Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0982
(747 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33) 91 9e-19
SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06) 85 8e-17
SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 8e-17
SB_26325| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_16276| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_14579| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.061
SB_25531| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_28115| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2) 30 2.3
SB_22490| Best HMM Match : Fz (HMM E-Value=8.3e-32) 29 5.3
SB_8676| Best HMM Match : Peptidase_M18 (HMM E-Value=0) 28 9.2
>SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)
Length = 991
Score = 91.1 bits (216), Expect = 9e-19
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = +2
Query: 8 AADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGTR 187
+ +WVL P L YILA+ G+DVWLGN RG YS AH+K + D+ S+FW ++W+++
Sbjct: 164 STNWVLNSPHDSLGYILADKGFDVWLGNIRGNEYSAAHVKWNKDS-SKFWDWTWQQMAQY 222
Query: 188 DLPAMIDYTLKVAGKRRLHYIG 253
DLPAMIDY + ++ Y+G
Sbjct: 223 DLPAMIDYVTLATSQSQVFYVG 244
>SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06)
Length = 226
Score = 84.6 bits (200), Expect = 8e-17
Identities = 38/83 (45%), Positives = 52/83 (62%)
Frame = +2
Query: 5 SAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGT 184
SA +WV +ILA+ +DVWLGN RG Y + H+KL D+D+ FW FS++E+
Sbjct: 30 SATNWVTNLYNESFGFILADQCFDVWLGNVRGNTYGKRHVKLPVDSDA-FWDFSFDEMAK 88
Query: 185 RDLPAMIDYTLKVAGKRRLHYIG 253
DLPAMID+ K G+ L+Y G
Sbjct: 89 YDLPAMIDFVTKTTGQASLYYAG 111
Score = 31.5 bits (68), Expect = 0.75
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 241 SLYWS--SQGTTVFWAMGSLRPEYNSKIIAMQAYAPVAYLEFNANRLLKLIAPHANSIEA 414
SLY++ SQGT + + + P K+ A A APV+ + + LK +A + IE
Sbjct: 106 SLYYAGHSQGTMIGFIAFAHNPAVIQKVKAFYALAPVSTVS-HMGGALKYLAYLSPEIEF 164
Query: 415 LTSLIGINELFGRSDFFTNLGMRFC 489
L ++G+ + D L C
Sbjct: 165 LFKVLGVRDFLPTDDLMRVLADLVC 189
>SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 668
Score = 84.6 bits (200), Expect = 8e-17
Identities = 38/83 (45%), Positives = 52/83 (62%)
Frame = +2
Query: 5 SAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGT 184
SA +WV +ILA+ +DVWLGN RG Y + H+KL D+D+ FW FS++E+
Sbjct: 353 SATNWVTNLYNESFGFILADQCFDVWLGNVRGNTYGKRHVKLPVDSDA-FWDFSFDEMAK 411
Query: 185 RDLPAMIDYTLKVAGKRRLHYIG 253
DLPAMID+ K G+ L+Y G
Sbjct: 412 YDLPAMIDFVTKTTGQASLYYAG 434
Score = 48.4 bits (110), Expect = 6e-06
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 513 MCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLINKNFLQ 665
+C++ LF AG N T LP+ + HTPAG +V+ + H+ Q+ + Q
Sbjct: 520 VCSDFLFLIAGMDRSQLNETRLPIYISHTPAGTSVKNVVHFAQIFREKKFQ 570
Score = 31.1 bits (67), Expect = 0.99
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 241 SLYWS--SQGTTVFWAMGSLRPEYNSKIIAMQAYAPVAYLEFNANRLLKLIAPHANSIEA 414
SLY++ SQGT + + + P K+ A A APV+ + + LK +A + IE
Sbjct: 429 SLYYAGHSQGTMIGFIAFAHNPAVIQKVKAFYALAPVSTVS-HMGGALKYLAYLSPEIEF 487
Query: 415 LTSLIGINELFGRSDFFTNLGMRFC 489
L ++G+ + D L C
Sbjct: 488 LFKVLGVRDFLPTDDVMRVLADLVC 512
>SB_26325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 35.5 bits (78), Expect = 0.046
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 570 TMLPVKLGHTPAGIAVRQIAHYGQLINKNFLQ 665
T LP+ + HTPAG +V+ + H+ Q+ + Q
Sbjct: 1 TRLPIYISHTPAGTSVKNVVHFAQIFREKKFQ 32
>SB_16276| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 35.5 bits (78), Expect = 0.046
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 570 TMLPVKLGHTPAGIAVRQIAHYGQLINKNFLQ 665
T LP+ + HTPAG +V+ + H+ Q+ + Q
Sbjct: 1 TRLPIYISHTPAGTSVKNVVHFAQIFREKKFQ 32
>SB_14579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 35.1 bits (77), Expect = 0.061
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 570 TMLPVKLGHTPAGIAVRQIAHYGQL 644
T LPV + HTPAG +V+ + HY Q+
Sbjct: 1 TRLPVYISHTPAGTSVKNMIHYAQM 25
>SB_25531| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 167 WEEIGTRDLPAMIDYTLKVAGKRRLHYIG 253
++E+ DLPAMID+ K G+ L+Y G
Sbjct: 2 FDEMAKYDLPAMIDFVTKTTGQASLYYAG 30
Score = 31.1 bits (67), Expect = 0.99
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 241 SLYWS--SQGTTVFWAMGSLRPEYNSKIIAMQAYAPVAYLEFNANRLLKLIAPHANSIEA 414
SLY++ SQGT + + + P K+ A A APV+ + + LK +A + IE
Sbjct: 25 SLYYAGHSQGTMIGFIAFAHNPAVIQKVKAFYALAPVSTVS-HMGGALKYLAYLSPEIEF 83
Query: 415 LTSLIGINELFGRSDFFTNLGMRFC 489
L ++G+ + D L C
Sbjct: 84 LFKVLGVRDFLPTDDVMRVLADLVC 108
>SB_28115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 513 MCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLIN 650
+C ++ G + N + +PV H P+G + + I H+GQ+ N
Sbjct: 214 LCYDISELIFGFDDGNANMSRVPVFFTHFPSGTSFKNIIHFGQVHN 259
>SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2)
Length = 265
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +3
Query: 513 MCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLINKNFLQ 665
+C +++ G N T +PV + H G + + I H+ Q++ +N Q
Sbjct: 123 LCYDLMETVVGFDSPNINETRVPVYVSHFFEGTSFKDIVHFSQMMYQNRCQ 173
>SB_22490| Best HMM Match : Fz (HMM E-Value=8.3e-32)
Length = 308
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 561 HNATMLPVKLGHTPAGIAVRQIAHYGQLINKN 656
+N T LP LGHT +I Y QLI+ N
Sbjct: 38 YNMTRLPNHLGHTSQRQIEHEINEYSQLISAN 69
>SB_8676| Best HMM Match : Peptidase_M18 (HMM E-Value=0)
Length = 1161
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = -2
Query: 578 QHSGIVHVFTASGKSE*HICAHRRKNVPSAQNLIPKLVKKSDLPNSSFIPIRLVSASILL 399
QHS ++ + K E H CA K+ KL +D P + IP +V+ L+
Sbjct: 232 QHSAMIPFLLPAAKEEKHQCALHPKDYKKT----TKLTWLADTPTAPTIPAVMVNFDNLI 287
Query: 398 ACGAMSLSNLF 366
+ G ++ ++ F
Sbjct: 288 SKGIITKTDDF 298
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,837,543
Number of Sequences: 59808
Number of extensions: 502517
Number of successful extensions: 1175
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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