Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0023.Seq
(379 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 128 4e-29
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 122 2e-27
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 105 3e-22
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 102 3e-21
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 90 1e-17
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 87 1e-16
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 69 2e-11
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 68 7e-11
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 62 3e-09
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 56 3e-07
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 54 1e-06
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 45 4e-04
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 42 0.005
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 41 0.009
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 38 0.082
UniRef50_A7QEJ3 Cluster: Chromosome chr17 scaffold_85, whole gen... 37 0.11
UniRef50_UPI00006CF2E6 Cluster: hypothetical protein TTHERM_0005... 35 0.44
UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2; ... 34 0.76
UniRef50_A2DGN8 Cluster: Putative uncharacterized protein; n=1; ... 34 1.0
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 33 2.3
UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides im... 33 2.3
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 33 2.3
UniRef50_UPI000155EEEB Cluster: PREDICTED: similar to leukocyte ... 32 3.1
UniRef50_UPI0000E24B4A Cluster: PREDICTED: hypothetical protein;... 32 4.1
UniRef50_Q1L966 Cluster: Novel protein similar to vertebrate ata... 32 4.1
UniRef50_Q23YT2 Cluster: Kinesin motor domain containing protein... 32 4.1
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 32 4.1
UniRef50_Q2UC38 Cluster: Predicted protein; n=1; Aspergillus ory... 31 5.4
UniRef50_UPI00006CFE90 Cluster: hypothetical protein TTHERM_0069... 31 7.1
UniRef50_Q313Z4 Cluster: Putative uncharacterized protein; n=1; ... 31 7.1
UniRef50_Q1Q4N9 Cluster: Similar to glycosyltransferase family 2... 31 7.1
UniRef50_A3VR62 Cluster: Putative uncharacterized protein; n=1; ... 31 7.1
UniRef50_Q9VX38 Cluster: CG8326-PA; n=3; Sophophora|Rep: CG8326-... 31 7.1
UniRef50_Q4PIM6 Cluster: Putative uncharacterized protein; n=1; ... 31 7.1
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 31 7.1
UniRef50_UPI000034E948 Cluster: UPI000034E948 related cluster; n... 31 9.4
UniRef50_Q21DT8 Cluster: ABC-1; n=1; Saccharophagus degradans 2-... 31 9.4
UniRef50_Q1J3G2 Cluster: Integrase, catalytic region; n=1; Deino... 31 9.4
UniRef50_Q6L9N8 Cluster: Uromodulin-like 1 protein variant 2; n=... 31 9.4
UniRef50_Q4WAY8 Cluster: C6 finger transcription factor, putativ... 31 9.4
UniRef50_Q4P582 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
UniRef50_Q0CZ74 Cluster: 2-C-methyl-D-erythritol 2,4-cyclodiphos... 31 9.4
UniRef50_A2QIG4 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
UniRef50_Q8BJM3 Cluster: Growth inhibition and differentiation-r... 31 9.4
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 128 bits (308), Expect = 4e-29
Identities = 72/131 (54%), Positives = 84/131 (64%), Gaps = 7/131 (5%)
