Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0018.Seq
         (399 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   1.8  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   5.4  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   5.4  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          22   7.2  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          22   7.2  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          22   7.2  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    22   9.5  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -1

Query: 351 QDIKAEIADPGLEECGEMDVSSEDYWKCYIKSRP 250
           Q I   +  P  EE G +D+S    ++C + + P
Sbjct: 743 QKILGYLRSPDKEEDGSIDISINGLFRCLLCTHP 776


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 181 RTLSFYCPPHCPWHM 225
           R L+ YC  HCP ++
Sbjct: 70  RVLTCYCEGHCPGNL 84


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -3

Query: 142  PFIVRANTLAAGIMMAEKISDDIKNEYSL*EKCLGAFKIN 23
            PF++  N    G   A+ +   + N Y       GAF IN
Sbjct: 1105 PFVISGNGGGVGGAGAQLLHQQLSNAYRASGHINGAFVIN 1144


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 321 GLEECGEMDVSSEDYWKCYIKSRPSTYSIT 232
           G+E CG  + +     KC +  R   Y+ T
Sbjct: 269 GMEACGIHETTYNSIMKCDVDIRKDLYANT 298


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 321 GLEECGEMDVSSEDYWKCYIKSRPSTYSIT 232
           G+E CG  + +     KC +  R   Y+ T
Sbjct: 269 GMEACGIHETTYNSIMKCDVDIRKDLYANT 298


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 321 GLEECGEMDVSSEDYWKCYIKSRPSTYSIT 232
           G+E CG  + +     KC +  R   Y+ T
Sbjct: 269 GMEACGIHETTYNSIMKCDVDIRKDLYANT 298


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 275 GSVTSSPDRPPIPLLRYMCHGQCGGQ 198
           GS    P  PP   ++++  G+ GG+
Sbjct: 71  GSEAERPVTPPAQRVQFILGGEVGGE 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,388
Number of Sequences: 2352
Number of extensions: 9712
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)