Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0015.Seq
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   1.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   1.8  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   2.3  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   5.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    20   9.4  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 26  LFPNYNHEIYIFXFLFVISYSI 91
           +FP Y HE+    F  V+ Y++
Sbjct: 209 VFPTYAHELTYLLFGMVMMYAL 230


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 174 MVLGLGVYHRSISFLVA 224
           +VLGLGVY RS +   A
Sbjct: 260 LVLGLGVYGRSFTLASA 276


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 26  LFPNYNHEIYIFXFLFVISYSI 91
           +FP Y HE+    F  V+ Y++
Sbjct: 209 VFPTYAHELTYLLFGMVMMYAL 230


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 384 RNWEIRRKTKVP 349
           RNWEIR K   P
Sbjct: 129 RNWEIREKPYTP 140


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 280 FVLQRSICPVQLHLXIFYTSYYIRYF 357
           FV Q +IC   + L   Y+SY I  F
Sbjct: 96  FVRQFTICFDDVDLNSLYSSYEITRF 121


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 252 YPRGDTRRQGRPKTRWS 202
           YP G+ R+Q R +T ++
Sbjct: 61  YPAGNQRKQRRERTTFT 77


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 88  TIRNNKQKXKNVNFMV 41
           T+RNN+Q  + V F++
Sbjct: 126 TVRNNRQIRRMVVFLI 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,076
Number of Sequences: 336
Number of extensions: 2448
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)