Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0982
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    27   0.16 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    26   0.28 
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    26   0.37 
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    26   0.37 
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    26   0.37 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    25   0.49 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.4  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   4.5  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 465 YQLGNEILR*WHIFPAMCTNMLFAFAGRSED 557
           Y+ GN      HI P +CT+++++F G   D
Sbjct: 36  YRWGNGRFTVDHIDPYLCTHIIYSFVGLQAD 66


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +3

Query: 465 YQLGNEILR*WHIFPAMCTNMLFAFAGRSED 557
           Y+L N       I P +CT+++++F G  +D
Sbjct: 32  YRLNNGKFTVEDIDPTLCTHLIYSFVGLGDD 62


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 507 PAMCTNMLFAFAGRSED 557
           P +CT++L+AF G  +D
Sbjct: 47  PTLCTHLLYAFVGLRDD 63


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 507 PAMCTNMLFAFAGRSED 557
           P +CT++L+AF G  ED
Sbjct: 48  PNLCTHILYAFVGLRED 64


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 507 PAMCTNMLFAFAGRSED 557
           P +CT++L+AF G  ED
Sbjct: 48  PNLCTHILYAFVGLRED 64


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 498 HIFPAMCTNMLFAF 539
           HI P +CT+++FAF
Sbjct: 110 HIIPDLCTHIIFAF 123



 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = +3

Query: 501 IFPAMCTNMLFAFA 542
           I P++CT++++AFA
Sbjct: 546 INPSLCTHIIYAFA 559


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +1

Query: 211  HFESCWKKTTSLYWSSQGTTVFWAMGSLR 297
            H    W    S +WSS  T+ +W   + R
Sbjct: 1030 HMHPDWTTKPSTWWSSTTTSPWWTTTTTR 1058



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 498 HIFPAMCTNMLFAFA 542
           HI   +CT++++AFA
Sbjct: 660 HIDQRLCTHVVYAFA 674


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 747 GYERQVISWRCETSVNP 697
           G+ R V++W+  T V+P
Sbjct: 724 GFPRPVVTWKRATGVSP 740


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 501 IFPAMCTNMLFAFAGRSED 557
           I P +CT++ +AF G  +D
Sbjct: 47  INPDLCTHINYAFVGLDKD 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,755
Number of Sequences: 336
Number of extensions: 3933
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)