Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0015.Seq
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   2.2  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           24   2.8  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           24   2.8  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    23   5.0  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    23   6.6  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   6.6  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   6.6  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    22   8.7  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
 Frame = -1

Query: 245 EGTPEDRGDQKRDGAMIYA*P------*DHTGPELLRTEPNGESWRRPMPRG 108
           EG P D+GD+   G++    P          GPE LR EP    +  P  +G
Sbjct: 458 EGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGPEGLRGEPGQPGYGIPGQKG 509


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = -3

Query: 273 EXTGYFRYPRGDTRRQGRPKTRWSDDIRLTLGPYWT 166
           E T   R+P   T       ++W+D    T  P WT
Sbjct: 124 EATTTTRFPTTTTTSAPTTPSQWTDPTITTTTPVWT 159


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = -3

Query: 273 EXTGYFRYPRGDTRRQGRPKTRWSDDIRLTLGPYWT 166
           E T   R+P   T       ++W+D    T  P WT
Sbjct: 124 EATTTTRFPTTTTTSAPTTPSQWTDPTITTTTPVWT 159


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
 Frame = +1

Query: 298 ICPVQLHLXIFYTSYYIRYFCLP---SYFPISNSVTKSDTQHASFH 426
           +C +   L  F   +  ++ C P      P+ N  T + T H  FH
Sbjct: 517 VCRMIKRLPPFRWLWSTKWCCKPHDSGTLPLGNGTTVNGTAHGRFH 562


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 351 VLLSSFLFPNFEFCH 395
           +L   +L P+F+FCH
Sbjct: 218 ILSQYYLQPDFQFCH 232


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 155 RTEPNGESWRRPMPRGT 105
           R  P G ++RR MPR T
Sbjct: 103 RGGPGGSNYRRYMPRAT 119


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -3

Query: 273 EXTGYFRYPRGDTRRQGRPKTRWSDDIRLTLGPYWT 166
           E T   ++P   T       ++W+D    T  P WT
Sbjct: 125 EATTTTKFPTTTTTSAPTTPSQWTDPTITTTTPVWT 160


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 211 RFWSPLSSGVPSWIP 255
           R W     GVPSW+P
Sbjct: 735 RGWLIPMGGVPSWLP 749


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,005
Number of Sequences: 2352
Number of extensions: 9428
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)