Frame = -3
Query: 377 VXCIGFTNKDSLSQRKTCYGPAHSGQSNQKENV*NHYTRRHNS-ELREVVNKLIPDSIAK 201
V CIGFT KDS+SQRKTCY HS N + + R S +L+ VV KL+PDSIAK
Sbjct: 140 VFCIGFTIKDSMSQRKTCYAQ-HSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAK 198
Query: 200 DIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGDKS------ERP 39
DIEKAC +YPL DV IRKVKVLK+PRF++S LMELH + +RP
Sbjct: 199 DIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGDGGGKAAEVSTGAASGVVVDRP 258
Query: 38 EGYEPPVQESV 6
EGYEPPVQ SV
Sbjct: 259 EGYEPPVQASV 269
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 122 bits (294), Expect = 2e-27
Identities = 65/126 (51%), Positives = 80/126 (63%), Gaps = 4/126 (3%)
Frame = -3
Query: 371 CIGFTNKDSLSQRKTCYGPAHSGQSNQKENV*NHYTRRHNSELREVVNKLIPDSIAKDIE 192
C+GFT K + RKT Y + +K+ + ++L+EVVNKLIPDSI KDIE
Sbjct: 139 CVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIE 198
Query: 191 KACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGD----KSERPEGYEP 24
KAC IYPL DV +RKVK+LK+P+FE+ KLMELH GD K ER +GYEP
Sbjct: 199 KACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEP 258
Query: 23 PVQESV 6
PVQESV
Sbjct: 259 PVQESV 264
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 105 bits (252), Expect = 3e-22
Identities = 53/86 (61%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
Frame = -3
Query: 251 SELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXX 72
++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 126 NDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGCSS 185
Query: 71 XXXXGD----KSERPEGYEPPVQESV 6
GD K ER +GYE PVQESV
Sbjct: 186 GKATGDETGVKVERADGYELPVQESV 211
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 102 bits (244), Expect = 3e-21
Identities = 52/79 (65%), Positives = 57/79 (72%), Gaps = 4/79 (5%)
Frame = -3
Query: 230 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGD- 54
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH GD
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGDSSSSGKAIGDE 60
Query: 53 ---KSERPEGYEPPVQESV 6
K ER EGYEPPVQESV
Sbjct: 61 TGAKVERAEGYEPPVQESV 79
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 89.8 bits (213), Expect = 1e-17
Identities = 43/85 (50%), Positives = 60/85 (70%)
Frame = -3
Query: 260 RHNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXX 81
+ ++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+L++P+ ++ KL ELH
Sbjct: 159 QRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDLGKLPELHALG 218
Query: 80 XXXXXXXGDKSERPEGYEPPVQESV 6
KS+R YEPPVQESV
Sbjct: 219 LHGSHR---KSDR---YEPPVQESV 237
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 86.6 bits (205), Expect = 1e-16
Identities = 55/124 (44%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Frame = -3
Query: 371 CIGFTNKDSLSQRKTCYGPAHSGQSNQ-KENV*NHYTRRHNS-ELREVVNKLIPDSIAKD 198
CI FT K +KTCY A S Q Q + + T S +L+E+V K IP+SI ++
Sbjct: 534 CIAFTKKRVNQNKKTCY--AQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGRE 591
Query: 197 IEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGDKSERPEGYEPPV 18
IEKA IYPL++V IRKVK+LK P+F++ KLME+H G K ERP + PV
Sbjct: 592 IEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVH---GDYSEDVGTKLERPA--DEPV 646
Query: 17 QESV 6
E V
Sbjct: 647 AEGV 650
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 69.3 bits (162), Expect = 2e-11
