Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0996
(469 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 133 2e-30
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 103 2e-21
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 96 3e-19
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 88 8e-17
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 81 9e-15
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 81 9e-15
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 81 2e-14
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 72 5e-12
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 69 5e-11
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 69 5e-11
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 68 9e-11
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 62 8e-09
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 60 3e-08
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 59 4e-08
UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2; Tric... 59 4e-08
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 58 7e-08
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 57 2e-07
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 56 3e-07
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 49 4e-05
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 48 8e-05
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 47 2e-04
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati... 46 5e-04
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L... 45 7e-04
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;... 44 0.002
UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1; Tetr... 43 0.004
UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putati... 41 0.016
UniRef50_Q5GAS4 Cluster: Stc; n=16; Poaceae|Rep: Stc - Zea mays ... 38 0.11
UniRef50_Q8TQ10 Cluster: Putative uncharacterized protein; n=2; ... 38 0.14
UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26; Archa... 37 0.25
UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10; Archa... 35 0.77
UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5; Archae... 34 1.3
UniRef50_UPI0000F1E445 Cluster: PREDICTED: similar to pol polypr... 33 2.4
UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1; Guill... 33 2.4
UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic... 33 3.1
UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;... 33 3.1
UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal ... 33 4.1
UniRef50_Q9RZQ4 Cluster: Putative uncharacterized protein; n=1; ... 33 4.1
UniRef50_Q9RXR9 Cluster: Peptidyl-prolyl cis-trans isomerase; n=... 33 4.1
UniRef50_Q8UDY7 Cluster: Cyclopropane-fatty-acyl-phospholipid sy... 33 4.1
UniRef50_UPI000023E384 Cluster: hypothetical protein FG10943.1; ... 32 5.4
UniRef50_A1YKE3 Cluster: CCR4 associated factor-like protein; n=... 32 5.4
UniRef50_P10623 Cluster: 50S ribosomal protein L12P; n=7; Archae... 32 5.4
UniRef50_Q5ZTD7 Cluster: Expressed protein; n=4; Legionella pneu... 32 7.2
UniRef50_Q21UY7 Cluster: Putative uncharacterized protein precur... 32 7.2
UniRef50_Q6MAN0 Cluster: Serine/threonine-protein kinase pknD; n... 32 7.2
UniRef50_Q5A0A7 Cluster: Putative uncharacterized protein; n=2; ... 31 9.5
UniRef50_Q55RQ0 Cluster: Putative uncharacterized protein; n=2; ... 31 9.5
UniRef50_A5DY96 Cluster: Putative uncharacterized protein; n=1; ... 31 9.5
UniRef50_Q9P9G5 Cluster: Ribosomal protein L12; n=9; Archaea|Rep... 31 9.5
