Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0015.Seq
(449 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu... 86 4e-16
UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein F2... 48 1e-04
UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclea... 42 0.005
UniRef50_Q2GY91 Cluster: Putative uncharacterized protein; n=1; ... 35 0.71
UniRef50_Q7Q4L2 Cluster: ENSANGP00000006538; n=1; Anopheles gamb... 33 2.9
UniRef50_UPI0000E821B3 Cluster: PREDICTED: similar to Flag; n=1;... 32 5.0
UniRef50_Q1IUB1 Cluster: Major facilitator superfamily (MFS) tra... 32 5.0
UniRef50_A6NQM5 Cluster: Putative uncharacterized protein; n=1; ... 32 5.0
UniRef50_Q2LZ90 Cluster: GA19836-PA; n=1; Drosophila pseudoobscu... 32 5.0
UniRef50_Q9FXJ8 Cluster: F5A9.21; n=8; core eudicotyledons|Rep: ... 32 6.6
UniRef50_A7QS06 Cluster: Chromosome undetermined scaffold_155, w... 32 6.6
UniRef50_A0NF55 Cluster: ENSANGP00000031561; n=1; Anopheles gamb... 27 7.7
UniRef50_Q3D3M0 Cluster: Reticulocyte binding protein; n=5; Stre... 31 8.8
>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
nubilalis|Rep: Reverse transcriptase - Ostrinia
nubilalis (European corn borer)
Length = 497
Score = 85.8 bits (203), Expect = 4e-16
Identities = 46/107 (42%), Positives = 60/107 (56%)
Frame = -3
Query: 438 TQRAMERSMLSIRLSDRIRNWEIRRKTKVPDIITRIENX*MELDRTYATLQNKQVEXTGY 259
TQRAMER+ML + L DRIRN EIRR+T+V DI RI + A + +
Sbjct: 383 TQRAMERAMLGVSLRDRIRNEEIRRRTRVTDIARRIAKIKWQWAGHIARRADGRWGRKVL 442
Query: 258 FRYPRGDTRRQGRPKTRWSDDIRLTLGPYWTRVAEDRAQWRELEEAY 118
PR R GRP TRW+DD+ G W + A+DR+ W+ L EA+
Sbjct: 443 EWRPRAGRRSVGRPPTRWTDDLVKVAGSTWMQAAQDRSLWKSLGEAF 489
>UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein
F28E10.3 [imported] - Caenorhabditis elegans; n=4;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
protein F28E10.3 [imported] - Caenorhabditis elegans -
Strongylocentrotus purpuratus
Length = 824
Score = 47.6 bits (108), Expect = 1e-04
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = -3
Query: 447 LANTQRAMERSMLSIRLSDRIRNWEIRRKTKVPDIITRIENX*MELDRTYATLQNKQVEX 268
LA +Q MERS+LSI DR N IR +TKV DI+ + + + +
Sbjct: 319 LAASQHNMERSILSITYKDRKTNKWIREQTKVQDILEAEKRRKWNWAGHISRRNDNRWSS 378
Query: 267 TGYFRYPRGDTRRQGRPKTRWSDDIRLTLG-PYWTRVAEDRAQWRELEEAY 118
P R +GR + RW D+++ G W + A +R W EA+
Sbjct: 379 AITHWTPYEGKRNRGRQRKRWRDELQQFWGQTNWHQQALNRGIWNHHAEAF 429
>UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase, partial; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 787
Score = 42.3 bits (95), Expect = 0.005
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = -3
Query: 420 RSMLSIRLSDRIRNWEIRRKTKVPD-IITRIENX*MELDRTYATLQNKQVEXTGYFRYPR 244
R++L + L D+IRN EIR++ +P I I ++ + + ++ F+
Sbjct: 412 RTILGVHLMDKIRNEEIRQRLNIPSTICEEITKRCLKWFGHVLRMPHHRLPYQA-FQNDF 470
Query: 243 GDTRRQGRPKTRWSDDIRLTLGPYWTRVAEDRAQWR 136
R +GRP RW D ++ +G T+ AE RAQ R
Sbjct: 471 NGRRPRGRPPKRWKDQVQYDVG-LSTQEAEQRAQDR 505
>UniRef50_Q2GY91 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 655
Score = 35.1 bits (77), Expect = 0.71
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -3
Query: 237 TRRQGRPKTRWSDDIRLTLGPYWTRVAEDRAQWRELEEAYATRHAE 100
T Q K R + + +G YW R E+ AQWR E A AE
Sbjct: 288 TMLQSPTKLRRHQENQAAMGRYWLRTEEEEAQWRAEAERRAVEEAE 333
>UniRef50_Q7Q4L2 Cluster: ENSANGP00000006538; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000006538 - Anopheles gambiae
str. PEST
Length = 2321
Score = 33.1 bits (72), Expect = 2.9
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 253 PKVTCXLHLFVLQRSICPVQLHLXIFYTSYYIRYFCLPSYFPISNSVTKSDTQHASFH 426
PK T HL L R +CP+ H +F + R S + ++NS+ + +H H
Sbjct: 1826 PKATATHHLDALSRELCPMLKHFVVFSSVSCGRGNAGQSNYGMANSIMERIIEHRVVH 1883
>UniRef50_UPI0000E821B3 Cluster: PREDICTED: similar to Flag; n=1;
Gallus gallus|Rep: PREDICTED: similar to Flag - Gallus
gallus
Length = 89
Score = 32.3 bits (70), Expect = 5.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 179 DHTGPELLRTEPNGESWRRPMPRGTPN 99
D GP+ +PNG +WR PM RG PN
Sbjct: 58 DTMGPQWYVEDPNG-TWRTPMGRGDPN 83
