Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0998
         (610 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41017-5|AAC48216.2|  495|Caenorhabditis elegans C.elegans homeo...    28   4.5  
AJ427855-1|CAD20808.1|  495|Caenorhabditis elegans CEH-21 protei...    28   4.5  
AF023470-1|AAB86814.1|  183|Caenorhabditis elegans CEH-21 protein.     28   4.5  
Z49936-5|CAE47467.1|  801|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z49936-1|CAA90182.1|  930|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AY834228-1|AAV91314.1|  589|Caenorhabditis elegans Toll and inte...    28   6.0  
AY834227-1|AAV91313.1|  984|Caenorhabditis elegans Toll and inte...    28   6.0  
AY834226-1|AAV91312.1|  931|Caenorhabditis elegans Toll and inte...    28   6.0  

>U41017-5|AAC48216.2|  495|Caenorhabditis elegans C.elegans homeobox
           protein 21 protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 455 VTQTILSRDPGSISSRCRMPTLWNLMCSNARNCT*CRENW 574
           + + IL+R  G++S   RMP  W++M  N R       NW
Sbjct: 316 LAEKILARSQGTLSDLLRMPKPWSVM-KNGRATFQRMSNW 354


>AJ427855-1|CAD20808.1|  495|Caenorhabditis elegans CEH-21 protein
           protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 455 VTQTILSRDPGSISSRCRMPTLWNLMCSNARNCT*CRENW 574
           + + IL+R  G++S   RMP  W++M  N R       NW
Sbjct: 316 LAEKILARSQGTLSDLLRMPKPWSVM-KNGRATFQRMSNW 354


>AF023470-1|AAB86814.1|  183|Caenorhabditis elegans CEH-21 protein.
          Length = 183

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 455 VTQTILSRDPGSISSRCRMPTLWNLMCSNARNCT*CRENW 574
           + + IL+R  G++S   RMP  W++M  N R       NW
Sbjct: 4   LAEKILARSQGTLSDLLRMPKPWSVM-KNGRATFQRMSNW 42


>Z49936-5|CAE47467.1|  801|Caenorhabditis elegans Hypothetical
           protein F13B10.1e protein.
          Length = 801

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -2

Query: 162 IRSSTTL*SWESIDTRARTVEAFTVGGKMAAPTRPVTTRLTTSGNR 25
           I   TT   W++ +T +RT  + ++GG    P  P    +T +G++
Sbjct: 735 ISRKTTQQRWQTTNTVSRTGPSRSIGGPRMEPPTPTFFSVTPTGSQ 780


>Z49936-1|CAA90182.1|  930|Caenorhabditis elegans Hypothetical protein
            F13B10.1a protein.
          Length = 930

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -2

Query: 162  IRSSTTL*SWESIDTRARTVEAFTVGGKMAAPTRPVTTRLTTSGNR 25
            I   TT   W++ +T +RT  + ++GG    P  P    +T +G++
Sbjct: 864  ISRKTTQQRWQTTNTVSRTGPSRSIGGPRMEPPTPTFFSVTPTGSQ 909


>AY834228-1|AAV91314.1|  589|Caenorhabditis elegans Toll and
           interleukin 1 receptordomain protein isoform f protein.
          Length = 589

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -2

Query: 162 IRSSTTL*SWESIDTRARTVEAFTVGGKMAAPTRPVTTRLTTSGNR 25
           I   TT   W++ +T +RT  + ++GG    P  P    +T +G++
Sbjct: 523 ISRKTTQQRWQTTNTVSRTGPSRSIGGPRMEPPTPTFFSVTPTGSQ 568


>AY834227-1|AAV91313.1|  984|Caenorhabditis elegans Toll and
            interleukin 1 receptordomain protein isoform c protein.
          Length = 984

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -2

Query: 162  IRSSTTL*SWESIDTRARTVEAFTVGGKMAAPTRPVTTRLTTSGNR 25
            I   TT   W++ +T +RT  + ++GG    P  P    +T +G++
Sbjct: 918  ISRKTTQQRWQTTNTVSRTGPSRSIGGPRMEPPTPTFFSVTPTGSQ 963


>AY834226-1|AAV91312.1|  931|Caenorhabditis elegans Toll and
            interleukin 1 receptordomain protein isoform a protein.
          Length = 931

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -2

Query: 162  IRSSTTL*SWESIDTRARTVEAFTVGGKMAAPTRPVTTRLTTSGNR 25
            I   TT   W++ +T +RT  + ++GG    P  P    +T +G++
Sbjct: 865  ISRKTTQQRWQTTNTVSRTGPSRSIGGPRMEPPTPTFFSVTPTGSQ 910


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,638,524
Number of Sequences: 27780
Number of extensions: 267653
Number of successful extensions: 521
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)