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 133 bits (321), Expect = 2e-30
Identities = 63/71 (88%), Positives = 69/71 (97%)
Frame = +3
Query: 42 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 221
M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 222 TNIGSGVGAAP 254
TNIGSGVGAAP
Sbjct: 61 TNIGSGVGAAP 71
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 103 bits (247), Expect = 2e-21
Identities = 57/83 (68%), Positives = 64/83 (77%), Gaps = 4/83 (4%)
Frame = +3
Query: 30 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 209
S++K+ + A +C YSALIL DDDVAVT EKISTI A VD+EPYWPGLF KALEGINV
Sbjct: 9 SQVKITAIA--SCAYSALILFDDDVAVTDEKISTI--QANVDIEPYWPGLFTKALEGINV 64
Query: 210 RDLITNIGSGV----GAAPPLVE 266
+DLITNIGSGV GAAP E
Sbjct: 65 KDLITNIGSGVETGGGAAPTAFE 87
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 96.3 bits (229), Expect = 3e-19
Identities = 44/71 (61%), Positives = 57/71 (80%)
Frame = +3
Query: 42 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 221
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 222 TNIGSGVGAAP 254
N+G+G G AP
Sbjct: 61 CNVGAG-GPAP 70
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 88.2 bits (209), Expect = 8e-17
Identities = 48/56 (85%), Positives = 50/56 (89%)
Frame = +3
Query: 69 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 236
VYSALILVDD VAVT EKISTILKAA +VEPYW LFAKALEGINV+DLITNIGS
Sbjct: 36 VYSALILVDD-VAVTDEKISTILKAA--NVEPYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 81.4 bits (192), Expect = 9e-15
Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +3
Query: 45 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 224
+S +ELAC Y+ALIL DD + +T E IS ++K A V+VE YWP LFAK E N+ DLI
Sbjct: 1 MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60
Query: 225 NIGS-GVGAAPPL 260
N+G+ G G A P+
Sbjct: 61 NVGAGGCGVARPV 73
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 81.4 bits (192), Expect = 9e-15
Identities = 38/71 (53%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDLI 221
+S AELA Y+ALIL D+ + +T +K+ ++ AA V ++EP W LFAKALEG +V+DL+
Sbjct: 1 MSAAELASSYAALILADEGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLL 60
Query: 222 TNIGSGVGAAP 254
N+GSG GAAP
Sbjct: 61 LNVGSGGGAAP 71
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 80.6 bits (190), Expect = 2e-14
Identities = 40/70 (57%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = +3
Query: 45 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVD-VEPYWPGLFAKALEGINVRDLI 221
+SK+ELACVY+AL+L DDD+ VT +KI+TILKAA + VE Y P LFA +L G NV+DL+
Sbjct: 1 MSKSELACVYAALMLADDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLL 60
Query: 222 TNIGSGVGAA 251
++GS +A
Sbjct: 61 MSMGSPAPSA 70
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 72.1 bits (169), Expect = 5e-12
Identities = 34/75 (45%), Positives = 52/75 (69%)
Frame = +3
Query: 30 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 209
S+L + EL CVYS+L+L DD + VT + I ++KAA D++P+ P LFA+AL+G ++
Sbjct: 7 SELTKEQREELMCVYSSLVLYDDGLDVTQDNILKLVKAAKGDMQPFTPMLFARALKGKDL 66
Query: 210 RDLITNIGSGVGAAP 254
L++ +GSG AAP
Sbjct: 67 GSLLSAVGSGAAAAP 81
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 68.9 bits (161), Expect = 5e-11
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +3
Query: 21 LARSKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEG 200
++ ++L EL C Y+AL+L D V VT E I I+ AA VEPY+PGLFA+AL
