BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0991
(591 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant r... 23 9.8
AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant r... 23 9.8
>AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant
receptor Or5 protein.
Length = 391
Score = 22.6 bits (46), Expect = 9.8
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 483 HTGLRSRDYNYGIPVIISARIMLIYFVKNKILFLF 587
HT + DY+ +++ ML YF K+L +F
Sbjct: 176 HTRVSLVDYSIFTAIMLPTIFMLAYFGGLKLLTIF 210
>AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant
receptor Or4 protein.
Length = 397
Score = 22.6 bits (46), Expect = 9.8
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 423 ETFFFF*LNSLAKRCSEFAGHTGLRSRDYNYGIPVIISARIML 551
ETF + L + + H +R YNY I S R+ML
Sbjct: 310 ETFLYCLLGTRLATQQQLLEHALYATRWYNYPIAFRSSIRMML 352
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,346
Number of Sequences: 2352
Number of extensions: 8422
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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