Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0013.Seq
         (269 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0NEB3 Cluster: ENSANGP00000031000; n=1; Anopheles gamb...    54   5e-07
UniRef50_Q16QQ2 Cluster: Putative uncharacterized protein; n=2; ...    51   6e-06
UniRef50_UPI0000D55B18 Cluster: PREDICTED: similar to ZK899.2; n...    46   2e-04
UniRef50_UPI0000E4A110 Cluster: PREDICTED: hypothetical protein;...    37   0.10 
UniRef50_A7RXC1 Cluster: Predicted protein; n=2; Nematostella ve...    37   0.10 
UniRef50_A5K9K5 Cluster: Phosphatidylinositol 3-kinase, putative...    33   1.2  
UniRef50_A4BM03 Cluster: Putative uncharacterized protein; n=1; ...    33   1.6  
UniRef50_Q8A698 Cluster: Putative uncharacterized protein; n=1; ...    31   3.8  
UniRef50_Q02ZE2 Cluster: Minor tail protein gp26-like protein; n...    31   5.0  
UniRef50_Q9G097 Cluster: Tape measure protein; n=3; unclassified...    31   5.0  
UniRef50_O69758 Cluster: Positive transcriptional regulator; n=3...    30   8.8  

>UniRef50_A0NEB3 Cluster: ENSANGP00000031000; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000031000 - Anopheles gambiae
           str. PEST
          Length = 234

 Score = 54.4 bits (125), Expect = 5e-07
 Identities = 20/46 (43%), Positives = 32/46 (69%)
 Frame = +3

Query: 90  QLWAAQPTYIISXAVYVLAGLLTLFHAFKKGGRWSXFWLGTVLXGI 227
           +L+ AQP+Y++S A+ ++ GLL+L HA  +GGRW   W+   L G+
Sbjct: 29  ELFNAQPSYVVSQALCIIGGLLSLAHALHRGGRWPFLWMAGALTGV 74


>UniRef50_Q16QQ2 Cluster: Putative uncharacterized protein; n=2;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 433

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 21/46 (45%), Positives = 30/46 (65%)
 Frame = +3

Query: 90  QLWAAQPTYIISXAVYVLAGLLTLFHAFKKGGRWSXFWLGTVLXGI 227
           +L+ AQP+YI   A + L  LL + HAFK+GGRW   +LG +  G+
Sbjct: 34  ELYRAQPSYIWCQASFFLGALLCIIHAFKRGGRWPYIFLGALCHGL 79


>UniRef50_UPI0000D55B18 Cluster: PREDICTED: similar to ZK899.2; n=1;
           Tribolium castaneum|Rep: PREDICTED: similar to ZK899.2 -
           Tribolium castaneum
          Length = 437

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = +3

Query: 105 QPTYIISXAVYVLAGLLTLFHAFKKGGRWSXFWLGTVLXGI 227
           +PTY+IS   +   G+ TL HA  +GGR    WLG ++ GI
Sbjct: 38  EPTYLISQFAFTFGGIATLLHALIRGGRLPYLWLGILIHGI 78


>UniRef50_UPI0000E4A110 Cluster: PREDICTED: hypothetical protein;
           n=3; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 485

 Score = 36.7 bits (81), Expect = 0.10
 Identities = 12/46 (26%), Positives = 28/46 (60%)
 Frame = +3

Query: 81  DIKQLWAAQPTYIISXAVYVLAGLLTLFHAFKKGGRWSXFWLGTVL 218
           D +++W    ++ ++  +Y +   L + HAFK+GGR++ + L  ++
Sbjct: 89  DPREIWTNHSSFFVAEILYHILAFLLIRHAFKRGGRFAWYLLAILI 134


>UniRef50_A7RXC1 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 419

 Score = 36.7 bits (81), Expect = 0.10
 Identities = 12/48 (25%), Positives = 27/48 (56%)
 Frame = +3

