Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--1000
(592 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 163 2e-39
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 151 2e-35
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 142 4e-33
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 130 2e-29
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 127 2e-28
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 124 2e-27
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 109 5e-23
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 104 1e-21
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 103 4e-21
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 91 2e-17
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 90 4e-17
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 88 2e-16
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 85 2e-15
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 82 8e-15
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 79 6e-14
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 78 1e-13
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 75 9e-13
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 74 3e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 72 1e-11
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 70 5e-11
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 69 6e-11
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 69 8e-11
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 69 8e-11
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 69 1e-10
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 68 2e-10
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 68 2e-10
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 68 2e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 8e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 66 8e-10
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 63 5e-09
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 62 7e-09
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 62 9e-09
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 61 2e-08
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 61 2e-08
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 57 3e-07
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 57 3e-07
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 56 5e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 54 2e-06
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 52 1e-05
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 4e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 50 5e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 49 9e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 48 1e-04
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 48 2e-04
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 47 3e-04
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 47 3e-04
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 46 5e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 46 9e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 45 0.001
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 45 0.002
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 45 0.002
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 44 0.002
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 44 0.002
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 43 0.005
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 43 0.006
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 42 0.008
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 42 0.008
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 42 0.011
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 42 0.014
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 41 0.025
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 40 0.044
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 40 0.058
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 40 0.058
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 39 0.10
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 38 0.13
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 38 0.13
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.18
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 38 0.18
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 37 0.41
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 36 0.54
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 0.54
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.94
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 35 1.2
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 35 1.6
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 35 1.6
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 34 2.2
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 2.9
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 34 2.9
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 34 2.9
UniRef50_A3Y6Q7 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 33 5.0
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 33 6.6
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 33 6.6
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.6
UniRef50_Q5K967 Cluster: Oligopeptide transporter, putative; n=5... 33 6.6
UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_Q00SQ1 Cluster: Kinesin; n=2; Ostreococcus|Rep: Kinesin... 32 8.7
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 163 bits (397), Expect = 2e-39
Identities = 79/88 (89%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTR KAFVAIGD NGH+GLGVKCSKEVATAI
Sbjct: 92 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAI 151
Query: 182 RGAIILAKLSVLPVRRGYWGNKIGS-HT 262
RGAIILAKLS++PVRRGYWGNKIG HT
Sbjct: 152 RGAIILAKLSIVPVRRGYWGNKIGKPHT 179
Score = 120 bits (290), Expect = 2e-26
Identities = 60/94 (63%), Positives = 65/94 (69%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGK 432
KPHTVPCKVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T LG
Sbjct: 176 KPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGN 235
Query: 433 FC*SHIRCHCQDICLPHS*LVEGYPVTKSPYSEF 534
F + + L + TKSPY EF
Sbjct: 236 FAKATFDAISKTYSYLTPDLWKETVFTKSPYQEF 269
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 151 bits (365), Expect = 2e-35
Identities = 74/88 (84%), Positives = 77/88 (87%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
EIIDFFLG SL DEVLKIMPVQKQT AGQ TR KAFV IGD NGH+GL VKCSKEVATAI
Sbjct: 32 EIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAI 91
Query: 182 RGAIILAKLSVLPVRRGYWGNKIGS-HT 262
RGAIILAKLS++PV RGYWGNKIG HT
Sbjct: 92 RGAIILAKLSIVPVCRGYWGNKIGKPHT 119
Score = 49.6 bits (113), Expect = 5e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAP 324
KPHTVPCKVTG+C SV V LIPAP
Sbjct: 116 KPHTVPCKVTGRCSSVLVHLIPAP 139
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 142 bits (345), Expect = 4e-33
Identities = 63/88 (71%), Positives = 79/88 (89%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
+I+D+FL P LNDEV+K++PVQKQTRAGQRTR KAFV IGD++GH+GLG+KC+KEVATAI
Sbjct: 66 QIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAI 124
Query: 182 RGAIILAKLSVLPVRRGYWGNKIGS-HT 262
RGAII+ KLS++P+RRGYWG +G HT
Sbjct: 125 RGAIIMGKLSIMPIRRGYWGTALGDPHT 152
Score = 103 bits (246), Expect = 4e-21
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +1
Query: 256 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGKF 435
PHTVP KV+GKCGSVTVRL+PAPRG G+V+APV K+ LQ+AG++DCYT +RGST LG F
Sbjct: 150 PHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLGNF 209
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 130 bits (315), Expect = 2e-29
Identities = 62/72 (86%), Positives = 66/72 (91%)
Frame = +2
Query: 38 DEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 217
DEVLKIMPVQKQT AGQRTR AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 218 PVRRGYWGNKIG 253
P+R+GYWGNKIG
Sbjct: 108 PLRQGYWGNKIG 119
Score = 109 bits (261), Expect = 6e-23
Identities = 56/94 (59%), Positives = 62/94 (65%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGK 432
KP+TVPCKVTG CGSV V LIPAPRGTG+VSAPVPKKLL MAG+ DCYTSAR T LG
Sbjct: 120 KPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCYTSARDCTASLGN 179
Query: 433 FC*SHIRCHCQDICLPHS*LVEGYPVTKSPYSEF 534
F + + L + TKSPY EF
Sbjct: 180 FAKATFDTISKTYTYLTPDLWKETVFTKSPYEEF 213
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 127 bits (306), Expect = 2e-28
Identities = 58/88 (65%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
+I++ F+G L DEV+KI PVQKQT AGQR R KAFV +GD NGHIGLGVK KEVA +I
Sbjct: 82 QIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSI 141
Query: 182 RGAIILAKLSVLPVRRGYWGNKIGS-HT 262
+G++ILAKL+++PVRRGYWG+K+G HT
Sbjct: 142 QGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 83.4 bits (197), Expect = 4e-15
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLG 429
+PHT+P KV GKCGSV VRLIPAPRG GIV++ KK+L MAG+ D YT +RG T LG
Sbjct: 166 EPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLG 224
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 124 bits (298), Expect = 2e-27
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
+IID L P L DEV+ I PVQKQTRAGQRTR KA V +GD+NGH+GLG+K +KEVA AI
Sbjct: 67 QIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAI 125
Query: 182 RGAIILAKLSVLPVRRGYWGNKIG 253
R II+AKLSV+P+RRGYWG +G
Sbjct: 126 RAGIIIAKLSVIPIRRGYWGTNLG 149
Score = 86.6 bits (205), Expect = 4e-16
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXL 426
+PH++ K TGKCGSVTVRLIPAPRG+GIV++P KKLLQ+AGV+D YT + G T L
Sbjct: 150 QPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTL 207
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 109 bits (262), Expect = 5e-23
Identities = 51/69 (73%), Positives = 55/69 (79%)
Frame = +1
Query: 223 PKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTS 402
P+ G + RKPHTVP KVTG+CGSV VRLIPAPRGTG VSAPVPKKLL MAG+ DCYTS
Sbjct: 106 PRGYWGNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTS 165
Query: 403 ARGSTXXLG 429
ARG T G
Sbjct: 166 ARGHTATWG 174
Score = 93.9 bits (223), Expect = 3e-18
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +2
Query: 89 RTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 250
+ R KAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEI 114
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 104 bits (250), Expect = 1e-21
Identities = 51/90 (56%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A+AI
Sbjct: 53 EIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAI 112
Query: 182 RGAIILAKLSVLPVRRGYWGNKIGS-HTPS 268
RGAI AK ++ PVR G W G HT S
Sbjct: 113 RGAIARAKCAIRPVRLGLWDGAQGKPHTVS 142
Score = 78.2 bits (184), Expect = 1e-13
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGK 432
KPHTV CK +GKCG+ V++IPAPRGTGI+S V KK+ ++AG++D YT + G+T
Sbjct: 137 KPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTTEN 196
Query: 433 FC*SHIRC--HCQDICLPHS*LVEGYPVTKSPYSEF 534
F + I + LP E P T +P EF
Sbjct: 197 FAKASIAALEATSSMILPDQ--WEEKPRTLNPLLEF 230
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 103 bits (246), Expect = 4e-21
Identities = 55/97 (56%), Positives = 60/97 (61%)
Frame = +1
Query: 244 QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXX 423
Q R KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T
Sbjct: 115 QTRAGQRTRFKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT 174
Query: 424 LGKFC*SHIRCHCQDICLPHS*LVEGYPVTKSPYSEF 534
LG F + + L + TKSPY EF
Sbjct: 175 LGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEF 211
Score = 64.9 bits (151), Expect = 1e-09
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXK 103
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTR K
Sbjct: 92 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 91.1 bits (216), Expect = 2e-17
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGL 145
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTR KAFVAIGD NGH+GL
Sbjct: 67 EIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 89.8 bits (213), Expect = 4e-17
Identities = 46/72 (63%), Positives = 50/72 (69%)
Frame = +1
Query: 220 SPKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 399
S ++ LG + K H V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYT
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYT 60
Query: 400 SARGSTXXLGKF 435
SARG T L F
Sbjct: 61 SARGCTASLDYF 72
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 87.8 bits (208), Expect = 2e-16
Identities = 49/87 (56%), Positives = 54/87 (62%)
Frame = +1
Query: 274 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGKFC*SHIR 453
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT ARG T LG F +
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKATFD 183
Query: 454 CHCQDICLPHS*LVEGYPVTKSPYSEF 534
+ L + TKSPY EF
Sbjct: 184 AISKIYSYLTPDLWKETVFTKSPYQEF 210
Score = 57.6 bits (133), Expect = 2e-07
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXK 103
EIIDFFLG SL +EVLK MPVQKQTRAGQ TR K
Sbjct: 92 EIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGK 432
+PH VPC+VTG+CGS+ V LIPAPRGTG VSAPVP KLL MAG+ D +SA G T LG
Sbjct: 152 EPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTATLGN 209
Query: 433 F 435
F
Sbjct: 210 F 210
Score = 53.2 bits (122), Expect = 4e-06
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +2
Query: 59 PVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 238
P+ KQT Q+TR KA V +G + GH+ LG+K S EVA IILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATG 147
Query: 239 GNKIGSH 259
G ++ H
Sbjct: 148 GKRLEPH 154
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 82.2 bits (194), Expect = 8e-15
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +1
Query: 238 G*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 411
G + KPHTV CKVTG GSV++ LIPAPR T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
Score = 73.3 bits (172), Expect = 4e-12
Identities = 44/88 (50%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
EIID FLG +L DEVLK +P QK TR GQ + GD NGH+ G+ EVA I
Sbjct: 80 EIIDIFLGAALKDEVLKSLPEQKGTRVGQ------YYKAGDYNGHVITGL---DEVANTI 130
Query: 182 RGAIILAKLSVLPVRRGYWGNKIGS-HT 262
+ IIL KL ++PV RGY G+K HT
Sbjct: 131 QRVIILTKLPIVPVWRGYCGSKTSKPHT 158
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 79.4 bits (187), Expect = 6e-14
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIG 142
EIIDFFLG SL DEVLKIMPV+K+TRAGQRTR KAFVAI D NG+ G
Sbjct: 20 EIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
Score = 38.7 bits (86), Expect = 0.10
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +3
Query: 216 YQSEEVTGVTR*EATHRPLQGHRQVWFRNSPADSCPSWYWYCVCASS*EASSDGWCTGLL 395
++++ + G +A HRPLQG R + +W+ + + + EA+ D W LL
Sbjct: 91 HRAQRLLGEQDRQAPHRPLQGDRPLRLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLL 150
Query: 396 HVSSWFNXXPWEI 434
H+S + P ++
Sbjct: 151 HLSQGLHCHPGQL 163
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 78.2 bits (184), Expect = 1e-13
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = +1
Query: 316 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGKFC*SHIRCHCQDICLPHS*LV 495
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T LG F + + L
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLW 60
Query: 496 EGYPVTKSPYSEF 534
+ TKSPY EF
Sbjct: 61 KETVFTKSPYQEF 73
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 75.4 bits (177), Expect = 9e-13
Identities = 39/82 (47%), Positives = 56/82 (68%)
Frame = -1
Query: 247 LVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLXTCALSGTCLF 68
LVTPV S+ N QL +D+S ++G G FLAAL QT++ V V +G++ L L+GT L
Sbjct: 29 LVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLL 88
Query: 67 LYRHDLKNLIIQGRAEEEINDL 2
L HDL++ ++Q A+EEI+DL
Sbjct: 89 LDGHDLQHFVLQRAAQEEIDDL 110
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 73.7 bits (173), Expect = 3e-12
Identities = 43/91 (47%), Positives = 50/91 (54%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGKFC* 441
TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG T L F
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDNFDK 219
Query: 442 SHIRCHCQDICLPHS*LVEGYPVTKSPYSEF 534
+ L +G KS Y EF
Sbjct: 220 ATFNAISNTYSYLTPNLWKGLVFAKSTYLEF 250
Score = 50.8 bits (116), Expect = 2e-05
Identities = 32/59 (54%), Positives = 36/59 (61%)
Frame = +2
Query: 5 IIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
II FFL SL DE IMPVQ QT R K FV+I D + H+ L KCSK+ ATAI
Sbjct: 92 IIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI 146
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 71.7 bits (168), Expect = 1e-11
Identities = 38/88 (43%), Positives = 57/88 (64%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
EI+D L P L ++VL + VQ+ ++G+R R +A V +G+ NG++G+G+ SKEV AI
Sbjct: 48 EIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAI 106
Query: 182 RGAIILAKLSVLPVRRGYWGNKIGSHTP 265
R AI AKLS++ VR G + G +P
Sbjct: 107 RKAIAHAKLSLIKVRVGCGSWECGCGSP 134
Score = 63.3 bits (147), Expect = 4e-09
Identities = 27/54 (50%), Positives = 36/54 (66%)
Frame = +1
Query: 256 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
PH++P G CGSV V L+PAPRG G+V+ V K +L +AGV+D +T G T
Sbjct: 134 PHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDT 187
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 69.7 bits (163), Expect = 5e-11
Identities = 32/57 (56%), Positives = 46/57 (80%)
Frame = +1
Query: 247 DRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
D+K H+VP KV GK GSVT+ +IPAPRG G+V+ K+LL++AG++D +T+A+GST
Sbjct: 162 DQK-HSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGST 217
Score = 59.3 bits (137), Expect = 7e-08
Identities = 30/69 (43%), Positives = 42/69 (60%)
Frame = +2
Query: 26 PSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 205
P L EV+ + +QK T GQ TR KA VA G+ NG++G+G SK++ AI A A
Sbjct: 85 PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAY 144
Query: 206 LSVLPVRRG 232
L+V P++ G
Sbjct: 145 LNVNPIKMG 153
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 69.3 bits (162), Expect = 6e-11
Identities = 29/79 (36%), Positives = 52/79 (65%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
++++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK S + I
Sbjct: 98 KLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKSSMDSKAGI 157
Query: 182 RGAIILAKLSVLPVRRGYW 238
+ A+ AKL++ +RRGYW
Sbjct: 158 KAALRKAKLAITKIRRGYW 176
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/58 (43%), Positives = 42/58 (72%)
Frame = +1
Query: 244 QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
++ KP+T+ K +GK GSV V + PAP+GTGIV++ +L+++G++DC+T + G T
Sbjct: 179 EEGKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCFTKSFGRT 236
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 68.9 bits (161), Expect = 8e-11
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
+I+D FL +L +E L I PVQKQT AGQ+TR KA+V +GD++ HIGLG K +KEV AI
Sbjct: 96 QIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAI 154
Query: 182 R 184
+
Sbjct: 155 Q 155
Score = 33.1 bits (72), Expect = 5.0
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +3
Query: 183 EALLSLLSCQ--FYQSEE-VTGVTR*EATHRPLQGHRQVWFRNSPADSCPSWYWYCVCAS 353
+ L +L CQ F S++ + G TH P+Q R+ S S YWY
Sbjct: 155 QELCNLNQCQTQFDSSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHH 214
Query: 354 S*EASSDGWCTGLLH 398
E ++GW LLH
Sbjct: 215 IQEGLTNGWYPRLLH 229
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 68.9 bits (161), Expect = 8e-11
Identities = 33/77 (42%), Positives = 52/77 (67%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
EI+D L P L+D+VL + +Q+ T +G+R R +G+++G++GL + KEVA+ I
Sbjct: 24 EIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVASTI 82
Query: 182 RGAIILAKLSVLPVRRG 232
R AI AKL+++PV RG
Sbjct: 83 RKAIDKAKLNMIPVMRG 99
Score = 51.6 bits (118), Expect = 1e-05
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
+VP K+TG+ GS V L+PAP G G+V + +++L +AGV D ++ + G T
Sbjct: 112 SVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQT 163
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +1
Query: 250 RKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
R+PH+VP V GK GSV VRLIP PRG G+V V KK+L++AGVQD ++ G T
Sbjct: 136 RRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGET 191
Score = 62.1 bits (144), Expect = 9e-09
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Frame = +2
Query: 2 EIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEV 169
EIID L P +N EVL I + T +G+R R + A+G+ +G++GLG+ KEV
Sbjct: 48 EIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEV 106
Query: 170 ATAIRGAIILAKLSVLPVRRG 232
AIR AI AKL+++ ++RG
Sbjct: 107 GIAIRKAINYAKLNIIEIKRG 127
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/58 (60%), Positives = 40/58 (68%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXL 426
KPHTV C+VT SV V I APRGT I+SAPVPKKLL+MA + D + ARG T L
Sbjct: 76 KPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDDGDSLARGCTAIL 133
Score = 64.5 bits (150), Expect = 2e-09
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +2
Query: 11 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 190
D L ++ + ++I +K+T AGQ+TR KAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 191 IILAKLSVLPVRRGYWGNKIGS-HTPS 268
IIL + S+ G+ GNKI HT S
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVS 81
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 67.7 bits (158), Expect = 2e-10
Identities = 36/80 (45%), Positives = 55/80 (68%)
Frame = -1
Query: 241 TPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLXTCALSGTCLFLY 62
TPVTSSDW N QL D++ S+G+ +FL+ L+TQT++TV V N + L + +L+ + L L
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLD 171
Query: 61 RHDLKNLIIQGRAEEEINDL 2
R D+ N I+Q ++ +NDL
Sbjct: 172 RLDVHNFILQ-VWQQLVNDL 190
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/57 (52%), Positives = 45/57 (78%)
Frame = +1
Query: 247 DRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
D+K H+VP KV GK GSV + ++PAPRG G+V+ ++LL++AG++D YT+A+GST
Sbjct: 143 DQK-HSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGST 198
Score = 55.6 bits (128), Expect = 8e-07
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +2
Query: 26 PSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 205
P L EV+ + +QK T GQ TR KA VA G+ NG++G+G +K++ AI A A
Sbjct: 66 PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQAL 125
Query: 206 LSVLPVRRG 232
L+V P++ G
Sbjct: 126 LNVGPIKLG 134
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 8e-10
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +2
Query: 65 QKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 244
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L + R
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLGETRLSRSTLVQ 60
Query: 245 -KIGSHTPSL 271
K+ SH S+
Sbjct: 61 YKVTSHYGSV 70
Score = 65.7 bits (153), Expect = 8e-10
Identities = 35/57 (61%), Positives = 37/57 (64%)
Frame = +1
Query: 265 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGKF 435
V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY SAR T L F
Sbjct: 59 VQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTATLYNF 115
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 65.7 bits (153), Expect = 8e-10
Identities = 34/77 (44%), Positives = 52/77 (67%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
EI+D L P L EV+ I VQKQT AG+ +R K V +G+ +G++ +G +K++ AI
Sbjct: 45 EIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAI 103
Query: 182 RGAIILAKLSVLPVRRG 232
+ AI AK++++PVRRG
Sbjct: 104 QKAIRDAKMNIIPVRRG 120
Score = 65.7 bits (153), Expect = 8e-10
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGK 432
+PH++P KV GK GSV V L+PAP+GTG+V V K LL AG++D +++ +G T
Sbjct: 130 EPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTEN 189
Query: 433 F 435
F
Sbjct: 190 F 190
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 62.9 bits (146), Expect = 5e-09
Identities = 31/88 (35%), Positives = 52/88 (59%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
+I+D+ + P L DEV+ I Q+ T +G+R +G+ NG++G+G +KE A AI
Sbjct: 37 QIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAI 95
Query: 182 RGAIILAKLSVLPVRRGYWGNKIGSHTP 265
+ AI AKL+++ ++RG + G P
Sbjct: 96 KKAIDNAKLNIIEIKRGCGSWECGCGKP 123
Score = 60.1 bits (139), Expect = 4e-08
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
KPHT+P V GK GSV+V L PAP+G G+ V K +L+MAG+ D + A G T
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHT 176
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 62.5 bits (145), Expect = 7e-09
Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
EI+D L P L DEVL I VQ+ T +G+R + + VA+G+ +G++G +V AI
Sbjct: 90 EIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVGGAI 148
Query: 182 RGAIILAKLSVLPVRR--GYWGNKIGSHTPSLAR 277
+ AI +AKL+++ V R G W ++ G T SL R
Sbjct: 149 QKAIDVAKLNIIEVDRGSGSWEDQPGG-TNSLTR 181
Score = 54.0 bits (124), Expect = 2e-06
Identities = 22/48 (45%), Positives = 35/48 (72%)
Frame = +1
Query: 274 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
K GK GSVTV + PAP+G G+ +A + +L++AGV+D +T++ G+T
Sbjct: 182 KAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNT 229
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 62.1 bits (144), Expect = 9e-09
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
E+ DF LG L D+VLK+M VQKQ +AG+R R K V I D N ++ LGV+ KE+ A+
Sbjct: 153 EVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAV 212
Query: 182 RGAIILAKLSV 214
+L+ + V
Sbjct: 213 CRTNVLSIILV 223
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 60.9 bits (141), Expect = 2e-08
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
EI DFFL SL D+VLKI+P+ + R Q TR +F I + GH G+GVKCSK+V TA+
Sbjct: 24 EINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVGTAV 81
Query: 182 RGAIILAKL-SVLPVRRGYWGNKIGSHTPSLARSPASV 292
+ + L S LP R Y GN I T R+ S+
Sbjct: 82 GLSSWSSFLSSCLP--RDYCGNNIRKPTYPCKRTGWSI 117
Score = 46.8 bits (106), Expect = 4e-04
Identities = 33/74 (44%), Positives = 40/74 (54%)
Frame = +1
Query: 208 VSSTSPKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 387
+SS P+ G RKP T PCK TG S++ L P IVS VP+KL+ A +
Sbjct: 90 LSSCLPRDYCGNNIRKP-TYPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASID 144
Query: 388 DCYTSARGSTXXLG 429
CYTSAR T LG
Sbjct: 145 SCYTSARSYTVTLG 158
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 60.9 bits (141), Expect = 2e-08
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
+PHTV + GK GSV V L PAPRG G+ +K+L++AG++D +T + G+T
Sbjct: 124 RPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNT 178
Score = 58.8 bits (136), Expect = 9e-08
Identities = 33/88 (37%), Positives = 51/88 (57%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
E++D + P L DEVL I VQ+ T +G+R + + VA+G+ +G IG +V AI
Sbjct: 39 EVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAI 97
Query: 182 RGAIILAKLSVLPVRRGYWGNKIGSHTP 265
+ AI +AKL+++ V RG + G P
Sbjct: 98 QKAIDIAKLNIIDVSRGCGSWECGCGRP 125
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/64 (46%), Positives = 38/64 (59%)
Frame = -3
Query: 428 PRXXVEPRADV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTLQGTVCGFL 249
P+ V+P A V QS P+ FLGT A+ +PVP GAG+ T TEP P+TL G +CG
Sbjct: 14 PKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCGAC 72
Query: 248 SCYP 237
P
Sbjct: 73 CLLP 76
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 57.2 bits (132), Expect = 3e-07
Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
+II+FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAA 104
Query: 182 RGAIILAKLSVLPVRRGYWGNKIGS-HT 262
+ AI L + + GY GNKIG+ HT
Sbjct: 105 QRAITLLSF-LFSTQTGYKGNKIGNPHT 131
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/44 (56%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +1
Query: 256 PHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 384
PHT+PC VT + V V L APRGTG VSA VPKKL +A +
Sbjct: 129 PHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 56.4 bits (130), Expect = 5e-07
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +1
Query: 256 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
PH++P +V GK GSV V L PAP+G GIV+ KK+ ++AG++D + + G T
Sbjct: 138 PHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFGKT 191
Score = 49.2 bits (112), Expect = 7e-05
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +2
Query: 65 QKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 232
QK+T G +TR + +GD +GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 54.0 bits (124), Expect = 2e-06
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +2
Query: 23 GPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 202
GP ++VL++ + K + G+ +A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 203 KLSVL--PVRRGY 235
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
Score = 33.9 bits (74), Expect = 2.9
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXL 426
K +++P ++ + G+ +V + PA GTG+V+ + +L++AG Q+ G+ L
Sbjct: 138 KDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAGYQNARGKQLGTDNAL 195
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 51.6 bits (118), Expect = 1e-05
Identities = 29/66 (43%), Positives = 39/66 (59%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
E+ DF L L D+VLK+M V+KQ AG+ R K V I N ++ LGV+ KE+ A+
Sbjct: 19 EVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELLIAV 78
Query: 182 RGAIIL 199
IIL
Sbjct: 79 CRTIIL 84
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 50.0 bits (114), Expect = 4e-05
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = +2
Query: 32 LNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 211
L + V+ + V K + G+R R A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 212 VLPV 223
++ V
Sbjct: 72 LISV 75
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 414
T+P ++ G+ GS V + PA GTG++S + +L++AGV D T + GS
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGS 131
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 49.6 bits (113), Expect = 5e-05
Identities = 19/54 (35%), Positives = 35/54 (64%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 414
K +T+P ++ GK G+ T+ + PA GTG+++ +++L++ GV D T +GS
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGS 128
Score = 46.0 bits (104), Expect = 7e-04
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +2
Query: 38 DEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 217
+++LKI V K T+ G+ A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 218 PV 223
+
Sbjct: 71 KI 72
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 48.8 bits (111), Expect = 9e-05
Identities = 25/67 (37%), Positives = 39/67 (58%)
Frame = +2
Query: 29 SLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 208
+ + V+KI + K T+ G+ R A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 209 SVLPVRR 229
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 46.8 bits (106), Expect = 4e-04
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +1
Query: 277 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 414
V G+ G+ V L+PAP GTGI++ + ++++AG D YT +RG+
Sbjct: 124 VNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGA 169
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/71 (32%), Positives = 42/71 (59%)
Frame = +2
Query: 11 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 190
DF G + + ++++ V K + G+ + IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 191 IILAKLSVLPV 223
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
Score = 34.7 bits (76), Expect = 1.6
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 390
T+P +V K + ++PA GTG+++ + +L++AGVQ+
Sbjct: 583 TIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVLELAGVQN 625
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +2
Query: 26 PSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 205
P L ++V+KI + K + G R R A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 206 LSVLPV 223
++ +
Sbjct: 73 KQLVRI 78
Score = 35.5 bits (78), Expect = 0.94
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLQMAGVQDCYTSARGS 414
T+P G+ G+ L PA +GTGIV+ + +L++ G+ D T GS
Sbjct: 84 TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGS 135
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGL 145
+I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 66 QIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
K HT+P +V GK S V L P+ GTGI++ + +++ AG+QD T + GS+
Sbjct: 96 KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLTKSWGSS 150
Score = 40.7 bits (91), Expect = 0.025
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +2
Query: 35 NDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 214
+++V+KI V K + G+R A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 215 LPV 223
+ +
Sbjct: 91 VKI 93
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 46.4 bits (105), Expect = 5e-04
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +2
Query: 32 LNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 211
L ++++ + + K T+ G+ R A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 212 VLPVR 226
+ V+
Sbjct: 138 MYKVK 142
Score = 40.3 bits (90), Expect = 0.033
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXL 426
K T+ +V GK G+ V + PAP+GTG+++ K +L++ G +D Y+ G L
Sbjct: 145 KNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNLGKNTSL 202
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 45.6 bits (103), Expect = 9e-04
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +2
Query: 38 DEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 217
+++++I K T+ G+ + +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 218 PV 223
V
Sbjct: 77 EV 78
Score = 42.3 bits (95), Expect = 0.008
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXL 426
T+P +V G+ + V L PA GTGI++ + ++++AG+Q+ T + GST L
Sbjct: 84 TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGSTNPL 138
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +2
Query: 17 FLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 196
F ++V+ I V K T+ G+ R A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 197 LAKLSVLPV 223
AK +++ V
Sbjct: 98 EAKKNLIRV 106
Score = 39.5 bits (88), Expect = 0.058
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 411
TVP +V G G+ V + PA GTG+++ + ++++AG+ D Y + G
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLG 161
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1
Query: 328 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGKF 435
G+ +V+ VPKK+L+ AG++D +TS+RGST L F
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +2
Query: 38 DEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 217
+++L + K + G+R R A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 218 --PVRRG 232
PV G
Sbjct: 79 TVPVENG 85
Score = 39.5 bits (88), Expect = 0.058
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 414
T+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ + + GS
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
TVP V G G+ + ++PA RGTG+V+ K + ++AG D T GST
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
Score = 40.3 bits (90), Expect = 0.033
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +2
Query: 32 LNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 211
L + ++ + T+ G+R V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 212 VLPV 223
V+ V
Sbjct: 88 VIRV 91
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 44.4 bits (100), Expect = 0.002
Identities = 18/62 (29%), Positives = 39/62 (62%)
Frame = +2
Query: 38 DEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 217
+ V+++ V K + G++ + +A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 218 PV 223
V
Sbjct: 209 QV 210
Score = 37.5 bits (83), Expect = 0.23
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXL 426
K T P + G G+ V L PA GTG+++ + +L+MAGV++ GS L
Sbjct: 214 KYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNAL 271
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 43.2 bits (97), Expect = 0.005
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +2
Query: 38 DEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 190
+ ++KI V K T+ G++ +A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
Score = 32.7 bits (71), Expect = 6.6
Identities = 16/67 (23%), Positives = 34/67 (50%)
Frame = +1
Query: 226 KRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 405
K L+ K ++P V G G+ + + P+ G+G+++ + +L++AG+++
Sbjct: 84 KNLIDVPITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVIAKQ 143
Query: 406 RGSTXXL 426
GS L
Sbjct: 144 LGSDNLL 150
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 42.7 bits (96), Expect = 0.006
Identities = 18/62 (29%), Positives = 37/62 (59%)
Frame = +2
Query: 38 DEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 217
+ V+++ V K + G++ +A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 218 PV 223
V
Sbjct: 246 TV 247
Score = 35.5 bits (78), Expect = 0.94
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 390
T P + G G+ V L PA GTG+++ + +L+MAGV++
Sbjct: 254 TFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVEN 296
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 42.3 bits (95), Expect = 0.008
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 23 GPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 202
G L ++++ I V K + G+R A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 203 KLSVL--PVRRG 232
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 42.3 bits (95), Expect = 0.008
Identities = 25/69 (36%), Positives = 34/69 (49%)
Frame = +2
Query: 23 GPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 202
G L D V+ I V K + G+ A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 203 KLSVLPVRR 229
K + V R
Sbjct: 102 KKHMFSVPR 110
Score = 34.7 bits (76), Expect = 1.6
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 414
T+ V G + TV L PA GTG+++ + +++ AG+ D T + GS
Sbjct: 114 TITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGS 164
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 41.9 bits (94), Expect = 0.011
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 274 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 411
+V G+ G+ V L PAP+GTGI++ + ++++AG D YT G
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLG 184
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 41.5 bits (93), Expect = 0.014
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 38 DEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 211
D+++ I V K + G+R A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 212 VLPVRRG 232
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 40.7 bits (91), Expect = 0.025
Identities = 17/62 (27%), Positives = 37/62 (59%)
Frame = +2
Query: 38 DEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 217
+ V++I V K + G++ +A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 218 PV 223
V
Sbjct: 128 RV 129
Score = 39.5 bits (88), Expect = 0.058
Identities = 20/71 (28%), Positives = 39/71 (54%)
Frame = +1
Query: 214 STSPKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 393
S + K L+ K +++P ++G G+ V L PA GTG+++ + +L++AG+++
Sbjct: 120 SDARKALIRVPLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNV 179
Query: 394 YTSARGSTXXL 426
+ GS L
Sbjct: 180 LAKSLGSKSPL 190
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 39.9 bits (89), Expect = 0.044
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +2
Query: 38 DEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 217
+ V+ I V K + G+R A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 218 PV 223
V
Sbjct: 104 RV 105
Score = 35.1 bits (77), Expect = 1.2
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 414
T+ V G+ + V L PA GTG+++ + +L+ AGV D + GS
Sbjct: 111 TITHPVQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGS 161
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 39.5 bits (88), Expect = 0.058
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
T+P +V K G V L PA GTG+++ + +L++AGV+D + G++
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGAS 135
Score = 33.1 bits (72), Expect = 5.0
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 35 NDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIR 184
++ V+ I K + G+ A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 39.5 bits (88), Expect = 0.058
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 414
++P +V G+ G+ V LIPA GTGI++ + + + G+ D T + G+
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGT 140
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 38.7 bits (86), Expect = 0.10
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 414
TVP + K + V L PAP+G GI+++ + ++++AG D YT + GS
Sbjct: 159 TVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKSYGS 209
Score = 33.9 bits (74), Expect = 2.9
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 38 DEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 217
++++ I V + G+R A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 218 PV 223
V
Sbjct: 151 RV 152
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 38.3 bits (85), Expect = 0.13
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +2
Query: 38 DEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 217
+ V++I V K + G++ +A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 218 PV 223
V
Sbjct: 79 EV 80
Score = 32.3 bits (70), Expect = 8.7
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXL 426
K +++ G G V + PA GTG+++ + +L++AGV++ GS L
Sbjct: 84 KSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSNNPL 141
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 38.3 bits (85), Expect = 0.13
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 32 LNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 205
L ++++ I V K + G+R A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
Score = 35.9 bits (79), Expect = 0.71
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 414
++P +V G G+ V L PA GTG+++ + +L+ AGV + T GS
Sbjct: 85 SIPHQVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSNILTKCLGS 135
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.9 bits (84), Expect = 0.18
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 62 VQKQTRAGQRTRXKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 229
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 37.9 bits (84), Expect = 0.18
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 250 RKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
R+ T+ K G+ + + PAP GTGIV+ +K +M GV D + GS+
Sbjct: 77 REGRTIHHDCFSKLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGSS 132
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 36.7 bits (81), Expect = 0.41
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +2
Query: 32 LNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 211
L ++L V QTR G+ +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 212 VLPVRR 229
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 36.3 bits (80), Expect = 0.54
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 414
K T+P +V G V L PA GTG+++ + +L+ AGV++ T + GS
Sbjct: 137 KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKNVLTKSMGS 190
Score = 34.7 bits (76), Expect = 1.6
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 32 LNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIR 184
L ++V+ I K + G+R A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 36.3 bits (80), Expect = 0.54
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 62 VQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 229
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.5 bits (78), Expect = 0.94
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +2
Query: 29 SLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 208
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 209 SVLPVRR 229
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 35.1 bits (77), Expect = 1.2
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 101 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGSH--TPSLA 274
++ V IG + H G + +++VA A+RG + L V GYW + G ++A
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPGLRQVLRTVA 61
Query: 275 RSPASVVP 298
S +VVP
Sbjct: 62 YSDVTVVP 69
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 34.7 bits (76), Expect = 1.6
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -1
Query: 193 NSASNGSGDFLAALHTQTNMTVVVANGNKCLXT 95
NS ++ +FL T+TNMT+ V+N NKC T
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 34.7 bits (76), Expect = 1.6
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 259 HTVPCKVTGK-CGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 414
HT+ +V GK C ++ V ++PAP G GIV+ + + +AG+++ GS
Sbjct: 69 HTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKAKIHGS 120
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 34.7 bits (76), Expect = 1.6
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +1
Query: 250 RKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
R+ T+ V GK G+ + L AP+GTGI++ + + ++ G++D + G++
Sbjct: 77 REGRTIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKDIVAKSMGTS 132
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 34.3 bits (75), Expect = 2.2
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 32 LNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIR 184
L ++VL + K + G++ A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
Score = 32.3 bits (70), Expect = 8.7
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +1
Query: 226 KRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 405
K L+ + + ++P +V + L PA GTGIV+ + +L+MAGV++ +
Sbjct: 71 KNLITIESLEGDSIPHEVLVDQDGAQLLLKPAKPGTGIVAGSRIRLILEMAGVKNIVAKS 130
Query: 406 RGSTXXLGK 432
GS + +
Sbjct: 131 LGSNNPMNQ 139
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 33.9 bits (74), Expect = 2.9
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 29 SLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 208
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 209 SVLPVRR 229
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 33.9 bits (74), Expect = 2.9
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
T+P + G +V L PA GTG+ + + +L GV D ++GS+
Sbjct: 85 TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGVTDVLAKSKGSS 136
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 33.9 bits (74), Expect = 2.9
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +2
Query: 32 LNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 211
L ++++ + V K + G+ A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 212 VLPV 223
++ V
Sbjct: 81 MVRV 84
Score = 33.1 bits (72), Expect = 5.0
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 262 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 417
T+ V G+ G+ V + PA GTGI++ + + ++ GV + GST
Sbjct: 90 TLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCLGST 141
>UniRef50_A3Y6Q7 Cluster: Putative uncharacterized protein; n=1;
Marinomonas sp. MED121|Rep: Putative uncharacterized
protein - Marinomonas sp. MED121
Length = 612
Score = 33.5 bits (73), Expect = 3.8
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = -1
Query: 484 SEVGICLGNGSVCGFSKISQGXQLNHELTCSNPVHQPSEEAS*ELAQTQYQYHEGQES 311
SE G L S+ S+I+Q QLN + T +N ++ S+ A+ + + + + +GQES
Sbjct: 164 SESGDSLSENSLKAASEINQTGQLNSQETLNNAWNKGSKLATSSIEKAEKTFDQGQES 221
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 33.1 bits (72), Expect = 5.0
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 44 VLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 223
++ + V K + G+R V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 32.7 bits (71), Expect = 6.6
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +2
Query: 17 FLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 196
F G SL D+++ + + + QRT+ GH GL CS EVATAI+ I
Sbjct: 71 FPGESLKDDLMMASGLGSRLLSSQRTK-----------GHSGLSSMCSGEVATAIQVLGI 119
Query: 197 LAKL-SVLPVRRGYWGNKIGSHTPSL 271
+ L S P+ R GN G PS+
Sbjct: 120 TSYLGSPWPLCRE--GNMTGKSLPSV 143
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 32.7 bits (71), Expect = 6.6
Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = -1
Query: 79 TCLFLYR-HDLKNLIIQGRAEEEIND 5
TCLF R HDL +LI++G ++EEI D
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIAD 306
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 32.7 bits (71), Expect = 6.6
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 44 VLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 190
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q5K967 Cluster: Oligopeptide transporter, putative; n=5;
Dikarya|Rep: Oligopeptide transporter, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 797
Score = 32.7 bits (71), Expect = 6.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 152 KCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGSHTPSLARSPASVVP 298
+ + + TA+ II LS V+ +WGN +GS T +P VP
Sbjct: 737 QAAMDTGTALATIIIFFALSYNGVKLNWWGNTVGSDTDDAKGTPWLTVP 785
>UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 256
Score = 32.3 bits (70), Expect = 8.7
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 383 TPAI*RSFLGTGADTIPVPRGAGISRTVTEP 291
TP + RS G GA T+P RG+G+ T T P
Sbjct: 142 TPVLSRSLSGIGAVTMPNARGSGLLATFTAP 172
>UniRef50_Q00SQ1 Cluster: Kinesin; n=2; Ostreococcus|Rep: Kinesin -
Ostreococcus tauri
Length = 625
Score = 32.3 bits (70), Expect = 8.7
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 205 AVSSTSPKRLLG*QDRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 369
A + +R+L Q+R P VP G +++PAPR + V K+ L
Sbjct: 50 ATKNVDERRMLDGQERSPEIVPAGDAGSAAPSLKKVMPAPRAQSKIRVSVRKRPL 104
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,998,856
Number of Sequences: 1657284
Number of extensions: 13649167
Number of successful extensions: 35117
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 33697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35089
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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