Identities = 34/81 (41%), Positives = 50/81 (61%)
Frame = -3
Query: 248 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXX 69
+L+ VV KLIPDSI +D I+PL +RKVKVLK+P+ ++ +++ELH
Sbjct: 105 DLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKPKLDLGRILELH--SEGKA 162
Query: 68 XXXGDKSERPEGYEPPVQESV 6
G+ RP+ YEPPV ++V
Sbjct: 163 DEFGEGVPRPDHYEPPVVDAV 183
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 67.7 bits (158), Expect = 7e-11
Identities = 29/52 (55%), Positives = 43/52 (82%)
Frame = -3
Query: 245 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 90
L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+P+F++ L+ LH
Sbjct: 181 LQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFDLGGLLALH 232
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 62.1 bits (144), Expect = 3e-09
Identities = 32/57 (56%), Positives = 39/57 (68%), Gaps = 4/57 (7%)
Frame = -3
Query: 164 RDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGD----KSERPEGYEPPVQESV 6
R +C++KVK+LK+P+FE+ KLMELH GD K ER EGYEPPVQESV
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHGDSSSSGKAIGDETGAKVERAEGYEPPVQESV 119
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 55.6 bits (128), Expect = 3e-07
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = -3
Query: 377 VXCIGFTNKDSL---SQRKTCYGPAHSGQSNQKENV*NHYTRRHNSEL--REVVNKLIPD 213
V + FT K S S TCY A S Q N + ++L E LI +
Sbjct: 140 VFTLAFTKKTSAGKQSSTSTCY--AKSSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGE 197
Query: 212 SIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 90
K IEK I+PL+++ IRKVKVLKRP+ + +K+ EL+
Sbjct: 198 DYTKKIEKETKNIFPLQNITIRKVKVLKRPKLDATKIAELY 238
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 53.6 bits (123), Expect = 1e-06
Identities = 29/96 (30%), Positives = 50/96 (52%)
Frame = -3
Query: 377 VXCIGFTNKDSLSQRKTCYGPAHSGQSNQKENV*NHYTRRHNSELREVVNKLIPDSIAKD 198
+ I FT QRKT Y + +K+ V + +++ +S+AK+
Sbjct: 136 IFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAKE 195
Query: 197 IEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 90
I KA I+PL+++ +RKVK++KRP+ + KL E +
Sbjct: 196 IGKATRTIFPLQNITLRKVKLVKRPKVDAQKLREFY 231
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 45.2 bits (102), Expect = 4e-04
Identities = 23/93 (24%), Positives = 46/93 (49%)
Frame = -3
Query: 368 IGFTNKDSLSQRKTCYGPAHSGQSNQKENV*NHYTRRHNSELREVVNKLIPDSIAKDIEK 189
+ FT + Q + CY + + R +++E V+ L + ++ + +
Sbjct: 143 VAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVR 202
Query: 188 ACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 90
C+ I PLR++ IRKV+V++ P+F+ L+ H
Sbjct: 203 RCNPILPLRELRIRKVRVVRTPKFDAQALLSAH 235
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 41.5 bits (93), Expect = 0.005
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = -3
Query: 377 VXCIGFTNKDSLSQRKTCYGPAHSGQSNQKENV*NHYTRRHNS-ELREVVNKLIPDSIAK 201
V +G T + +KTCY HS + ++ + + + ++++++ KL +++ K
Sbjct: 89 VFVMGVTRRHPGYVKKTCY-VKHSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGK 147
Query: 200 DIEKACHGIYPLRDVCIRKVKVLK 129
IE+ I+PL++ C+RKVK +K
Sbjct: 148 RIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 40.7 bits (91), Expect = 0.009
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 14/110 (12%)
Frame = -3
Query: 377 VXCIGFTNKDSLSQRKTCYGPAHSGQSNQKENV*NHYTRRHNSELREVVNKLIPDSI--- 207