Query: 87  KQLWAAQPTYIISXAVYVLAGLLTLFHAFKKGGRWSXFWLGTVLXGIS 230
           +++W  +PT+++   V++L   +T  HA + G  +   W+   L G++
Sbjct: 19  QEIWREEPTFLMCEIVFLLIAAMTFRHALRNGKTYILLWITLSLHGLT 66


>UniRef50_A5K9K5 Cluster: Phosphatidylinositol 3-kinase, putative;
           n=1; Plasmodium vivax|Rep: Phosphatidylinositol
           3-kinase, putative - Plasmodium vivax
          Length = 1779

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -1

Query: 224 PXKYGPEPKXRPSSAFFKSMK*C*KASQNVNGXRYYICRLGSP 96
           P + GP P  R S AF++SMK C +  + V   R      GSP
Sbjct: 528 PIEGGPPPHRRRSDAFYQSMKRCSRIERYVRSVRKIYFGWGSP 570


>UniRef50_A4BM03 Cluster: Putative uncharacterized protein; n=1;
           Nitrococcus mobilis Nb-231|Rep: Putative uncharacterized
           protein - Nitrococcus mobilis Nb-231
          Length = 293

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +3

Query: 114 YIISXAVYVLAGLLTLFHAFKKGGRWSXFWLGTV 215
           +++S AV+VL  L  L H F  G RW   WLG V
Sbjct: 228 FVLS-AVFVLQALAVL-HTFSAGQRWGKLWLGLV 259


>UniRef50_Q8A698 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides thetaiotaomicron|Rep: Putative
           uncharacterized protein - Bacteroides thetaiotaomicron
          Length = 811

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = -2

Query: 211 VPSQKXDHLPPFLKA*NNVKRPAKT*TA*DIIYVGWAAH--NCLMSF---FRTRPIQPRF 47
           +P+Q  DHLP FLK      +PA++    DI+ +G  A+   CL      F  RP  P+ 
Sbjct: 364 IPNQVYDHLPDFLK---RAMKPARSKRERDILLLGLIANLSGCLPQVRISFDQRPYSPQL 420

Query: 46  H 44
           +
Sbjct: 421 Y 421


>UniRef50_Q02ZE2 Cluster: Minor tail protein gp26-like protein; n=1;
           Lactococcus lactis subsp. cremoris SK11|Rep: Minor tail
           protein gp26-like protein - Lactococcus lactis subsp.
           cremoris (strain SK11)
          Length = 874

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 12/35 (34%), Positives = 24/35 (68%)
 Frame = +3

Query: 78  NDIKQLWAAQPTYIISXAVYVLAGLLTLFHAFKKG 182
           N I+ LW A  T++I+ A  ++ G++  +++FK+G
Sbjct: 602 NTIQSLWGAFTTWVINMAKSIVDGIVNGWNSFKQG 636


>UniRef50_Q9G097 Cluster: Tape measure protein; n=3; unclassified
           Siphoviridae|Rep: Tape measure protein - Lactococcus
           phage TP901-1
          Length = 937

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 12/35 (34%), Positives = 24/35 (68%)
 Frame = +3

Query: 78  NDIKQLWAAQPTYIISXAVYVLAGLLTLFHAFKKG 182
           N I+ LW A  T++I+ A  ++ G++  +++FK+G
Sbjct: 665 NTIQSLWGAFTTWVINMAKSIVDGIVNGWNSFKQG 699


>UniRef50_O69758 Cluster: Positive transcriptional regulator; n=3;
           Proteobacteria|Rep: Positive transcriptional regulator -
           Pseudomonas fluorescens
          Length = 299

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 145 LAF*HYFMLLKKAEDGLXFGSGPY 216
           L F H+F+ L+   DGL FG GP+
Sbjct: 218 LRFDHFFVTLQAVVDGLGFGIGPF 241


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,422,515
Number of Sequences: 1657284
Number of extensions: 3078098
Number of successful extensions: 5198
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5198
length of database: 575,637,011
effective HSP length: 67
effective length of database: 464,598,983
effective search space used: 10221177626
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)