Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0020.Seq
(370 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ062790-1|AAY56663.1| 364|Drosophila melanogaster unknown prot... 60 7e-10
AY119560-1|AAM50214.1| 364|Drosophila melanogaster GM02605p pro... 60 7e-10
AE014297-4350|AAF56874.1| 364|Drosophila melanogaster CG11899-P... 60 7e-10
X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of ... 28 4.4
AY069181-1|AAL39326.1| 1131|Drosophila melanogaster GH22805p pro... 28 4.4
AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA... 28 4.4
AE013599-2032|AAM68528.1| 1078|Drosophila melanogaster CG34123-P... 28 4.4
AE013599-2031|AAF58153.2| 1131|Drosophila melanogaster CG34123-P... 28 4.4
AE013599-2030|ABI31097.1| 1921|Drosophila melanogaster CG34123-P... 28 4.4
>DQ062790-1|AAY56663.1| 364|Drosophila melanogaster unknown
protein.
Length = 364
Score = 60.5 bits (140), Expect = 7e-10
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2
Query: 113 VFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLN 253
V NF AGPAKLPEEV + ++ L N SGIS++E SHRSS Y K++
Sbjct: 2 VINFAAGPAKLPEEVLKEVQENLVNCNGSGISVMEMSHRSSNYAKIH 48
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +1
Query: 223 SSFFNIHEAKCEIQDVVRNLLDVPDNYKVXXXXXXXXXQFAAVPLNLI 366
S++ IH+A I D+ R LL+VP NYK+ QFAAV LNLI
Sbjct: 42 SNYAKIHDAT--ISDL-RELLNVPSNYKILLMQGGGTGQFAAVALNLI 86
>AY119560-1|AAM50214.1| 364|Drosophila melanogaster GM02605p
protein.
Length = 364
Score = 60.5 bits (140), Expect = 7e-10
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2
Query: 113 VFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLN 253
V NF AGPAKLPEEV + ++ L N SGIS++E SHRSS Y K++
Sbjct: 2 VINFAAGPAKLPEEVLKEVQENLVNCNGSGISVMEMSHRSSNYAKIH 48
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +1
Query: 223 SSFFNIHEAKCEIQDVVRNLLDVPDNYKVXXXXXXXXXQFAAVPLNLI 366
S++ IH+A I D+ R LL+VP NYK+ QFAAV LNLI
Sbjct: 42 SNYAKIHDAT--ISDL-RELLNVPSNYKILLMQGGGTGQFAAVALNLI 86
>AE014297-4350|AAF56874.1| 364|Drosophila melanogaster CG11899-PA
protein.
Length = 364
Score = 60.5 bits (140), Expect = 7e-10
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +2
Query: 113 VFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLN 253
V NF AGPAKLPEEV + ++ L N SGIS++E SHRSS Y K++
Sbjct: 2 VINFAAGPAKLPEEVLKEVQENLVNCNGSGISVMEMSHRSSNYAKIH 48
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +1
Query: 223 SSFFNIHEAKCEIQDVVRNLLDVPDNYKVXXXXXXXXXQFAAVPLNLI 366
S++ IH+A I D+ R LL+VP NYK+ QFAAV LNLI
Sbjct: 42 SNYAKIHDAT--ISDL-RELLNVPSNYKILLMQGGGTGQFAAVALNLI 86
>X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of
variegation protein3-7 protein.
Length = 1169
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 337 DQDPHQLXTALCSCPVHLISFAQHPEFRI*LHV 239
D +P Q LC+C + + SF +H + R H+
Sbjct: 336 DTNPQQCRCTLCNCTMAITSFLRHCKTRAHCHM 368
>AY069181-1|AAL39326.1| 1131|Drosophila melanogaster GH22805p
protein.
Length = 1131
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 101 KMSKVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHR 229
K+ K A L E+YE +++ FE+ G LL+ S+R
Sbjct: 607 KLYKAMAHEAAEDDLDTEIYEELRSYAKEFESKGNKLLDFSYR 649
>AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA
protein.
Length = 1250
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 337 DQDPHQLXTALCSCPVHLISFAQHPEFRI*LHV 239
D +P Q LC+C + + SF +H + R H+
Sbjct: 417 DTNPQQCRCTLCNCTMAITSFLRHCKTRAHCHM 449
>AE013599-2032|AAM68528.1| 1078|Drosophila melanogaster CG34123-PC,
isoform C protein.
Length = 1078
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 101 KMSKVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHR 229
K+ K A L E+YE +++ FE+ G LL+ S+R
Sbjct: 607 KLYKAMAHEAAEDDLDTEIYEELRSYAKEFESKGNKLLDFSYR 649
>AE013599-2031|AAF58153.2| 1131|Drosophila melanogaster CG34123-PB,
isoform B protein.
Length = 1131
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 101 KMSKVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHR 229
K+ K A L E+YE +++ FE+ G LL+ S+R
Sbjct: 607 KLYKAMAHEAAEDDLDTEIYEELRSYAKEFESKGNKLLDFSYR 649
>AE013599-2030|ABI31097.1| 1921|Drosophila melanogaster CG34123-PD,
isoform D protein.
Length = 1921
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 101 KMSKVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHR 229
K+ K A L E+YE +++ FE+ G LL+ S+R
Sbjct: 607 KLYKAMAHEAAEDDLDTEIYEELRSYAKEFESKGNKLLDFSYR 649
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,866,335
Number of Sequences: 53049
Number of extensions: 229670
Number of successful extensions: 458
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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