V I FT K ++KT Y ++ +K+ V +++L+ VV+ LI S+
Sbjct: 136 VFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSLNGV 195
Query: 206 -----------AKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 90
A+ I I+P+ +V IRKVKVLK P+ + +KL EL+
Sbjct: 196 TTNASGFAPTLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKLSELY 245
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 37.5 bits (83), Expect = 0.082
Identities = 26/96 (27%), Positives = 42/96 (43%)
Frame = -3
Query: 377 VXCIGFTNKDSLSQRKTCYGPAHSGQSNQKENV*NHYTRRHNSELREVVNKLIPDSIAKD 198
V I FT++ +RK C+ + + + + +V KL +
Sbjct: 137 VFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAK 196
Query: 197 IEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 90
+ +A I RDV IR+VKV+KRPR + L +H
Sbjct: 197 LTEALQKITMCRDVMIRRVKVVKRPRNTMELLSTMH 232
>UniRef50_A7QEJ3 Cluster: Chromosome chr17 scaffold_85, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_85, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 185
Score = 37.1 bits (82), Expect = 0.11
Identities = 22/81 (27%), Positives = 35/81 (43%)
Frame = +2
Query: 128 SSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSPPP*VQSCDVACNDFTHFLSDCSDL 307
SS +S + CK + C R + + + + TCS P C +S +DL
Sbjct: 9 SSAISSY-CKTSSVAMCQNRQTLRVFYMASKKTCSIQPSCSVCSNILPKHVCVVSKTNDL 67
Query: 308 SVLGRSTSCVGSRSPYW*NQC 370
GR+ SC+GS+ + C
Sbjct: 68 KENGRTASCLGSQGDHGDRDC 88
>UniRef50_UPI00006CF2E6 Cluster: hypothetical protein
TTHERM_00059510; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00059510 - Tetrahymena
thermophila SB210
Length = 1882
Score = 35.1 bits (77), Expect = 0.44
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 170 GRCHGRPSRCPWQWSQESTCSPPP*VQSCDVACNDFT--HFLSDCSDLSVLGRSTSCVGS 343
G+C+ + CP + +ST PP V SC C+D T + S C+ + L S CV
Sbjct: 739 GKCY---NPCPLGYYGDSTSIPPKCV-SCQSICSDCTAQNNCSSCNGGATLNNSNQCVCP 794
Query: 344 RSPYW 358
YW
Sbjct: 795 VQQYW 799
>UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2;
cellular organisms|Rep: Surface repeat protein, putative
- Roseobacter sp. AzwK-3b
Length = 5954
Score = 34.3 bits (75), Expect = 0.76
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 33 ALRPFRLVSGFPLASTAFAVKFHQLR-DLETGPLQHFHLSDANIAQRVDAMAGLLDVLGN 209
AL RL + P+ V QL D+ TGP+ H + D Q V A GL+D+ GN
Sbjct: 5486 ALSVLRLGALVPVGPDGLGVALDQLDLDVTTGPV-HLNERDGIDLQSVIARDGLIDIFGN 5544
Query: 210 GV 215
G+
Sbjct: 5545 GL 5546
>UniRef50_A2DGN8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 640
Score = 33.9 bits (74), Expect = 1.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 275 NHYTRRHNSELREVVNKLIPDSIA 204
NH+ R+H S ++ +NK PDSIA
Sbjct: 122 NHFNRQHQSRVQNFINKYFPDSIA 145
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 32.7 bits (71), Expect = 2.3
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = -3
Query: 254 NSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 129
N ++++ ++++ I + IE C I+P+ V IRK+KV++
Sbjct: 174 NMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 363
Score = 32.7 bits (71), Expect = 2.3
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -3
Query: 248 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 96
EL V + +P + AK + CH Y L D ++ +K RFE L+E
Sbjct: 60 ELLWEVTRHLPPASAKMLAYTCHKFYHLSDTWLKNIKFFPVERFETLCLLE 110
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 32.7 bits (71), Expect = 2.3
