BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0018.Seq
(399 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase p... 60 4e-09
AJ272267-1|CAB75961.1| 482|Homo sapiens choline dehydrogenase p... 60 4e-09
U62769-1|AAB66673.1| 1011|Homo sapiens oxytocinase splice varian... 31 1.9
U62768-1|AAB66672.1| 1025|Homo sapiens oxytocinase splice varian... 31 1.9
D50810-1|BAA09436.1| 944|Homo sapiens placental leucine aminope... 31 1.9
AJ131025-1|CAB94753.1| 1006|Homo sapiens oxytocinase/insulin-res... 31 1.9
AJ131023-1|CAB61646.1| 1025|Homo sapiens oxytocinase/insulin-res... 31 1.9
AB208883-1|BAD92120.1| 627|Homo sapiens leucyl/cystinyl aminope... 31 1.9
D50406-1|BAA34060.1| 971|Homo sapiens ST15 protein. 30 2.5
AL158830-3|CAD13384.2| 971|Homo sapiens reversion-inducing-cyst... 30 2.5
AL138834-5|CAH70155.1| 971|Homo sapiens reversion-inducing-cyst... 30 2.5
>BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase
protein.
Length = 594
Score = 59.7 bits (138), Expect = 4e-09
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Frame = -3
Query: 241 FHYSGTCAMG------SVVDSKMKVYGIDNLRVVDVSTMPFIVRANTLAAGIMMAEKISD 80
+H S TC MG +VVD + +V G++NLRVVD S MP +V N A IM+AEK +D
Sbjct: 510 YHPSCTCKMGQPSDPTAVVDPQTRVLGVENLRVVDASIMPSMVSGNLNAPTIMIAEKAAD 569
Query: 79 DIKNEYSL*EKCLGAFK 29
IK + +L +K + +K
Sbjct: 570 IIKGQPALWDKDVPVYK 586
>AJ272267-1|CAB75961.1| 482|Homo sapiens choline dehydrogenase
protein.
Length = 482
Score = 59.7 bits (138), Expect = 4e-09
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Frame = -3
Query: 241 FHYSGTCAMG------SVVDSKMKVYGIDNLRVVDVSTMPFIVRANTLAAGIMMAEKISD 80
+H S TC MG +VVD + +V G++NLRVVD S MP +V N A IM+AEK +D
Sbjct: 398 YHPSCTCKMGQPSDPTAVVDPQTRVLGVENLRVVDASIMPSMVSGNLNAPTIMIAEKAAD 457
Query: 79 DIKNEYSL*EKCLGAFK 29
IK + +L +K + +K
Sbjct: 458 IIKGQPALWDKDVPVYK 474
>U62769-1|AAB66673.1| 1011|Homo sapiens oxytocinase splice variant 2
protein.
Length = 1011
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 41 KTFLSKGIFIFNVVTYLFRHHYASRQGIGSDD 136
KT+LS+ +F VV YL H YAS I SDD
Sbjct: 546 KTYLSEDVFQHAVVLYLHNHSYAS---IQSDD 574
>U62768-1|AAB66672.1| 1025|Homo sapiens oxytocinase splice variant 1
protein.
Length = 1025
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 41 KTFLSKGIFIFNVVTYLFRHHYASRQGIGSDD 136
KT+LS+ +F VV YL H YAS I SDD
Sbjct: 560 KTYLSEDVFQHAVVLYLHNHSYAS---IQSDD 588
>D50810-1|BAA09436.1| 944|Homo sapiens placental leucine
aminopeptidase protein.
Length = 944
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 41 KTFLSKGIFIFNVVTYLFRHHYASRQGIGSDD 136
KT+LS+ +F VV YL H YAS I SDD
Sbjct: 479 KTYLSEDVFQHAVVLYLHNHSYAS---IQSDD 507
>AJ131025-1|CAB94753.1| 1006|Homo sapiens
oxytocinase/insulin-responsive aminopeptidase, putative
variant 2 protein.
Length = 1006
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 41 KTFLSKGIFIFNVVTYLFRHHYASRQGIGSDD 136
KT+LS+ +F VV YL H YAS I SDD
Sbjct: 541 KTYLSEDVFQHAVVLYLHNHSYAS---IQSDD 569
>AJ131023-1|CAB61646.1| 1025|Homo sapiens
oxytocinase/insulin-responsive aminopeptidase, variant 1
protein.
Length = 1025
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 41 KTFLSKGIFIFNVVTYLFRHHYASRQGIGSDD 136
KT+LS+ +F VV YL H YAS I SDD
Sbjct: 560 KTYLSEDVFQHAVVLYLHNHSYAS---IQSDD 588
>AB208883-1|BAD92120.1| 627|Homo sapiens leucyl/cystinyl
aminopeptidase variant protein.
Length = 627
Score = 30.7 bits (66), Expect = 1.9
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 41 KTFLSKGIFIFNVVTYLFRHHYASRQGIGSDD 136
KT+LS+ +F VV YL H YAS I SDD
Sbjct: 162 KTYLSEDVFQHAVVLYLHNHSYAS---IQSDD 190
>D50406-1|BAA34060.1| 971|Homo sapiens ST15 protein.
Length = 971
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 336 EIADPGLEECGEMDVSSEDYWKCYIKSRPSTYSITPVHVP 217
EI D +E C + + W+C+++S S + VH P
Sbjct: 241 EIVDGLIEGCKTQPLPQDPLWQCFLESSQSVHPGVTVHPP 280
>AL158830-3|CAD13384.2| 971|Homo sapiens
reversion-inducing-cysteine-rich protein with kazal
motifs protein.
Length = 971
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 336 EIADPGLEECGEMDVSSEDYWKCYIKSRPSTYSITPVHVP 217
EI D +E C + + W+C+++S S + VH P
Sbjct: 241 EIVDGLIEGCKTQPLPQDPLWQCFLESSQSVHPGVTVHPP 280
>AL138834-5|CAH70155.1| 971|Homo sapiens
reversion-inducing-cysteine-rich protein with kazal
motifs protein.
Length = 971
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 336 EIADPGLEECGEMDVSSEDYWKCYIKSRPSTYSITPVHVP 217
EI D +E C + + W+C+++S S + VH P
Sbjct: 241 EIVDGLIEGCKTQPLPQDPLWQCFLESSQSVHPGVTVHPP 280
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,073,633
Number of Sequences: 237096
Number of extensions: 1466505
Number of successful extensions: 2809
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2809
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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