>UniRef50_Q1IUB1 Cluster: Major facilitator superfamily (MFS)
transporter; n=1; Acidobacteria bacterium Ellin345|Rep:
Major facilitator superfamily (MFS) transporter -
Acidobacteria bacterium (strain Ellin345)
Length = 391
Score = 32.3 bits (70), Expect = 5.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 226 LSSGVPSWIPKVTCXLHLFVLQRSICPVQLHLXIFYTSYYIRYFCLPS 369
+ +GV W+P +H F ++RS L F+T++ I FC P+
Sbjct: 212 IENGVAGWLPTFATRVHRFTVERS----ALLQDTFWTTFLIGRFCAPA 255
>UniRef50_A6NQM5 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 753
Score = 32.3 bits (70), Expect = 5.0
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Frame = -3
Query: 402 RLSDRIRNWEIRRKTKVPDIITRIENX*MELDRTYATLQNKQVEXTGYFRYPRGDTRRQG 223
++ D ++ W RRK I R+E+ LD T A Q++ D RR
Sbjct: 171 QVEDTLKEWLRRRKYNKSGQIPRLESELTVLDDTLAR-QDQAARQA-------EDARRDL 222
Query: 222 RPKTRWSDDIRLTLGPYWTRV-AEDRAQWRELEEAYATRHAEL 97
T W D ++ L + +R E R W E A AE+
Sbjct: 223 EQLTHWRDSLKNALATWQSRENRERRRMWEEAAAALEKARAEV 265
>UniRef50_Q2LZ90 Cluster: GA19836-PA; n=1; Drosophila
pseudoobscura|Rep: GA19836-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 786
Score = 32.3 bits (70), Expect = 5.0
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +1
Query: 355 FCLPSYFPISNSVTKSDTQHASFHCSLRIS 444
FC PS+ I +S+T +++ +SFHCS+ ++
Sbjct: 299 FCNPSHKLIGDSMTTTESMTSSFHCSVLVA 328
>UniRef50_Q9FXJ8 Cluster: F5A9.21; n=8; core eudicotyledons|Rep:
F5A9.21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1705
Score = 31.9 bits (69), Expect = 6.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -2
Query: 190 PNPRTILDQSC*GPSPMERAGGGLCHEARRTPRYTIRNNKQKXKNVNFMV 41
P P I+ S +ER GG H R +PR+ R ++ +N++ V
Sbjct: 1487 PLPPNIIPHSMAAKEDLERRAGGARHSQRLSPRHEEREKRRSEENLSVSV 1536
>UniRef50_A7QS06 Cluster: Chromosome undetermined scaffold_155,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_155, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 972
Score = 31.9 bits (69), Expect = 6.6
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = -3
Query: 405 IRLSDRIRNWEIRRKTKVPDIITRIEN-X*MELDRTYATLQNKQVEXTGYFRYPRGDTRR 229
I +S + WE +R + + ITRI N L R NK V Y P G+
Sbjct: 721 ITVSVKKIEWEAKRMKVMSEFITRIGNARHKNLIRLLGFCYNKHVAYLLYDYLPNGNLAE 780
Query: 228 QGRPKTRWSDDIRLTLG 178
+ R K W+ ++ +G
Sbjct: 781 KIRMKRDWTAKYKIVIG 797
>UniRef50_A0NF55 Cluster: ENSANGP00000031561; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000031561 - Anopheles gambiae
str. PEST
Length = 250
Score = 27.5 bits (58), Expect(2) = 7.7
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = -3
Query: 438 TQRAMERSMLSIRLSDRIRNWEIRRKTKVPDIITRIENX*MELDRTYATLQNKQVEXT 265
++RA ERS S S+RI E +RK K + TR N + L +T L+ K + T
Sbjct: 47 SERASERSRKSNSFSERIERKEEKRK-KARN--TRTNNRTLTLPKTLEPLKQKPQKRT 101
Score = 23.0 bits (47), Expect(2) = 7.7
Identities = 13/67 (19%), Positives = 27/67 (40%)
Frame = -3
Query: 291 LQNKQVEXTGYFRYPRGDTRRQGRPKTRWSDDIRLTLGPYWTRVAEDRAQWRELEEAYAT 112
++ K+ E + T+R+ RP+ + + P R R QW+ E++
Sbjct: 138 VEEKRAEIETLLQRDGAKTKRKHRPEKKGQSLRKRKTSPRAIRSGACRTQWKGKRESWKQ 197
Query: 111 RHAELRD 91
+ + D
Sbjct: 198 QRKKNED 204
>UniRef50_Q3D3M0 Cluster: Reticulocyte binding protein; n=5;
Streptococcus agalactiae H36B|Rep: Reticulocyte binding
protein - Streptococcus agalactiae H36B
Length = 1128
Score = 31.5 bits (68), Expect = 8.8
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = -3
Query: 315 ELDRTYATLQNKQVEXTGYFRYPRGDTRRQGRPKTRWSDDIRLTLGPYWTRVAEDRAQWR 136
E+ R T+ N ++ + T+ SDD LT+G + V + +A W
Sbjct: 605 EITRVNNTIDNLKIGTVNLLSGTKNWTKNWFNRNNWQSDDDNLTIGNFSLTVLKRKAMWS 664
Query: 135 ELEEAYATRHAE 100
+ + YA + E
Sbjct: 665 GISQLYAVKSGE 676
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,192,815
Number of Sequences: 1657284
Number of extensions: 9642037
Number of successful extensions: 25740
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 25003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25729
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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