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = -3
Query: 239 EVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 99
E V +I D +++ K IYP+R + IRK +VL P +I +L+
Sbjct: 160 EYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEEKIVELV 206
>UniRef50_UPI000155EEEB Cluster: PREDICTED: similar to leukocyte
immunoglobulin-like receptor; n=2; Laurasiatheria|Rep:
PREDICTED: similar to leukocyte immunoglobulin-like
receptor - Equus caballus
Length = 618
Score = 32.3 bits (70), Expect = 3.1
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +2
Query: 98 PSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 223
P R A + P H RC+G PS P+ WSQ S
Sbjct: 175 PRIHHGRWQALFPVGPVNTSHGGTYRCYGSPSSYPYAWSQPS 216
>UniRef50_UPI0000E24B4A Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 446
Score = 31.9 bits (69), Expect = 4.1
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 98 PSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPW 205
PSTS S G + + G RA G C GR R W
Sbjct: 369 PSTSDSVCGRAEPAASLGAAQRAPGGCSGRRQRATW 404
>UniRef50_Q1L966 Cluster: Novel protein similar to vertebrate ataxin
1; n=1; Danio rerio|Rep: Novel protein similar to
vertebrate ataxin 1 - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 781
Score = 31.9 bits (69), Expect = 4.1
Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 101 STSRSRNGASSTLSPFGCKHRAEGRCHGRP-SRCPWQWSQESTCSPPP*VQS 253
STS GAS L P H G C G+P SR S S PPP V +
Sbjct: 331 STSADSGGASDKLPPSTSHHEKGGICAGKPVSRSSSLSSSLSFALPPPPVDN 382
>UniRef50_Q23YT2 Cluster: Kinesin motor domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Kinesin motor
domain containing protein - Tetrahymena thermophila SB210
Length = 1736
Score = 31.9 bits (69), Expect = 4.1
Identities = 19/90 (21%), Positives = 40/90 (44%)
Frame = -3
Query: 275 NHYTRRHNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 96
N + ++++ NK+ S ++DI+ H + +D+ I+ L+ P+++I +
Sbjct: 1198 NQSKQNQQDQVQQNTNKVDKSSSSQDIKLPQHSLTKKQDISIKNQIALRLPKYKI--WIG 1255
Query: 95 LHXXXXXXXXXXGDKSERPEGYEPPVQESV 6
DKSE E Y+ + E +
Sbjct: 1256 CSYLQDQISSFKTDKSEMAENYKKQIDELI 1285
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 31.9 bits (69), Expect = 4.1
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -3
Query: 251 SELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 120
S+ +V I I D+ IYPLR V I K+KVL+ PR
Sbjct: 157 SDFDSLVRDSIMGKIQVDLFNVAKKIYPLRKVEIIKIKVLEYPR 200
>UniRef50_Q2UC38 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 657
Score = 31.5 bits (68), Expect = 5.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 60 GFPLASTAFAVKFHQLRDLETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQL 227
GFP + A +R LET P H +S +AQR++A+ L + G+ + +
Sbjct: 27 GFPTCANCNAANEPCIR-LETSPSWHHAMSKGALAQRIEALEAHLSAITEGLPSNI 81
>UniRef50_UPI00006CFE90 Cluster: hypothetical protein TTHERM_00691950;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00691950 - Tetrahymena thermophila SB210
Length = 1510
Score = 31.1 bits (67), Expect = 7.1
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3
Query: 359 TNKDSLSQRKTCYGPAHSGQSNQKENV*NH--YTRRHNSELREVVNKLIPDSIAKD 198
+N D LSQ++ Y PA+ +S++ + + YT R NS+ + KL ++ ++
Sbjct: 1034 SNPDFLSQQQNAYQPANEDRSDEDDYFEDQPDYTNRDNSDEKPAAGKLNEKTLKRE 1089
>UniRef50_Q313Z4 Cluster: Putative uncharacterized protein; n=1;