Sbjct: 4 VSMNELPQSQVQELICSYAALVLSDGGVPVTSENIKKIISAAGGSVEPYFPGLFAQALST 63
Query: 201 INVRDLITNIGSGVGAAP 254
NV D++ G+ A P
Sbjct: 64 TNVSDIVAGCGAASVAVP 81
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 68.9 bits (161), Expect = 5e-11
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +3
Query: 144 AAVDVEPYWPGLFAKALEGINVRDLITNIGSGVG 245
A VD+EPYWP LFAKALEGINV+DLITNIGSGVG
Sbjct: 6 ANVDIEPYWPALFAKALEGINVKDLITNIGSGVG 39
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 68.1 bits (159), Expect = 9e-11
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +3
Query: 42 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAV-DVEPYWPGLFAKALEGINVRDL 218
M + E A Y+ALIL DD +T EK+ +L AA + DVEP W LFAKALEG +V+D+
Sbjct: 1 MPTDPERAVSYAALILADDATPITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDI 60
Query: 219 ITNIGSGVG 245
+T + S G
Sbjct: 61 LTEVASAAG 69
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 61.7 bits (143), Expect = 8e-09
Identities = 26/49 (53%), Positives = 37/49 (75%)
Frame = +3
Query: 57 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGI 203
+ C+YSA IL +D V V +KI+T +KAA ++VEP+WPGLFAK+L +
Sbjct: 19 KFTCIYSAHILHNDKVMVMEDKINTPIKAAGINVEPFWPGLFAKSLNNV 67
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 59.7 bits (138), Expect = 3e-08
Identities = 29/73 (39%), Positives = 46/73 (63%)
Frame = +3
Query: 30 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINV 209
++L K EL C Y+ALIL ++ +++T E I ++K + V PY P LF KAL+G ++
Sbjct: 7 AELPECEKQELLCTYAALILHEEKMSITNENIVKLIKKSNNTVLPYLPMLFEKALKGKDI 66
Query: 210 RDLITNIGSGVGA 248
L++N+ G GA
Sbjct: 67 EGLLSNLSVGGGA 79
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 59.3 bits (137), Expect = 4e-08
Identities = 29/68 (42%), Positives = 41/68 (60%)
Frame = +3
Query: 57 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 236
E ACV +A+IL D++ T + +I AA V V+ W LFA LEG NV++L+T +GS
Sbjct: 5 ETACVLAAIILADENQEPTAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLTTLGS 64
Query: 237 GVGAAPPL 260
A P+
Sbjct: 65 ASAAPAPV 72
>UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 104
Score = 59.3 bits (137), Expect = 4e-08
Identities = 26/67 (38%), Positives = 42/67 (62%)
Frame = +3
Query: 54 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIG 233
AELACVY+ALIL D + + + ++ ++ A+ + ++ +W L+A + NV DLI N+
Sbjct: 3 AELACVYAALILNDGEKEINADSLAKVVAASGLKLDQFWVNLYADYFKKANVADLIKNVS 62
Query: 234 SGVGAAP 254
G AAP
Sbjct: 63 LGGAAAP 69
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 58.4 bits (135), Expect = 7e-08
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +3
Query: 54 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI-TNI 230
+E AC Y+ALIL +D+ + K++ I+KAA + VEP W +F KAL+G V DL+ N
Sbjct: 17 SEAACTYAALILYEDNQEINAAKLAQIIKAANLRVEPIWTKVFEKALKGKKVGDLLHGNS 76
Query: 231 GSGVGA 248
GS A
Sbjct: 77 GSAPAA 82
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 56.8 bits (131), Expect = 2e-07
Identities = 28/65 (43%), Positives = 40/65 (61%)
Frame = +3
Query: 57 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 236
E A Y+ALIL D +V +T EK+ ++ A V+VE W LFAKALEG ++++ N +
Sbjct: 4 ESALSYAALILADAEVEITSEKLLALVTKANVEVEGIWADLFAKALEGKDLKEFFFNFSA 63
Query: 237 GVGAA 251
AA
Sbjct: 64 APAAA 68
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 56.4 bits (130), Expect = 3e-07
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +3
Query: 57 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGS 236
ELA +AL++ + +T E I+T+L A + VE +WP + AKAL N+ DLI + GS
Sbjct: 9 ELAVALAALLIHEAGKEITAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLIMDAGS 68
Query: 237 GVGAAPPLVE 266
AA P +
Sbjct: 69 APVAAAPAAQ 78
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 49.2 bits (112), Expect = 4e-05
Identities = 22/66 (33%), Positives = 39/66 (59%)
Frame = +3
Query: 51 KAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 230
K ELA +Y +IL + +T E I+ +L A+ ++V PYWP +FA+ ++G + ++ +
Sbjct: 119 KQELAIMYCGMILNEVKADITEENINKLLSASKIEVAPYWPKMFAEIVKGKDFDKIMEDS 178
Query: 231 GSGVGA 248
GA
Sbjct: 179 AGAPGA 184
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 48.4 bits (110), Expect = 8e-05
Identities = 26/71 (36%), Positives = 39/71 (54%)
Frame = +3
Query: 42 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 221
M SK +LAC Y+ALIL D + + + KAA VDV FA L+ +++ D++
Sbjct: 1 MSSKQQLACTYAALILADSG-KTDMDSLLKVTKAAGVDVSKGMASAFASILKNVDINDVL 59
Query: 222 TNIGSGVGAAP 254
+ + G G AP
Sbjct: 60 SKVSFG-GVAP 69
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 47.2 bits (107), Expect = 2e-04
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Frame = +3
Query: 72 YSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT---NIG--S 236
++A IL D + +T + + TI KAA +V+ W ++AKALEG +++++++ N G +
Sbjct: 8 FAAFILADAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILSGFHNAGPVA 67
Query: 237 GVGAA 251
G GAA
Sbjct: 68 GAGAA 72
>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
P2, putative - Leishmania major
Length = 111
Score = 45.6 bits (103), Expect = 5e-04
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = +3
Query: 45 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 221
+S LAC Y+AL+L D + + E I+ +KAA V++ P P +FA+ LE +V L+
Sbjct: 1 MSAETLACTYAALMLSDAGLPTSAENIAAAVKAAGVEMRPTLPIIFARFLEKKSVETLM 59
>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
Leishmania|Rep: 60S acidic ribosomal protein P1 -
Leishmania peruviana
Length = 107
Score = 45.2 bits (102), Expect = 7e-04
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +3
Query: 60 LACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 221
LAC Y+AL+L D + + E I+ +KAA V V P P +FA+ LE +V L+
Sbjct: 6 LACTYAALMLSDAGLPTSAENIAAAVKAAGVSVRPTMPIIFARFLEKKSVEALM 59
>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 108
Score = 44.0 bits (99), Expect = 0.002
Identities = 25/69 (36%), Positives = 37/69 (53%)
Frame = +3
Query: 45 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 224
++ A+LAC Y+ALIL + I + KAA V+V FA AL +NV +++
Sbjct: 1 MTTAQLACTYAALILSASG-KTDADSICAVTKAAGVEVSHGMAAAFANALAAVNVNEVLG 59
Query: 225 NIGSGVGAA 251
+I G AA
Sbjct: 60 SISFGGAAA 68
>UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 271
Score = 42.7 bits (96), Expect = 0.004
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 ACVYSALILVDDDVAVTGEKISTIL-KAAAVDVEPYWPGLFAKALEGINVRDLITNIG-S 236
AC Y+ L+L DD A+T + I+ +L KA +VE Y P L+ + + I N G S
Sbjct: 8 ACTYAVLLLSDDGQAITVDNINKVLTKAKVQNVEKYLPKLYVSNITPAVIASTIANGGSS 67
Query: 237 GVGAAP 254
G+AP
Sbjct: 68 SSGSAP 73
>UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P1, putative - Trichomonas vaginalis G3
Length = 44
Score = 40.7 bits (91), Expect = 0.016
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 57 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYW 170
ELACVY+ALIL D D +T + + I+ A+ + + +W
Sbjct: 4 ELACVYAALILHDGDKEITADALQKIIDASGLQTDKFW 41
>UniRef50_Q5GAS4 Cluster: Stc; n=16; Poaceae|Rep: Stc - Zea mays
(Maize)
Length = 665
Score = 37.9 bits (84), Expect = 0.11
Identities = 26/75 (34%), Positives = 36/75 (48%)
Frame = -1
Query: 298 RSAGCSSSGWHSTSGGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIF 119
RS+G S ++GG P P P +V+ P K + P G TS AA+ V
Sbjct: 49 RSSGGRRSAVDPSAGGPPPPPPP-VVMAGAVASPGKRIP--PSPIGCTSRAASDVAVSAS 105
Query: 118 SPVTATSSSTRMRAE 74
+ V AT+SS+R E
Sbjct: 106 ATVAATASSSRQAKE 120
>UniRef50_Q8TQ10 Cluster: Putative uncharacterized protein; n=2;
Methanosarcina acetivorans|Rep: Putative uncharacterized
protein - Methanosarcina acetivorans
Length = 394
Score = 37.5 bits (83), Expect = 0.14
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = -1
Query: 295 SAGCSSSGWHSTSGGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFS 116
S+G SSSG S+ GG +PEP + +R L A ++ T A K VE +
Sbjct: 138 SSGKSSSGGSSSGGGGGGSPEPASNVEARELSQQYVTAGSRARFNFTEDATCVKYVEFDA 197
Query: 115 PVTATSSST 89
T +T
Sbjct: 198 KKTLGKITT 206
>UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26;
Archaea|Rep: 50S ribosomal protein L12P - Archaeoglobus
fulgidus
Length = 106
Score = 36.7 bits (81), Expect = 0.25
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITN--IGSGV 242
VY+AL+L +T + + +L+AA V+V+ ALEG+N+ + I + V
Sbjct: 4 VYAALLLHSAGKEITEDNVKAVLEAAGVEVDEARVKALVAALEGVNIDEAIQKAAMPMAV 63
Query: 243 GAAP 254
AAP
Sbjct: 64 AAAP 67
>UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10;
Archaea|Rep: 50S ribosomal protein L12P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 115
Score = 35.1 bits (77), Expect = 0.77
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 69 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 221
VY+ALIL + D + + ++ +L AA VDVE ALE +++ + +
Sbjct: 4 VYAALILNEADEEINEDNLTDVLDAAGVDVEESRVKALVAALEDVDIEEAV 54
>UniRef50_O57705 Cluster: 50S ribosomal protein L12P; n=5;
Archaea|Rep: 50S ribosomal protein L12P - Pyrococcus
horikoshii
Length = 108
Score = 34.3 bits (75), Expect = 1.3
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +3
Query: 69 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGA 248
VY+AL+L + E + +L+AA V+ E ALEG+N+ ++I V
Sbjct: 4 VYAALLLHSVGKEINEENLKAVLQAAGVEPEEARIKALVAALEGVNIDEVIEKAAMPVAV 63
Query: 249 A 251
A
Sbjct: 64 A 64
>UniRef50_UPI0000F1E445 Cluster: PREDICTED: similar to pol
polyprotein; n=16; Danio rerio|Rep: PREDICTED: similar
to pol polyprotein - Danio rerio
Length = 1879
Score = 33.5 bits (73), Expect = 2.4
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = -1
Query: 298 RSAGCSSSGWHSTSGGAAPTPEPMLVIRSRTLMPSKAL-ANRPGQYGSTSTAAAFKM--V 128
RS+G S++ AAP PEPM V R R K L R G + +S A+ + + +
Sbjct: 239 RSSGRVEGTLSSSTFPAAPDPEPMQVGRLRLTPQEKQLRLAREGNFMDSSVASQWGIPAI 298
Query: 127 EIFSPVTATSSSTRMRAE*THANSAFDTIFS 35
+ P+ A S + A +HA + + S
Sbjct: 299 PLPDPIPARSLDGTLIATISHATPSVSLVIS 329
>UniRef50_Q98SB2 Cluster: Acidic ribosomal protein P1; n=1;
Guillardia theta|Rep: Acidic ribosomal protein P1 -
Guillardia theta (Cryptomonas phi)
Length = 104
Score = 33.5 bits (73), Expect = 2.4
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +3
Query: 60 LACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRD 215
++C+ S LIL ++ + +T + IS +LK + +VE Y+ F + ++ ++
Sbjct: 10 ISCILSILILKENKIKITKDLISLVLKTSNNNVEDYFLSYFERISASLDEKE 61
>UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4; n=3;
Euarchontoglires|Rep: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4 - Mus musculus
Length = 88
Score = 33.1 bits (72), Expect = 3.1
