Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0987
(731 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56450.1 68418.m07046 mitochondrial substrate carrier family ... 33 0.20
At1g18640.2 68414.m02324 3-phosphoserine phosphatase (PSP) nearl... 32 0.45
At1g18640.1 68414.m02323 3-phosphoserine phosphatase (PSP) nearl... 32 0.45
At1g30450.3 68414.m03722 cation-chloride cotransporter, putative... 30 1.4
At1g30450.2 68414.m03721 cation-chloride cotransporter, putative... 30 1.4
At1g30450.1 68414.m03720 cation-chloride cotransporter, putative... 30 1.4
At4g11530.1 68417.m01850 protein kinase family protein contains ... 30 1.8
At5g05700.1 68418.m00627 arginine-tRNA-protein transferase 1 / a... 28 5.6
At4g04870.1 68417.m00709 CDP-alcohol phosphatidyltransferase fam... 28 5.6
At1g02230.1 68414.m00161 no apical meristem (NAM) family protein... 28 7.3
At5g20480.1 68418.m02434 leucine-rich repeat transmembrane prote... 27 9.7
At4g33600.1 68417.m04773 expressed protein 27 9.7
>At5g56450.1 68418.m07046 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 330
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -1
Query: 698 LFPKDTMPTSAFWKKAGHPSQYCRSRGHQPGP---NRRRICYQSRRDHDPCTVPCSFLCW 528
+F +DT P A WK+ G S G P RRRI QS +H + CW
Sbjct: 228 IFSEDTKPELALWKRWGLAQAVTTSAGLASYPLDTVRRRIMMQSGMEHP--MYRSTLDCW 285
Query: 527 SQ*VRALEVAVRYTAALN 474
+ R+ +A Y AL+
Sbjct: 286 KKIYRSEGLASFYRGALS 303
>At1g18640.2 68414.m02324 3-phosphoserine phosphatase (PSP) nearly
identical to 3-phosphoserine phosphatase GI:3759177 from
[Arabidopsis thaliana]
Length = 295
Score = 31.9 bits (69), Expect = 0.45
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -1
Query: 443 NTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILV 339
+TLG+ ++ + +LD+W V+ +C+ D+ + V
Sbjct: 62 STLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCV 96
>At1g18640.1 68414.m02323 3-phosphoserine phosphatase (PSP) nearly
identical to 3-phosphoserine phosphatase GI:3759177 from
[Arabidopsis thaliana]
Length = 295
Score = 31.9 bits (69), Expect = 0.45
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -1
Query: 443 NTLGYYDTLLDNSTLLDVWAEVDGMCYSYDAHILV 339
+TLG+ ++ + +LD+W V+ +C+ D+ + V
Sbjct: 62 STLGHEGNIVPSKEILDLWRSVEAVCFDVDSTVCV 96
>At1g30450.3 68414.m03722 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 199 LKGSGSW*EQYQRTVGTIDSRWV 131
+KG W +YQR GTID W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789
>At1g30450.2 68414.m03721 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 199 LKGSGSW*EQYQRTVGTIDSRWV 131
+KG W +YQR GTID W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789
>At1g30450.1 68414.m03720 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 199 LKGSGSW*EQYQRTVGTIDSRWV 131
+KG W +YQR GTID W+
Sbjct: 767 IKGLDEWPNEYQRQYGTIDLYWI 789
>At4g11530.1 68417.m01850 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 931
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +1
Query: 136 ILNQWFQQCAGIVLTNYHYLSTATCFHGEF-----YDPAYRRIIADLPVAVS 276
+LN F L + Y+ST TCF+G F YD RRI++ L V+
Sbjct: 2 MLNTLFLPIFLFFLITFDYVSTQTCFNGYFKPNGTYDLNRRRILSSLASKVT 53
>At5g05700.1 68418.m00627 arginine-tRNA-protein transferase 1 /
arginyltransferase 1 / arginyl-tRNA-protein transferase
1 (ATE1) identical to SP|Q9ZT48 Arginine-tRNA-protein
transferase 1 (EC 2.3.2.8) (R-transferase 1)
(Arginyltransferase 1) (Arginyl-tRNA--protein
transferase 1) {Arabidopsis thaliana}
Length = 632
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +3
Query: 144 SMVPTVRWYCSHQLPLPFNCYLFPWRILRSCIPSHYRGSSRRSE---PGEISYVHFAVNH 314
S + + W +Q P Y + + SC Y+ + R SE P +V F V
Sbjct: 424 SAIQEINWVIENQARCPSLQYYYLGYYIHSCSKMRYKAAYRPSELLCPLRFQWVPFEVAR 483
Query: 315 PEFSEENY 338
P ++ Y
Sbjct: 484 PMLDKKPY 491
>At4g04870.1 68417.m00709 CDP-alcohol phosphatidyltransferase family
protein similar to SP|Q07560 Cardiolipin synthetase (EC
2.7.8.-) {Saccharomyces cerevisiae; contains Pfam
profile PF01066: CDP-alcohol phosphatidyltransferase
Length = 341
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 129 PTHLESMVPTVRWYCSHQLPLPFNCYLFPWRILRSCIPSHYRGS 260
P + P +W+ PL + PW++L+S P H+RG+
Sbjct: 44 PHFSHRLSPLSKWFVPLNGPLFLSSP--PWKLLQSATPLHWRGN 85
>At1g02230.1 68414.m00161 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) protein
Length = 579
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1
Query: 671 SAFWKKAGHPSQYCRSRGHQPGPNRRRICYQSRRD 567
S FWKK G R RG++ +R+ RD
Sbjct: 85 SGFWKKTGKTMTVMRKRGNREKIGEKRVLVFKNRD 119
>At5g20480.1 68418.m02434 leucine-rich repeat transmembrane protein
kinase, putative protein kinase Xa21, Oryza sativa,
PIR:A57676
Length = 1031
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +1
Query: 196 STATCFHGEFYDPAYRRIIADLPVAVSPVKYLMFTLLL-------TIPNSLRRITTRM*A 354
+ A C E+ D Y R+ +LP +++ + + +L L TIP+ + + +
Sbjct: 339 AVANCTQLEYLDVGYNRLGGELPASIANLSTTLTSLFLGQNLISGTIPHDIGNLVSLQEL 398
Query: 355 SYE*HMPSTSAQTSSRVLLSNKV 423
S E +M S S LL+ +V
Sbjct: 399 SLETNMLSGELPVSFGKLLNLQV 421
>At4g33600.1 68417.m04773 expressed protein
Length = 453
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 138 LESMVPTVRWYCSHQLPLPFNCYLFPWRILR 230
L +MVP V W HQ P L+ W LR
Sbjct: 183 LSAMVPFVAWSLRHQCENPQRWVLYHWGELR 213
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,201,594
Number of Sequences: 28952
Number of extensions: 391264
Number of successful extensions: 1072
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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