Desulfovibrio desulfuricans G20|Rep: Putative
uncharacterized protein - Desulfovibrio desulfuricans
(strain G20)
Length = 121
Score = 31.1 bits (67), Expect = 7.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 95 VPSTSRSRNGASSTLSPFGCKHRAEGRCHGR-PSRCPWQWSQE 220
V + ++ ST P G HRA G H R P RCP + +E
Sbjct: 42 VQAVVHAKREVGSTFEPMGDPHRAVGPDHHRAPDRCPGKQLEE 84
>UniRef50_Q1Q4N9 Cluster: Similar to glycosyltransferase family 2;
n=1; Candidatus Kuenenia stuttgartiensis|Rep: Similar to
glycosyltransferase family 2 - Candidatus Kuenenia
stuttgartiensis
Length = 318
Score = 31.1 bits (67), Expect = 7.1
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -2
Query: 180 WHLPSARCLHPKGESVEEAPFR 115
WH+P AR +H GES +AP++
Sbjct: 212 WHVPDARVIHLGGESKRKAPWQ 233
>UniRef50_A3VR62 Cluster: Putative uncharacterized protein; n=1;
Parvularcula bermudensis HTCC2503|Rep: Putative
uncharacterized protein - Parvularcula bermudensis
HTCC2503
Length = 269
Score = 31.1 bits (67), Expect = 7.1
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +3
Query: 105 LRDLETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVHHLPEFRVVTSRVMISHI 284
L DL+ L H H+ A A+R+ + G VLG G + L+ P+ TS +H+
Sbjct: 90 LEDLDAIILTHAHIDHAGGAKRLHKLTGAPIVLGAGDEDLLMTAKPDDLCPTS--PFAHL 147
Query: 285 FFLIALT*VCWAVA 326
+ T W+VA
Sbjct: 148 VRVTVTTKEDWSVA 161
>UniRef50_Q9VX38 Cluster: CG8326-PA; n=3; Sophophora|Rep: CG8326-PA
- Drosophila melanogaster (Fruit fly)
Length = 332
Score = 31.1 bits (67), Expect = 7.1
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = -3
Query: 317 PAHSGQSNQKENV*NHYTRRHNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVK 138
P S S + N+ LR V N++ S+ + +A +G+ +R+ ++
Sbjct: 84 PGSSSSSKETRNIKQFANETDEDYLRRV-NRMTNASVREAHYEAKYGVNVIRNPKTGEIT 142
Query: 137 VLKRPRFEISKLME 96
V KRP+ EI +L++
Sbjct: 143 VQKRPKNEIDELLK 156
>UniRef50_Q4PIM6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 554
Score = 31.1 bits (67), Expect = 7.1
Identities = 21/53 (39%), Positives = 24/53 (45%)
Frame = -2
Query: 270 LHATSQL*TQGGGEQVDS*LHCQGHREGLPWHLPSARCLHPKGESVEEAPFRD 112
LHATS T G V+ L G R PWH C H K +E+AP D
Sbjct: 43 LHATSSKCTHYGAPLVNGVLTGDG-RIICPWH---GACFHAKDGEIEDAPALD 91
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 31.1 bits (67), Expect = 7.1
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -3
Query: 215 DSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 123
+SI + I++A IYP+R IRK +VL+ P
Sbjct: 161 ESIPEQIKEAGRKIYPIRQAEIRKTEVLEEP 191
>UniRef50_UPI000034E948 Cluster: UPI000034E948 related cluster; n=3;
Bos taurus|Rep: UPI000034E948 UniRef100 entry - unknown
Length = 457
Score = 30.7 bits (66), Expect = 9.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 143 PFGCKHRAEGRCHGRPSRCPWQWSQES 223
P H RC+G PS P+ WSQ S
Sbjct: 190 PVNTSHGGTYRCYGSPSSYPYVWSQPS 216
>UniRef50_Q21DT8 Cluster: ABC-1; n=1; Saccharophagus degradans
2-40|Rep: ABC-1 - Saccharophagus degradans (strain 2-40
/ ATCC 43961 / DSM 17024)
Length = 480
Score = 30.7 bits (66), Expect = 9.4
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -3
Query: 251 SELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 141
S+L + L+P+ I K++ K+C+ + P+ IRK+
Sbjct: 91 SQLLSLEADLLPEGIRKELAKSCYQVPPINRALIRKM 127
>UniRef50_Q1J3G2 Cluster: Integrase, catalytic region; n=1;
Deinococcus geothermalis DSM 11300|Rep: Integrase,