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 42 MVSKAELACVYSALILVDDD 101
M S +ELAC+YSALIL +DD
Sbjct: 1 MASASELACIYSALILHEDD 20
>UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;
n=16; Burkholderiaceae|Rep: Transcriptional regulator,
AraC family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 352
Score = 33.1 bits (72), Expect = 3.1
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +3
Query: 84 ILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNI 230
+L + VT E+ ST+ + A+D++ PG+F++ L G ++ L ++
Sbjct: 58 LLGEPHARVTEEQFSTLYRTLAIDLDDEMPGIFSRPLRGGTLKYLCLSL 106
>UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal
protein P1; n=3; Eutheria|Rep: PREDICTED: similar to
ribosomal protein P1 - Equus caballus
Length = 125
Score = 32.7 bits (71), Expect = 4.1
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 60 LACVYSALILVDDDVAVT 113
LAC+YSALIL DD+V VT
Sbjct: 43 LACIYSALILHDDEVTVT 60
>UniRef50_Q9RZQ4 Cluster: Putative uncharacterized protein; n=1;
Deinococcus radiodurans|Rep: Putative uncharacterized
protein - Deinococcus radiodurans
Length = 474
Score = 32.7 bits (71), Expect = 4.1
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -1
Query: 271 WHSTSGGAAPTPEPML-VIRSRTLMPSKALANRPGQYGSTSTAAAFKMV 128
W +GG P P L V+R R + +ALA R + G + T AAF V
Sbjct: 249 WGGDAGGLKPADVPDLQVLRERHRLTDEALARRAQELGVSQTWAAFLRV 297
>UniRef50_Q9RXR9 Cluster: Peptidyl-prolyl cis-trans isomerase; n=2;
Deinococcus|Rep: Peptidyl-prolyl cis-trans isomerase -
Deinococcus radiodurans
Length = 193
Score = 32.7 bits (71), Expect = 4.1
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 177 LFAKALEGINVRDLITNIGSGVGAAPPLVE 266
+F K +EG++V D IT I G+G P ++E
Sbjct: 157 VFGKVVEGLDVLDRITRIQPGMGGTPDVIE 186
>UniRef50_Q8UDY7 Cluster: Cyclopropane-fatty-acyl-phospholipid
synthase; n=1; Agrobacterium tumefaciens str. C58|Rep:
Cyclopropane-fatty-acyl-phospholipid synthase -
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Length = 410
Score = 32.7 bits (71), Expect = 4.1
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -3
Query: 221 DQVTDIDAFQGFGEQTWPIWLYIYSRRFQDGGNFLTSYGNIIINQDESRVNT 66
D + ++ F+ GE WP + + R + GG + II+ DESR +T
Sbjct: 261 DNIVSVEMFEAVGESYWPSYFEMLKRCLKPGGRAVLQ----IISIDESRFDT 308
>UniRef50_UPI000023E384 Cluster: hypothetical protein FG10943.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10943.1 - Gibberella zeae PH-1
Length = 1258
Score = 32.3 bits (70), Expect = 5.4
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 295 SAGCSSSGWHST-SGGAAPTPEPMLVIRSRTLMPSKALANRPGQYGS-TSTAAA 140
S+G ++SGW+ST S G TP P L + +PS L P S TST +
Sbjct: 376 SSGTTTSGWNSTTSRGNGTTPTPSLSNDTLVPLPSDTLPTTPVTTNSGTSTGGS 429
>UniRef50_A1YKE3 Cluster: CCR4 associated factor-like protein; n=1;
Brachypodium sylvaticum|Rep: CCR4 associated factor-like
protein - Brachypodium sylvaticum (False brome)
Length = 291
Score = 32.3 bits (70), Expect = 5.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 295 SAGCSSSGWHSTSGGAAPTPEPMLVIRSRTLMPSKALANRP 173
SA C S WHS + GA PTP + + P+ RP
Sbjct: 157 SATCCSWAWHSWAPGAGPTPSSGSSTSAASTRPAATRTRRP 197
>UniRef50_P10623 Cluster: 50S ribosomal protein L12P; n=7;
Archaea|Rep: 50S ribosomal protein L12P - Methanococcus
vannielii
Length = 99
Score = 32.3 bits (70), Expect = 5.4
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 69 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIG-SGVG 245
+Y+AL+L + VT E + +L A ++ ALEG+++ + I + V
Sbjct: 4 IYAALLLNSANKEVTEEAVKAVLVAGGIEANDARVKALVAALEGVDIAEAIAKAAIAPVA 63
