Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0015.Seq
         (449 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y10931-1|CAA71861.1| 1142|Homo sapiens symplekin protein.              29   7.3  
U49240-1|AAC50667.1| 1142|Homo sapiens symplekin protein.              29   7.3  
BC006567-1|AAH06567.1| 1142|Homo sapiens SYMPK protein protein.        29   7.3  
BC006536-1|AAH06536.1| 1142|Homo sapiens SYMPK protein protein.        29   7.3  
AK223519-1|BAD97239.1|  314|Homo sapiens melanoma antigen, famil...    29   7.3  
U03735-1|AAA17446.1|  314|Homo sapiens MAGE-3 antigen protein.         29   9.7  
CR541774-1|CAG46573.1|  314|Homo sapiens MAGEA3 protein.               29   9.7  
CR541767-1|CAG46566.1|  314|Homo sapiens MAGEA3 protein.               29   9.7  
BC017389-1|AAH17389.1|  314|Homo sapiens melanoma antigen family...    29   9.7  
BC016803-1|AAH16803.1|  314|Homo sapiens melanoma antigen family...    29   9.7  
BC011744-1|AAH11744.1|  314|Homo sapiens melanoma antigen family...    29   9.7  
BC005963-1|AAH05963.1|  314|Homo sapiens melanoma antigen family...    29   9.7  
BC000340-1|AAH00340.1|  314|Homo sapiens melanoma antigen family...    29   9.7  

>Y10931-1|CAA71861.1| 1142|Homo sapiens symplekin protein.
          Length = 1142

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 175  ILDQSC*GPSPMERAGGGLCHEARRTPR 92
            +LD S  GP P E A GGL  +  R+P+
Sbjct: 1086 LLDSSLEGPLPKETAAGGLTLKEERSPQ 1113


>U49240-1|AAC50667.1| 1142|Homo sapiens symplekin protein.
          Length = 1142

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 175  ILDQSC*GPSPMERAGGGLCHEARRTPR 92
            +LD S  GP P E A GGL  +  R+P+
Sbjct: 1086 LLDSSLEGPLPKETAAGGLTLKEERSPQ 1113


>BC006567-1|AAH06567.1| 1142|Homo sapiens SYMPK protein protein.
          Length = 1142

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 175  ILDQSC*GPSPMERAGGGLCHEARRTPR 92
            +LD S  GP P E A GGL  +  R+P+
Sbjct: 1086 LLDSSLEGPLPKETAAGGLTLKEERSPQ 1113


>BC006536-1|AAH06536.1| 1142|Homo sapiens SYMPK protein protein.
          Length = 1142

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 175  ILDQSC*GPSPMERAGGGLCHEARRTPR 92
            +LD S  GP P E A GGL  +  R+P+
Sbjct: 1086 LLDSSLEGPLPKETAAGGLTLKEERSPQ 1113


>AK223519-1|BAD97239.1|  314|Homo sapiens melanoma antigen, family
           A, 3 variant protein.
          Length = 314

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2

Query: 188 RRISSLHLVFGRPCLLVSPLGYLK*PVYSTCL 283
           +  SSL LVFG   + V P+G+L   +++TCL
Sbjct: 153 KAFSSLQLVFGIELMEVDPIGHLY--IFATCL 182


>U03735-1|AAA17446.1|  314|Homo sapiens MAGE-3 antigen protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +2

Query: 197 SSLHLVFGRPCLLVSPLGYLK*PVYSTCL 283
           SSL LVFG   + V P+G+L   +++TCL
Sbjct: 156 SSLQLVFGIELMEVDPIGHLY--IFATCL 182


>CR541774-1|CAG46573.1|  314|Homo sapiens MAGEA3 protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +2

Query: 197 SSLHLVFGRPCLLVSPLGYLK*PVYSTCL 283
           SSL LVFG   + V P+G+L   +++TCL
Sbjct: 156 SSLQLVFGIELMEVDPIGHLY--IFATCL 182


>CR541767-1|CAG46566.1|  314|Homo sapiens MAGEA3 protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +2

Query: 197 SSLHLVFGRPCLLVSPLGYLK*PVYSTCL 283
           SSL LVFG   + V P+G+L   +++TCL
Sbjct: 156 SSLQLVFGIELMEVDPIGHLY--IFATCL 182


>BC017389-1|AAH17389.1|  314|Homo sapiens melanoma antigen family A,
           3 protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +2

Query: 197 SSLHLVFGRPCLLVSPLGYLK*PVYSTCL 283
           SSL LVFG   + V P+G+L   +++TCL
Sbjct: 156 SSLQLVFGIELMEVDPIGHLY--IFATCL 182


>BC016803-1|AAH16803.1|  314|Homo sapiens melanoma antigen family A,
           3 protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +2

Query: 197 SSLHLVFGRPCLLVSPLGYLK*PVYSTCL 283
           SSL LVFG   + V P+G+L   +++TCL
Sbjct: 156 SSLQLVFGIELMEVDPIGHLY--IFATCL 182


>BC011744-1|AAH11744.1|  314|Homo sapiens melanoma antigen family A,
           3 protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +2

Query: 197 SSLHLVFGRPCLLVSPLGYLK*PVYSTCL 283
           SSL LVFG   + V P+G+L   +++TCL
Sbjct: 156 SSLQLVFGIELMEVDPIGHLY--IFATCL 182


>BC005963-1|AAH05963.1|  314|Homo sapiens melanoma antigen family A,
           3 protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +2

Query: 197 SSLHLVFGRPCLLVSPLGYLK*PVYSTCL 283
           SSL LVFG   + V P+G+L   +++TCL
Sbjct: 156 SSLQLVFGIELMEVDPIGHLY--IFATCL 182


>BC000340-1|AAH00340.1|  314|Homo sapiens melanoma antigen family A,
           3 protein.
          Length = 314

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +2

Query: 197 SSLHLVFGRPCLLVSPLGYLK*PVYSTCL 283
           SSL LVFG   + V P+G+L   +++TCL
Sbjct: 156 SSLQLVFGIELMEVDPIGHLY--IFATCL 182


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,135,692
Number of Sequences: 237096
Number of extensions: 1536830
Number of successful extensions: 3058
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3058
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)