Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0019.Seq
(451 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 23 1.5
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 2.0
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 2.7
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 2.7
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 2.7
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 2.7
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 2.7
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 2.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 2.7
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 3.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 3.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 3.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 4.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 4.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 4.7
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 6.2
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 6.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 6.2
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 21 8.2
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -3
Query: 290 CTTIIQFS-LNVWHVE*TCSQCSES 219
C++ +Q S +W +E +C C ES
Sbjct: 57 CSSYLQVSGSKIWQMERSCMCCQES 81
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 2.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 60 NLNYIHENRWNLNYNS 107
N NY + N +N NYN+
Sbjct: 88 NYNYSNYNNYNNNYNN 103
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 57 LNLNYIHENRWNLNYNS 107
L+ N IH N + NYN+
Sbjct: 84 LSNNTIHNNNYKYNYNN 100
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 66 NYIHENRWNLNYNS*IFFN 122
NY + N N NYN +++N
Sbjct: 97 NYNNNNYNNNNYNKKLYYN 115
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 58 KKVYIAVININKLYIP 11
KK+Y +INI ++ +P
Sbjct: 110 KKLYYNIINIEQIPVP 125
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 57 LNLNYIHENRWNLNYNS 107
L+ N IH N + NYN+
Sbjct: 84 LSNNTIHNNNYKYNYNN 100
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 66 NYIHENRWNLNYNS*IFFN 122
NY + N N NYN +++N
Sbjct: 97 NYNNNNYNNNNYNKKLYYN 115
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 58 KKVYIAVININKLYIP 11
KK+Y +INI ++ +P
Sbjct: 110 KKLYYNIINIEQIPVP 125
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 57 LNLNYIHENRWNLNYNS 107
L+ N IH N + NYN+
Sbjct: 85 LSNNTIHNNNYKYNYNN 101
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 57 LNLNYIHENRWNLNYNS 107
L+ N IH N + NYN+
Sbjct: 85 LSNNTIHNNNYKYNYNN 101
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 57 LNLNYIHENRWNLNYNS 107
L+ N IH N + NYN+
Sbjct: 85 LSNNTIHNNNYKYNYNN 101
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 57 LNLNYIHENRWNLNYNS 107
L+ N IH N + NYN+
Sbjct: 85 LSNNTIHNNNYKYNYNN 101
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 2.7
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -1
Query: 61 FKKVYIAVININKLYIP 11
+KK+Y +INI ++ +P
Sbjct: 349 YKKLYYNIINIEQIPVP 365
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 3.6
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = -3
Query: 182 DFRANFICNLISFYFICLSKIKEN---LTVV 99
D R + C L CL IKEN LTVV
Sbjct: 410 DVRPKYDCTLEKSQDDCLKAIKENNADLTVV 440
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 3.6
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = -3
Query: 182 DFRANFICNLISFYFICLSKIKEN---LTVV 99
D R + C L CL IKEN LTVV
Sbjct: 410 DVRPKYDCTLEKSQDDCLKAIKENNADLTVV 440
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 3.6
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = -3
Query: 182 DFRANFICNLISFYFICLSKIKEN---LTVV 99
D R + C L CL IKEN LTVV
Sbjct: 410 DVRPKYDCTLEKSQDDCLKAIKENNADLTVV 440
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 4.7
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Frame = -3
Query: 227 SESAVTYFGFTF*TS-----DFRANFICNLISFYFICLSKIK 117
SE+ + +F + F D NFI +L ++Y I SK+K
Sbjct: 557 SENHIEWFDYAFIPGNLKWLDIHGNFIESLGNYYKIRDSKVK 598
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 4.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 67 FKFKKVYIAVININKLYIP 11
+ KK+Y +INI ++ +P
Sbjct: 318 YNSKKLYYNIINIEQIPVP 336
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 4.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 67 FKFKKVYIAVININKLYIP 11
+ KK+Y +INI ++ +P
Sbjct: 329 YNSKKLYYNIINIEQIPVP 347
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 58 KKVYIAVININKLYIP 11
KK+Y +INI ++ +P
Sbjct: 330 KKLYYNIINIEQIPVP 345
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 58 KKVYIAVININKLYIP 11
KK+Y +INI ++ +P
Sbjct: 334 KKLYYNIINIEQIPVP 349
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 6.2
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1
Query: 58 KKVYIAVININKLYIP 11
KK+Y +INI ++ +P
Sbjct: 352 KKLYYNIINIEQIPVP 367
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 20.6 bits (41), Expect = 8.2
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -2
Query: 150 IFLFYMSFKN*RKFNCCNSNSNDFHVCN 67
IF F+MS ++ + CN+ N + N
Sbjct: 85 IFYFFMSMRSELPWGSCNNYWNTKNCVN 112
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,925
Number of Sequences: 438
Number of extensions: 1969
Number of successful extensions: 23
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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