Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0014.Seq
(338 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 5.4
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 5.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 5.4
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 5.4
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 5.4
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 5.4
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 5.4
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 5.4
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 5.4
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 5.4
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 5.4
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 5.4
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 5.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 5.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 20 7.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 20 7.1
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 20 7.1
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 20 7.1
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 20 7.1
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 20 7.1
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 20 7.1
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 20 7.1
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 20 7.1
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 20 9.4
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYKYSNYNNYNNN 100
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYKYSNYNNYNNN 100
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYKYSNYNNYNNN 100
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYKYSNYNNYNNN 100
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYKYSNYNNYNNN 100
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYKYSNYNNYNNN 100
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYKYSNYNNYNNN 100
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYKYSNYNNYNNN 100
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYKYSNYNNYNNN 100
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYKYSNYNNYNNN 100
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYKYSNYNNYNNN 100
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYKYSNYNNYNNN 100
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYKYSNYNNYNNN 100
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 316 SSLSNNYKYSNYNNYNNN 333
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYNYSNYNNYNNN 100
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYNYSNYNNYNNN 100
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYNYSNYNNYNNN 100
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYNYSNYNNYNNN 100
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYNYSNYNNYNNN 100
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYNYSNYNNYNNN 100
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYNYSNYNNYNNN 100
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYNYSNYNNYNNN 100
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 7.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 131 TSLSTKHLYSSLN*YSHN 184
+SLS + YS+ N Y++N
Sbjct: 83 SSLSNNYNYSNYNNYNNN 100
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 19.8 bits (39), Expect = 9.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 69 DTYYFNIKCYYYILLEFSIKLRHYQQNICILH 164
DTY++N K Y + KL Q+ IL+
Sbjct: 121 DTYFYNGKHSYVHTITVPNKLLRISQDGDILY 152
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,027
Number of Sequences: 438
Number of extensions: 1239
Number of successful extensions: 24
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7715466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -