Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0024.Seq
(368 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011111-1|AAR82778.1| 458|Drosophila melanogaster LD43688p pro... 61 4e-10
AY069432-1|AAL39577.1| 234|Drosophila melanogaster LD14068p pro... 61 4e-10
AE014134-840|AAF52196.1| 202|Drosophila melanogaster CG33113-PC... 61 4e-10
AE014134-839|AAF52195.1| 222|Drosophila melanogaster CG33113-PA... 61 4e-10
AE014134-838|AAS64638.1| 224|Drosophila melanogaster CG33113-PG... 61 4e-10
AE014134-837|AAF52198.2| 224|Drosophila melanogaster CG33113-PD... 61 4e-10
AE014134-836|AAF52194.1| 234|Drosophila melanogaster CG33113-PE... 61 4e-10
AE014134-835|AAF52197.2| 234|Drosophila melanogaster CG33113-PB... 61 4e-10
AE014134-834|AAF52199.2| 595|Drosophila melanogaster CG33113-PF... 61 4e-10
U51048-1|AAB01147.1| 158|Drosophila melanogaster tropomyosin-li... 35 0.029
AE014297-625|AAF54008.1| 154|Drosophila melanogaster CG1279-PA ... 35 0.029
X53959-1|CAA37910.1| 1480|Drosophila melanogaster slit protein p... 27 7.7
M23543-1|AAA72722.1| 530|Drosophila melanogaster protein ( Dros... 27 7.7
AF126540-1|AAD26567.1| 1504|Drosophila melanogaster slit protein... 27 7.7
AE013599-2126|AAF58097.1| 1504|Drosophila melanogaster CG8355-PC... 27 7.7
AE013599-2125|AAF58098.1| 1480|Drosophila melanogaster CG8355-PA... 27 7.7
AE013599-2124|AAM70966.1| 1469|Drosophila melanogaster CG8355-PB... 27 7.7
>BT011111-1|AAR82778.1| 458|Drosophila melanogaster LD43688p
protein.
Length = 458
Score = 61.3 bits (142), Expect = 4e-10
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = -3
Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR-----AEGDKDK 106
+LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+G + AE +KDK
Sbjct: 404 SLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPIGNKKPEAAAESEKDK 458
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K GV+LW TYVGA FNG+TL+IL ++
Sbjct: 374 DSIKFGVILWVFTYVGAWFNGMTLVILAFV 403
>AY069432-1|AAL39577.1| 234|Drosophila melanogaster LD14068p
protein.
Length = 234
Score = 61.3 bits (142), Expect = 4e-10
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = -3
Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR-----AEGDKDK 106
+LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+G + AE +KDK
Sbjct: 180 SLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPIGNKKPEAAAESEKDK 234
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K GV+LW TYVGA FNG+TL+IL ++
Sbjct: 150 DSIKFGVILWVFTYVGAWFNGMTLVILAFV 179
>AE014134-840|AAF52196.1| 202|Drosophila melanogaster CG33113-PC,
isoform C protein.
Length = 202
Score = 61.3 bits (142), Expect = 4e-10
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = -3
Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR-----AEGDKDK 106
+LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+G + AE +KDK
Sbjct: 148 SLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPIGNKKPEAAAESEKDK 202
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K GV+LW TYVGA FNG+TL+IL ++
Sbjct: 118 DSIKFGVILWVFTYVGAWFNGMTLVILAFV 147
>AE014134-839|AAF52195.1| 222|Drosophila melanogaster CG33113-PA,
isoform A protein.
Length = 222
Score = 61.3 bits (142), Expect = 4e-10
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = -3
Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR-----AEGDKDK 106
+LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+G + AE +KDK
Sbjct: 168 SLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPIGNKKPEAAAESEKDK 222
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K GV+LW TYVGA FNG+TL+IL ++
Sbjct: 138 DSIKFGVILWVFTYVGAWFNGMTLVILAFV 167
>AE014134-838|AAS64638.1| 224|Drosophila melanogaster CG33113-PG,
isoform G protein.
Length = 224
Score = 61.3 bits (142), Expect = 4e-10
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = -3
Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR-----AEGDKDK 106
+LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+G + AE +KDK
Sbjct: 170 SLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPIGNKKPEAAAESEKDK 224
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K GV+LW TYVGA FNG+TL+IL ++
Sbjct: 140 DSIKFGVILWVFTYVGAWFNGMTLVILAFV 169
>AE014134-837|AAF52198.2| 224|Drosophila melanogaster CG33113-PD,
isoform D protein.
