLKRDDLSKMFMDAVKDKPEWMSLVRDATNACFELAEKKMDEIEA 143


>AF533512-1|AAM97673.1|  200|Anopheles gambiae odorant binding
           protein-8 protein.
          Length = 200

 Score = 25.0 bits (52), Expect = 0.90
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 297 GVLQRDHAHHPRLDTLFTLPKAYEMNKAQVDANLELARAKINEITA 160
           G+L+RD      +D +   P+   + +   +A  ELA  K++EI A
Sbjct: 98  GMLKRDDLSKMFMDAVKDKPEWMSLVRDATNACFELAEKKMDEIEA 143


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 279 HAHHPRLDTLFTLPKAYEMNKAQVDANLELARA 181
           H  HP L  L T+ KAYE  KA +++  +  R+
Sbjct: 89  HDDHPFL--LETVAKAYEPFKAALESEQDAHRS 119


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 174  NEITAKVRAAVPLGRRAEGDKDK 106
            +E +  V A  P+GR A   KDK
Sbjct: 1025 SETSTPVAATTPVGRMAAVPKDK 1047


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,699
Number of Sequences: 2352
Number of extensions: 2698
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27944475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)