catalytic region - Deinococcus geothermalis (strain DSM
11300)
Length = 424
Score = 30.7 bits (66), Expect = 9.4
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 107 SRSRNGASSTLSPFGCKHRAEGRCHGRPSRC-PWQWSQESTCSPP 238
+R+R+G + + G + G GRPSRC P W + PP
Sbjct: 307 NRARSGGTGSCRMAGTSTGSPGGTPGRPSRCRPTTWKCRCSAVPP 351
>UniRef50_Q6L9N8 Cluster: Uromodulin-like 1 protein variant 2; n=1;
Homo sapiens|Rep: Uromodulin-like 1 protein variant 2 -
Homo sapiens (Human)
Length = 112
Score = 30.7 bits (66), Expect = 9.4
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Frame = +2
Query: 149 GCKHRAEGRCHGRP-SRCPW-QWSQES-TC-----SPPP*VQSCDVACN 271
GC H G C GRP S P QW S TC +PPP + C AC+
Sbjct: 43 GCLHPPCGSCSGRPRSPAPCNQWPPPSTTCTQPLGTPPPQCRGCYWACH 91
>UniRef50_Q4WAY8 Cluster: C6 finger transcription factor, putative;
n=2; Trichocomaceae|Rep: C6 finger transcription factor,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 622
Score = 30.7 bits (66), Expect = 9.4
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 98 PSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTC 229
PS + G + + G HRA RCHG+ RC + + TC
Sbjct: 71 PSHPIANRGMNMLVHDLGFSHRACDRCHGQKLRCRRE-NNSDTC 113
>UniRef50_Q4P582 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 606
Score = 30.7 bits (66), Expect = 9.4
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 98 PSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQ 208
P+T R S + P CKHR+ + P PW+
Sbjct: 257 PATDEPRLNGSHSPPPKSCKHRSSSKSASGPDDIPWR 293
>UniRef50_Q0CZ74 Cluster: 2-C-methyl-D-erythritol
2,4-cyclodiphosphate synthase; n=2; Aspergillus|Rep:
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
Aspergillus terreus (strain NIH 2624)
Length = 933
Score = 30.7 bits (66), Expect = 9.4
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 VDAMAGLLDVLG-NGVRNQLVHHLPEFRVVTSRVMISHIFFLIAL 302
VD G+LDV NG+ ++LV+ EF + M+ HIF + +L
Sbjct: 797 VDMSNGMLDVCRRNGLYSELVYDRMEFFLARQTEMVDHIFCVSSL 841
>UniRef50_A2QIG4 Cluster: Putative uncharacterized protein; n=1;
Aspergillus niger|Rep: Putative uncharacterized protein
- Aspergillus niger
Length = 443
Score = 30.7 bits (66), Expect = 9.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 195 REGLPWHLPSARCLHPKGESVEEAP 121
R GLP HLP RCL P+ +V P
Sbjct: 168 RTGLPAHLPKTRCLSPRVAAVPIPP 192
>UniRef50_Q8BJM3 Cluster: Growth inhibition and
differentiation-related protein 88 homolog; n=10;
Eutheria|Rep: Growth inhibition and
differentiation-related protein 88 homolog - Mus
musculus (Mouse)
Length = 775
Score = 30.7 bits (66), Expect = 9.4
Identities = 21/103 (20%), Positives = 33/103 (32%)
Frame = +2
Query: 2 IKHSLEREARSPPAVQTXXXXXXXXXXXXXEVPSTSRSRNGASSTLSPFGCKHRAEGRCH 181
+K S + E PPA S+ R S C+
Sbjct: 31 LKSSDQEEGHGPPAFVPKDQKEGCLPQKISASKPESQRRGAGHSDRKDVDCREGKRSASQ 90
Query: 182 GRPSRCPWQWSQESTCSPPP*VQSCDVACNDFTHFLSDCSDLS 310
R RCP + ++E CS +S + + + H D +S
Sbjct: 91 LRKDRCPQKQNKEKACSKKGAEESTEASSQEHQHRAPDAGIVS 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 348,486,829
Number of Sequences: 1657284
Number of extensions: 6553831
Number of successful extensions: 20240
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 19741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20223
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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