Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0992
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 31 0.95
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 29 3.8
Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 28 5.1
Z93393-15|CAE54926.1| 347|Caenorhabditis elegans Hypothetical p... 28 6.7
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 28 6.7
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 28 6.7
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 28 6.7
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 28 6.7
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 27 8.9
Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical pr... 27 8.9
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 27 8.9
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 27 8.9
U28741-2|AAA68326.2| 377|Caenorhabditis elegans Hypothetical pr... 27 8.9
U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3
Query: 207 PAHSGRRATSTPTPARGPALRASAGSASTPRHPGG 103
P G+R+ TP PA P + AG P GG
Sbjct: 190 PGQGGQRSRGTPGPAGAPGPQGPAGGPGQPGQSGG 224
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 207 PAHSGRRATSTPTPARGPALRASAGSASTPRHPGG 103
P G+R+ TP P+ P + AG P GG
Sbjct: 190 PGQGGQRSRGTPGPSGAPGPQGPAGGPGQPGQSGG 224
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 186 ATSTPTPARGPALRASAGSASTPRHPG 106
+T+T TP GP + A+ + +TP PG
Sbjct: 2026 STTTTTPGTGPTVTAAQTTTTTPSTPG 2052
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 186 ATSTPTPARGPALRASAGSASTPRHPG 106
+T+T TP GP + A+ + +TP PG
Sbjct: 2026 STTTTTPGTGPTVTAAQTTTTTPSTPG 2052
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 186 ATSTPTPARGPALRASAGSASTPRHPG 106
+T+T TP GP + A+ + +TP PG
Sbjct: 2026 STTTTTPGTGPTVTAAQTTTTTPSTPG 2052
>Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical
protein C50B6.4 protein.
Length = 291
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -3
Query: 207 PAHSGRRATSTPTPARGPALRASAGSASTPRHPGG 103
P G+R+T TP A P AG P GG
Sbjct: 192 PGQDGQRSTGTPGAAGAPGPAGPAGQDGQPGSDGG 226
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -3
Query: 207 PAHSGRRATSTPTPARGPALRASA-GSASTPRHPG 106
P H G+ + P RGPA A A G P +PG
Sbjct: 158 PGHPGQGGSQGPAGPRGPAGDAGAPGQVGAPGNPG 192
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3
Query: 207 PAHSGRRATSTPTPARGPALRASAGSASTPRHPGG 103
P G+R+ P P+ P AG P H GG
Sbjct: 193 PGRGGQRSRGLPGPSGRPGPPGPAGGPGQPGHSGG 227
>Z93393-15|CAE54926.1| 347|Caenorhabditis elegans Hypothetical
protein Y48E1B.16 protein.
Length = 347
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Frame = +3
Query: 114 DVGSRRSLQTPSTPAPELESEYWSRDAQSELGER--AWYDGSSGYARNVSCSSETACPWP 287
++ SR+ Q P+ P P + W R E+ A + +V P P
Sbjct: 19 EIESRKVTQKPAAPPPPKNDKSWVRSKIDSAKEKYHAGKEKLKTKISDVKSKLRGPAPTP 78
Query: 288 HSRPPAR 308
RPPA+
Sbjct: 79 QPRPPAQ 85
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 27.9 bits (59), Expect = 6.7
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = -2
Query: 220 QARSPSSLWASRDQYSDSSSGAGVE-GVCRERLDPT----SSRW*PSLSNPY-RRPQEPA 59
++RSPS SRD+ D SS + R R P+ SS W S SN + RR + +
Sbjct: 46 RSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHW--SSSNRHSRRRRSRS 103
Query: 58 ASSERSVNKRTMSAESN 8
S ER N R SN
Sbjct: 104 YSRERDRNSRRDDRRSN 120
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 27.9 bits (59), Expect = 6.7
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = -2
Query: 220 QARSPSSLWASRDQYSDSSSGAGVE-GVCRERLDPT----SSRW*PSLSNPY-RRPQEPA 59
++RSPS SRD+ D SS + R R P+ SS W S SN + RR + +
Sbjct: 74 RSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHW--SSSNRHSRRRRSRS 131
Query: 58 ASSERSVNKRTMSAESN 8
S ER N R SN
Sbjct: 132 YSRERDRNSRRDDRRSN 148
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 27.9 bits (59), Expect = 6.7
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = -2
Query: 220 QARSPSSLWASRDQYSDSSSGAGVE-GVCRERLDPT----SSRW*PSLSNPY-RRPQEPA 59
++RSPS SRD+ D SS + R R P+ SS W S SN + RR + +
Sbjct: 132 RSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHW--SSSNRHSRRRRSRS 189
Query: 58 ASSERSVNKRTMSAESN 8
S ER N R SN
Sbjct: 190 YSRERDRNSRRDDRRSN 206
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 27.9 bits (59), Expect = 6.7
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = -2
Query: 220 QARSPSSLWASRDQYSDSSSGAGVE-GVCRERLDPT----SSRW*PSLSNPY-RRPQEPA 59
++RSPS SRD+ D SS + R R P+ SS W S SN + RR + +
Sbjct: 133 RSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHW--SSSNRHSRRRRSRS 190
Query: 58 ASSERSVNKRTMSAESN 8
S ER N R SN
Sbjct: 191 YSRERDRNSRRDDRRSN 207
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 195 QSELGERAWYDGSSGYARNVSCSSET 272
Q+ + E+ WYDG G +RN+ +T
Sbjct: 351 QTRMCEQFWYDGCRGRSRNIFSEYDT 376
>Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical
protein ZK669.2 protein.
Length = 264
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 153 PAPELESEYWSRDAQSELGERAWYDGSSGYARNVSCSSETACPW 284
P P+L+ + +R AQS+LG + GY + S PW
Sbjct: 184 PRPDLDENFMARCAQSQLGAKLMM--QHGYRQKEVASELDWVPW 225
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 195 QSELGERAWYDGSSGYARNVSCSSET 272
Q+ + E+ WYDG G +RN+ +T
Sbjct: 351 QTRMCEQFWYDGCRGRSRNIFSEYDT 376
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 195 QSELGERAWYDGSSGYARNVSCSSET 272
Q+ + E+ WYDG G +RN+ +T
Sbjct: 351 QTRMCEQFWYDGCRGRSRNIFSEYDT 376
>U28741-2|AAA68326.2| 377|Caenorhabditis elegans Hypothetical
protein F35D2.2 protein.
Length = 377
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 351 NRDSSPVCPRRWPSSVRAAVSVATDMPSPRNM 256
+RD + PRRW SV+ V + M RNM
Sbjct: 275 HRDPALRIPRRWTRSVQEPVEIQKPMMRMRNM 306
>U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical
protein ZK418.6 protein.
Length = 825
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +3
Query: 180 WSRDAQSELG-ERAWYDGSSGYARNVSCSSETACPWPHSRPPARCSASAGDRLERSP 347
W +D G E+ ++R + + C P RP C AG+ L R P
Sbjct: 411 WGKDRLLSHGREKGTLGHQFFFSRPRDITITSRCQRPPERPSTSCKLEAGENLRRRP 467
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,365,394
Number of Sequences: 27780
Number of extensions: 260109
Number of successful extensions: 1055
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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