Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0020.Seq
(370 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006840-1|AAP35486.1| 370|Homo sapiens phosphoserine aminotran... 54 2e-07
BC018129-1|AAH18129.1| 370|Homo sapiens phosphoserine aminotran... 54 2e-07
BC004863-1|AAH04863.1| 370|Homo sapiens phosphoserine aminotran... 54 2e-07
BC000971-1|AAH00971.1| 370|Homo sapiens phosphoserine aminotran... 54 2e-07
AY131232-1|AAN71736.1| 370|Homo sapiens phosphoserine aminotran... 54 2e-07
AL353594-2|CAI16883.1| 324|Homo sapiens phosphoserine aminotran... 54 2e-07
AL353594-1|CAI16882.1| 370|Homo sapiens phosphoserine aminotran... 54 2e-07
AF113132-1|AAD42052.1| 324|Homo sapiens phosphoserine aminotran... 54 2e-07
BC016645-1|AAH16645.1| 370|Homo sapiens phosphoserine aminotran... 52 4e-07
BC101321-1|AAI01322.1| 362|Homo sapiens SLC35F4 protein protein. 29 4.7
BC101320-1|AAI01321.1| 362|Homo sapiens SLC35F4 protein protein. 29 4.7
BC101318-1|AAI01319.1| 362|Homo sapiens SLC35F4 protein protein. 29 4.7
BC037878-1|AAH37878.1| 421|Homo sapiens solute carrier family 3... 29 6.2
AL713868-1|CAI14569.1| 490|Homo sapiens solute carrier family 3... 29 6.2
AL122008-2|CAI22850.1| 421|Homo sapiens solute carrier family 3... 29 6.2
AL122008-1|CAI22849.1| 490|Homo sapiens solute carrier family 3... 29 6.2
AK095031-1|BAC04479.1| 490|Homo sapiens protein ( Homo sapiens ... 29 6.2
>BT006840-1|AAP35486.1| 370|Homo sapiens phosphoserine
aminotransferase protein.
Length = 370
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 110 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKL 250
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKI 52
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +1
Query: 262 QDVVRNLLDVPDNYKVXXXXXXXXXQFAAVPLNLI 366
+++VR LL VPDNYKV QF+AVPLNLI
Sbjct: 57 ENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLI 91
>BC018129-1|AAH18129.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 110 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKL 250
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKI 52
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +1
Query: 262 QDVVRNLLDVPDNYKVXXXXXXXXXQFAAVPLNLI 366
+++VR LL VPDNYKV QF+AVPLNLI
Sbjct: 57 ENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLI 91
>BC004863-1|AAH04863.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 110 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKL 250
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKI 52
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +1
Query: 262 QDVVRNLLDVPDNYKVXXXXXXXXXQFAAVPLNLI 366
+++VR LL VPDNYKV QF+AVPLNLI
Sbjct: 57 ENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLI 91
>BC000971-1|AAH00971.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 110 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKL 250
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKI 52
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +1
Query: 262 QDVVRNLLDVPDNYKVXXXXXXXXXQFAAVPLNLI 366
+++VR LL VPDNYKV QF+AVPLNLI
Sbjct: 57 ENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLI 91
>AY131232-1|AAN71736.1| 370|Homo sapiens phosphoserine
aminotransferase protein.
Length = 370
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 110 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKL 250
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKI 52
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +1
Query: 262 QDVVRNLLDVPDNYKVXXXXXXXXXQFAAVPLNLI 366
+++VR LL VPDNYKV QF+AVPLNLI
Sbjct: 57 ENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLI 91
>AL353594-2|CAI16883.1| 324|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 324
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 110 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKL 250
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKI 52
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +1
Query: 262 QDVVRNLLDVPDNYKVXXXXXXXXXQFAAVPLNLI 366
+++VR LL VPDNYKV QF+AVPLNLI
Sbjct: 57 ENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLI 91
>AL353594-1|CAI16882.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 110 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKL 250
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKI 52
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +1
Query: 262 QDVVRNLLDVPDNYKVXXXXXXXXXQFAAVPLNLI 366
+++VR LL VPDNYKV QF+AVPLNLI
Sbjct: 57 ENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLI 91
>AF113132-1|AAD42052.1| 324|Homo sapiens phosphoserine
aminotransferase protein.