Length = 224
Score = 61.3 bits (142), Expect = 4e-10
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = -3
Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR-----AEGDKDK 106
+LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+G + AE +KDK
Sbjct: 170 SLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPIGNKKPEAAAESEKDK 224
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K GV+LW TYVGA FNG+TL+IL ++
Sbjct: 140 DSIKFGVILWVFTYVGAWFNGMTLVILAFV 169
>AE014134-836|AAF52194.1| 234|Drosophila melanogaster CG33113-PE,
isoform E protein.
Length = 234
Score = 61.3 bits (142), Expect = 4e-10
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = -3
Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR-----AEGDKDK 106
+LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+G + AE +KDK
Sbjct: 180 SLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPIGNKKPEAAAESEKDK 234
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K GV+LW TYVGA FNG+TL+IL ++
Sbjct: 150 DSIKFGVILWVFTYVGAWFNGMTLVILAFV 179
>AE014134-835|AAF52197.2| 234|Drosophila melanogaster CG33113-PB,
isoform B protein.
Length = 234
Score = 61.3 bits (142), Expect = 4e-10
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = -3
Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR-----AEGDKDK 106
+LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+G + AE +KDK
Sbjct: 180 SLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPIGNKKPEAAAESEKDK 234
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K GV+LW TYVGA FNG+TL+IL ++
Sbjct: 150 DSIKFGVILWVFTYVGAWFNGMTLVILAFV 179
>AE014134-834|AAF52199.2| 595|Drosophila melanogaster CG33113-PF,
isoform F protein.
Length = 595
Score = 61.3 bits (142), Expect = 4e-10
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Frame = -3
Query: 255 TLFTLPKAYEMNKAQVDANLELARAKINEITAKVRAAVPLGRR-----AEGDKDK 106
+LFTLPK YE NK +D +L+L R+K+ EIT K+R A+P+G + AE +KDK
Sbjct: 541 SLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPIGNKKPEAAAESEKDK 595
Score = 48.0 bits (109), Expect = 4e-06
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILGWI 255
DS+K GV+LW TYVGA FNG+TL+IL ++
Sbjct: 511 DSIKFGVILWVFTYVGAWFNGMTLVILAFV 540
>U51048-1|AAB01147.1| 158|Drosophila melanogaster tropomyosin-like
protein protein.
Length = 158
Score = 35.1 bits (77), Expect = 0.029
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILG 261
DSLK VLL + +G CFNG+TL+I G
Sbjct: 120 DSLKFLVLLCGINLLGDCFNGLTLLIFG 147
>AE014297-625|AAF54008.1| 154|Drosophila melanogaster CG1279-PA
protein.
Length = 154
Score = 35.1 bits (77), Expect = 0.029
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -1
Query: 344 DSLKXGVLLWCLTYVGACFNGITLIILG 261
DSLK VLL + +G CFNG+TL+I G
Sbjct: 116 DSLKFLVLLCGINLLGDCFNGLTLLIFG 143
>X53959-1|CAA37910.1| 1480|Drosophila melanogaster slit protein
protein.
Length = 1480
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 264 EDDERDPVEARPHVREAP 317
EDDE+D ++ PH++E P
Sbjct: 1336 EDDEQDFMDETPHIKEEP 1353
>M23543-1|AAA72722.1| 530|Drosophila melanogaster protein (
Drosophila melanogasterslit locus encoding a protein
associated with neural developmentwith 52D EGF
homologous domains gene, exons 1 and 2 (partial). ).
Length = 530
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 264 EDDERDPVEARPHVREAP 317
EDDE+D ++ PH++E P
Sbjct: 455 EDDEQDFMDETPHIKEEP 472
>AF126540-1|AAD26567.1| 1504|Drosophila melanogaster slit protein
protein.
Length = 1504
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 264 EDDERDPVEARPHVREAP 317
EDDE+D ++ PH++E P
Sbjct: 1360 EDDEQDFMDETPHIKEEP 1377
>AE013599-2126|AAF58097.1| 1504|Drosophila melanogaster CG8355-PC,
isoform C protein.
Length = 1504
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 264 EDDERDPVEARPHVREAP 317
EDDE+D ++ PH++E P
Sbjct: 1360 EDDEQDFMDETPHIKEEP 1377
>AE013599-2125|AAF58098.1| 1480|Drosophila melanogaster CG8355-PA,
isoform A protein.
Length = 1480
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 264 EDDERDPVEARPHVREAP 317
EDDE+D ++ PH++E P
Sbjct: 1336 EDDEQDFMDETPHIKEEP 1353
>AE013599-2124|AAM70966.1| 1469|Drosophila melanogaster CG8355-PB,
isoform B protein.
Length = 1469
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 264 EDDERDPVEARPHVREAP 317
EDDE+D ++ PH++E P
Sbjct: 1336 EDDEQDFMDETPHIKEEP 1353
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,924,496
Number of Sequences: 53049
Number of extensions: 118088
Number of successful extensions: 406
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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