Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0991
         (591 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g37020.1 68417.m05244 expressed protein                             27   9.4  
At1g53700.1 68414.m06110 protein kinase, putative similar to cuc...    27   9.4  

>At4g37020.1 68417.m05244 expressed protein
          Length = 212

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 14/58 (24%), Positives = 27/58 (46%)
 Frame = +1

Query: 235 SSHFVIVTDVYLI*YKLNYPTSCNLILSSFQMTAL*NKLTRLVNLCIRYSHDIVNCVI 408
           +SH V+VTDV L        +    +L ++++       TR +  C+     ++N V+
Sbjct: 126 TSHLVVVTDVCLPLLSSGESSLSARVLINYELPTKKETYTRRITTCLASGGIVINMVV 183


>At1g53700.1 68414.m06110 protein kinase, putative similar to
           cucumber protein kinase CsPK3 [Cucumis sativus]
           gi|7416109|dbj|BAA93704
          Length = 476

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = +3

Query: 183 DYTVLMREDDLCFVSDLIESFRNR 254
           D  +++ + DLCF +D++ +FR+R
Sbjct: 230 DGHIMLSDFDLCFKADVVPTFRSR 253


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,971,372
Number of Sequences: 28952
Number of extensions: 165810
Number of successful extensions: 238
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1171109464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)