Length = 324
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 110 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKL 250
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKI 52
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +1
Query: 262 QDVVRNLLDVPDNYKVXXXXXXXXXQFAAVPLNLI 366
+++VR LL VPDNYKV QF+AVPLNLI
Sbjct: 57 ENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLI 91
>BC016645-1|AAH16645.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +2
Query: 110 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKL 250
+V NFG GPAKLP V I+ EL +++ GIS++E SHRSS + K+
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVVEMSHRSSDFAKI 52
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +1
Query: 262 QDVVRNLLDVPDNYKVXXXXXXXXXQFAAVPLNLI 366
+++VR LL VPDNYKV QF+AVPLNLI
Sbjct: 57 ENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLI 91
>BC101321-1|AAI01322.1| 362|Homo sapiens SLC35F4 protein protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -2
Query: 150 SGNLAGPAPKLNTLDIFTYLFI*LIPTLHYFTKRHYRSQTCRSTMWLCL 4
S N A ++TL F +FI P + YFTK + S + + W CL
Sbjct: 197 SANFGEAAHFVSTLGFFNLIFISFTPVILYFTKVEHWS-SFAALPWGCL 244
>BC101320-1|AAI01321.1| 362|Homo sapiens SLC35F4 protein protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -2
Query: 150 SGNLAGPAPKLNTLDIFTYLFI*LIPTLHYFTKRHYRSQTCRSTMWLCL 4
S N A ++TL F +FI P + YFTK + S + + W CL
Sbjct: 197 SANFGEAAHFVSTLGFFNLIFISFTPVILYFTKVEHWS-SFAALPWGCL 244
>BC101318-1|AAI01319.1| 362|Homo sapiens SLC35F4 protein protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -2
Query: 150 SGNLAGPAPKLNTLDIFTYLFI*LIPTLHYFTKRHYRSQTCRSTMWLCL 4
S N A ++TL F +FI P + YFTK + S + + W CL
Sbjct: 197 SANFGEAAHFVSTLGFFNLIFISFTPVILYFTKVEHWS-SFAALPWGCL 244
>BC037878-1|AAH37878.1| 421|Homo sapiens solute carrier family 35,
member F3 protein.
Length = 421
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 120 LNTLDIFTYLFI*LIPTLHYFTKRHYRS 37
L+ L +F LFI IP + YFTK Y S
Sbjct: 268 LSILGVFNILFITCIPIILYFTKVEYWS 295
>AL713868-1|CAI14569.1| 490|Homo sapiens solute carrier family 35,
member F3 protein.
Length = 490
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 120 LNTLDIFTYLFI*LIPTLHYFTKRHYRS 37
L+ L +F LFI IP + YFTK Y S
Sbjct: 337 LSILGVFNILFITCIPIILYFTKVEYWS 364
>AL122008-2|CAI22850.1| 421|Homo sapiens solute carrier family 35,
member F3 protein.
Length = 421
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 120 LNTLDIFTYLFI*LIPTLHYFTKRHYRS 37
L+ L +F LFI IP + YFTK Y S
Sbjct: 268 LSILGVFNILFITCIPIILYFTKVEYWS 295
>AL122008-1|CAI22849.1| 490|Homo sapiens solute carrier family 35,
member F3 protein.
Length = 490
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 120 LNTLDIFTYLFI*LIPTLHYFTKRHYRS 37
L+ L +F LFI IP + YFTK Y S
Sbjct: 337 LSILGVFNILFITCIPIILYFTKVEYWS 364
>AK095031-1|BAC04479.1| 490|Homo sapiens protein ( Homo sapiens
cDNA FLJ37712 fis, clone BRHIP2018369. ).
Length = 490
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 120 LNTLDIFTYLFI*LIPTLHYFTKRHYRS 37
L+ L +F LFI IP + YFTK Y S
Sbjct: 337 LSILGVFNILFITCIPIILYFTKVEYWS 364
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,511,962
Number of Sequences: 237096
Number of extensions: 726392
Number of successful extensions: 1437
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1437
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -