Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--1000
(592 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 169 3e-42
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 167 7e-42
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 167 7e-42
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 167 7e-42
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 167 7e-42
AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-P... 31 1.5
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 169 bits (410), Expect = 3e-42
Identities = 97/171 (56%), Positives = 102/171 (59%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTR KAFVAIGDNNGHIGLGVKCSKEVATAI
Sbjct: 75 EIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 134
Query: 182 RGAIILAKLSVLPVRRGYWGNKIGS-HT-PSLARSPASVVP*QSG*FXXXXXXXXXXRQF 355
RGAIILAKLSV+PVRRGYWGNKIG HT P V +
Sbjct: 135 RGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRL--IPAPRGTGIVSAPV 192
Query: 356 LRSFFRWLVYRIATRQLVVQLXTLGNFXXXXXXXXXXXXXXLTPDLWRDIP 508
R TLGNF LTPDLW+++P
Sbjct: 193 PRKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMP 243
Score = 120 bits (288), Expect = 2e-27
Identities = 53/61 (86%), Positives = 57/61 (93%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGK 432
KPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVP+KLL MAG++DCYTSARGST LG
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTSARGSTGTLGN 218
Query: 433 F 435
F
Sbjct: 219 F 219
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 167 bits (407), Expect = 7e-42
Identities = 96/171 (56%), Positives = 102/171 (59%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTR KAFVAIGDNNGHIGLGVKCSKEVATAI
Sbjct: 75 EIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 134
Query: 182 RGAIILAKLSVLPVRRGYWGNKIGS-HT-PSLARSPASVVP*QSG*FXXXXXXXXXXRQF 355
RGAIILAKLSV+PVRRGYWGNKIG HT P V +
Sbjct: 135 RGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRL--IPAPRGTGIVSAPV 192
Query: 356 LRSFFRWLVYRIATRQLVVQLXTLGNFXXXXXXXXXXXXXXLTPDLWRDIP 508
+ TLGNF LTPDLW+++P
Sbjct: 193 PKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMP 243
Score = 121 bits (291), Expect = 8e-28
Identities = 54/61 (88%), Positives = 57/61 (93%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGK 432
KPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGST LG
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGN 218
Query: 433 F 435
F
Sbjct: 219 F 219
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 167 bits (407), Expect = 7e-42
Identities = 96/171 (56%), Positives = 102/171 (59%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTR KAFVAIGDNNGHIGLGVKCSKEVATAI
Sbjct: 75 EIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 134
Query: 182 RGAIILAKLSVLPVRRGYWGNKIGS-HT-PSLARSPASVVP*QSG*FXXXXXXXXXXRQF 355
RGAIILAKLSV+PVRRGYWGNKIG HT P V +
Sbjct: 135 RGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRL--IPAPRGTGIVSAPV 192
Query: 356 LRSFFRWLVYRIATRQLVVQLXTLGNFXXXXXXXXXXXXXXLTPDLWRDIP 508
+ TLGNF LTPDLW+++P
Sbjct: 193 PKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMP 243
Score = 121 bits (291), Expect = 8e-28
Identities = 54/61 (88%), Positives = 57/61 (93%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGK 432
KPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGST LG
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGN 218
Query: 433 F 435
F
Sbjct: 219 F 219
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 167 bits (407), Expect = 7e-42
Identities = 96/171 (56%), Positives = 102/171 (59%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTR KAFVAIGDNNGHIGLGVKCSKEVATAI
Sbjct: 75 EIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 134
Query: 182 RGAIILAKLSVLPVRRGYWGNKIGS-HT-PSLARSPASVVP*QSG*FXXXXXXXXXXRQF 355
RGAIILAKLSV+PVRRGYWGNKIG HT P V +
Sbjct: 135 RGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRL--IPAPRGTGIVSAPV 192
Query: 356 LRSFFRWLVYRIATRQLVVQLXTLGNFXXXXXXXXXXXXXXLTPDLWRDIP 508
+ TLGNF LTPDLW+++P
Sbjct: 193 PKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMP 243
Score = 121 bits (291), Expect = 8e-28
Identities = 54/61 (88%), Positives = 57/61 (93%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGK 432
KPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGST LG
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGN 218
Query: 433 F 435
F
Sbjct: 219 F 219
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 167 bits (407), Expect = 7e-42
Identities = 96/171 (56%), Positives = 102/171 (59%), Gaps = 2/171 (1%)
Frame = +2
Query: 2 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRXKAFVAIGDNNGHIGLGVKCSKEVATAI 181
EIIDFFLG SL DEVLKIMPVQKQTRAGQRTR KAFVAIGDNNGHIGLGVKCSKEVATAI
Sbjct: 75 EIIDFFLGSSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 134
Query: 182 RGAIILAKLSVLPVRRGYWGNKIGS-HT-PSLARSPASVVP*QSG*FXXXXXXXXXXRQF 355
RGAIILAKLSV+PVRRGYWGNKIG HT P V +
Sbjct: 135 RGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRL--IPAPRGTGIVSAPV 192
Query: 356 LRSFFRWLVYRIATRQLVVQLXTLGNFXXXXXXXXXXXXXXLTPDLWRDIP 508
+ TLGNF LTPDLW+++P
Sbjct: 193 PKKLLTMAGIEDCYTSARGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMP 243
Score = 121 bits (291), Expect = 8e-28
Identities = 54/61 (88%), Positives = 57/61 (93%)
Frame = +1
Query: 253 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTXXLGK 432
KPHTVPCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSARGST LG
Sbjct: 159 KPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGN 218
Query: 433 F 435
F
Sbjct: 219 F 219
>AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-PA
protein.
Length = 954
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 247 DRKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 378
++ PH+V K G G + + L+P G G+++ + K+L + A
Sbjct: 904 EQLPHSVAAKRNGNAGKLAL-LLPGASGAGVINEDLEKQLRERA 946
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,315,068
Number of Sequences: 53049
Number of extensions: 673038
Number of successful extensions: 1738
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1738
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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