Query: 246 AAPPL 260
AA P+
Sbjct: 64 AAAPV 68
>UniRef50_Q5ZTD7 Cluster: Expressed protein; n=4; Legionella
pneumophila|Rep: Expressed protein - Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1
/ATCC 33152 / DSM 7513)
Length = 509
Score = 31.9 bits (69), Expect = 7.2
Identities = 12/53 (22%), Positives = 30/53 (56%)
Frame = +3
Query: 12 LRQLARSKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYW 170
L+ + + + S +L Y +L + ++TG+++ + ++A +++EPYW
Sbjct: 374 LKDIVKCTGYLNSSPKLEFCYKTQLLKLETCSITGKELQSAVQATLINLEPYW 426
>UniRef50_Q21UY7 Cluster: Putative uncharacterized protein
precursor; n=1; Rhodoferax ferrireducens T118|Rep:
Putative uncharacterized protein precursor - Rhodoferax
ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
Length = 451
Score = 31.9 bits (69), Expect = 7.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -1
Query: 292 AGCSSSGWHSTSGGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTA 146
A S +G H+ SG P V +++ MP ALANR G +T+ +
Sbjct: 222 ANASLTGEHALSGEGLPASLKFAVGQAQDFMPKLALANRGGGASATNVS 270
>UniRef50_Q6MAN0 Cluster: Serine/threonine-protein kinase pknD; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Serine/threonine-protein kinase pknD - Protochlamydia
amoebophila (strain UWE25)
Length = 982
Score = 31.9 bits (69), Expect = 7.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 167 IWLYIYSRRFQDGGNFLTSYGNIIINQDES 78
+W Y+ + +QD GN L +Y +N+D S
Sbjct: 858 VWAYLLDKNWQDAGNLLYTYSVETLNKDSS 887
>UniRef50_Q5A0A7 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 116
Score = 31.5 bits (68), Expect = 9.5
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -1
Query: 214 SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRMRA 77
S +PS ALA Q ST AA M FS V + S+S +++A
Sbjct: 47 SLKFLPSTALAKTSAQTWSTLAPAALVMANNFSEVISCSASAKIKA 92
>UniRef50_Q55RQ0 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 418
Score = 31.5 bits (68), Expect = 9.5
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -1
Query: 274 GWHSTSGGAAPTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEI 122
G +T+G + PTP PM + T + S A+ + + S+ A+ FK +++
Sbjct: 210 GSSATTGASTPTPPPMPGYAADTSILSPAVLSPSSSFPSSPNASEFKSIDM 260
>UniRef50_A5DY96 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 504
Score = 31.5 bits (68), Expect = 9.5
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -2
Query: 195 PRLWRTDLANMALHLQPPLSRWWKFSHQLRQHHHQPG*EQSKHMLIQLL-TPFLVLNVQV 19
P LW + + + L Q +S W H HHHQ +Q + LL +P L+L+ Q
Sbjct: 225 PSLWNSPTSALLL-AQDEIS--WNPLHHHHHHHHQQQQQQQRFTYEGLLASPPLLLSPQY 281
Query: 18 AVGLSS 1
VG+ S
Sbjct: 282 DVGIGS 287
>UniRef50_Q9P9G5 Cluster: Ribosomal protein L12; n=9; Archaea|Rep:
Ribosomal protein L12 - Methanococcoides burtonii
Length = 100
Score = 31.5 bits (68), Expect = 9.5
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 69 VYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLITNIGSGVGA 248
+Y+AL+L + +T E +S +L AA +V ALE +++ + + A
Sbjct: 4 IYAALLLHNAGKDITEESVSAVLSAAGTEVNESRAKALVAALEDVDIEEAMATAAFAPAA 63
Query: 249 A 251
A
Sbjct: 64 A 64
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,578,132
Number of Sequences: 1657284
Number of extensions: 6693766
Number of successful extensions: 23034
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 21747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22996
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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