Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0982
         (747 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64849-2|AAC48051.1|  411|Caenorhabditis elegans Hypothetical pr...   100   1e-21
Z70780-7|CAA94824.1|  411|Caenorhabditis elegans Hypothetical pr...    99   4e-21
AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical ...    93   2e-19
AF022976-9|AAC69088.2|  404|Caenorhabditis elegans Hypothetical ...    92   4e-19
Z79696-2|CAB01973.1|  405|Caenorhabditis elegans Hypothetical pr...    90   2e-18
AF067942-3|AAL11486.1|  351|Caenorhabditis elegans Hypothetical ...    86   2e-17
AF067942-2|AAG45574.1|  403|Caenorhabditis elegans Hypothetical ...    86   2e-17
Z81055-8|CAB02896.2|  409|Caenorhabditis elegans Hypothetical pr...    71   1e-12
AL117200-4|CAB60584.1|  401|Caenorhabditis elegans Hypothetical ...    64   1e-10
AC024200-10|AAF35999.1|  284|Caenorhabditis elegans Hypothetical...    35   0.053
AC024865-1|AAF60878.1|  157|Caenorhabditis elegans Hypothetical ...    29   4.6  
U23521-4|AAC46816.4|  389|Caenorhabditis elegans Hypothetical pr...    28   6.1  

>U64849-2|AAC48051.1|  411|Caenorhabditis elegans Hypothetical
           protein K04A8.5 protein.
          Length = 411

 Score =  100 bits (239), Expect = 1e-21
 Identities = 40/83 (48%), Positives = 56/83 (67%)
 Frame = +2

Query: 5   SAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGT 184
           S+ DWV   P     ++ A+AG+DVWLGN RG  YSR H+ L+PD D +FW +SW++I  
Sbjct: 93  SSFDWVANSPHQSAGFVFADAGFDVWLGNFRGNTYSRKHVSLNPDKDPKFWDWSWDQISE 152

Query: 185 RDLPAMIDYTLKVAGKRRLHYIG 253
            DLPAMI   L+++G+  L+Y G
Sbjct: 153 YDLPAMIGKALEISGQESLYYTG 175



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +3

Query: 516 CTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLIN 650
           C+++   F G + +  N T +PV L HTPAG +   +AH  Q+ +
Sbjct: 264 CSDITLLFIGTANENWNQTRIPVYLAHTPAGSSSNVMAHLDQMFS 308



 Score = 31.1 bits (67), Expect = 0.87
 Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
 Frame = +1

Query: 241 SLYWS--SQGTTVFWAMGSLRPEYNSKIIAMQAYAPVAYLEFNANRLLKLIAPHANSIEA 414
           SLY++  S GT   +A  S  P+++ KI    A AP+  ++      L L        E 
Sbjct: 170 SLYYTGFSLGTLTMFAKLSTDPKFSRKIKKYFALAPIGSIKHAHGVFLFLGRHFGKDYEE 229

Query: 415 LTSLIGINELFGRSDFFTNLGMRFC 489
                G +ELFG S  F  +    C
Sbjct: 230 YVKKHGSDELFGSSLLFKKIVKYTC 254


>Z70780-7|CAA94824.1|  411|Caenorhabditis elegans Hypothetical
           protein F46B6.8 protein.
          Length = 411

 Score = 98.7 bits (235), Expect = 4e-21
 Identities = 41/84 (48%), Positives = 60/84 (71%)
 Frame = +2

Query: 2   ASAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIG 181
           A A+DWV   P    A++ A+AG+DVWLGN RGT Y R + KLDP +++ FW+FSW+E+ 
Sbjct: 89  ACASDWVDNLPTQSAAFVFADAGFDVWLGNVRGTTYGRKNTKLDP-SETAFWQFSWDEMA 147

Query: 182 TRDLPAMIDYTLKVAGKRRLHYIG 253
             D+PAM+D+ L + G+  L+Y+G
Sbjct: 148 QYDVPAMVDHVLAMTGQENLYYMG 171



 Score = 34.7 bits (76), Expect = 0.070
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 513 MCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLI 647
           +C N LF   G   D  NA+   +     PAG + + I H+ Q++
Sbjct: 261 LCDNELFLIGGPESDQWNASRTAIYSSQDPAGTSTQNIVHWMQMV 305


>AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical
           protein Y57E12B.3 protein.
          Length = 684

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 40/79 (50%), Positives = 51/79 (64%)
 Frame = +2

Query: 17  WVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGTRDLP 196
           W+L  P     YI A+ GYDVWLGN RG  YS+ H ++    D  FWKFSWEE+   DLP
Sbjct: 338 WLLNLPRQSAGYIFADQGYDVWLGNMRGNTYSKEHTRMT-SADRRFWKFSWEEMARYDLP 396

Query: 197 AMIDYTLKVAGKRRLHYIG 253
           AMI+Y LK   ++ L+Y+G
Sbjct: 397 AMINYALKTTKRQNLYYVG 415



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = +3

Query: 513 MCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLINK 653
           +C N +FA +G + +  N + + + L H PAG + R I H+ Q++ K
Sbjct: 501 LCENFIFAVSGPNSNQFNNSRIGIYLAHNPAGTSSRNILHFAQMVKK 547



 Score = 31.1 bits (67), Expect = 0.87
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +1

Query: 667 RYDHGRLTNWRVYRSFTPPRYDLSLI 744
           R+DHG+  N ++Y + +PP YD+  I
Sbjct: 552 RFDHGKDLNLKIYGAPSPPEYDIRKI 577


>AF022976-9|AAC69088.2|  404|Caenorhabditis elegans Hypothetical
           protein R11G11.14 protein.
          Length = 404

 Score = 91.9 bits (218), Expect = 4e-19
 Identities = 40/83 (48%), Positives = 56/83 (67%)
 Frame = +2

Query: 5   SAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGT 184
           ++ DW +  P    A+I A+AG+DVWLGN RG  YS  H  L   + S+FW++SW+E+ T
Sbjct: 85  ASTDWTMNLPEQSAAFIFADAGFDVWLGNMRGNTYSMKHKNLKASH-SDFWEWSWDEMAT 143

Query: 185 RDLPAMIDYTLKVAGKRRLHYIG 253
            DLPAMID  L+V G+  L+Y+G
Sbjct: 144 YDLPAMIDKVLEVTGQESLYYMG 166



 Score = 44.8 bits (101), Expect = 7e-05
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = +3

Query: 513 MCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLI 647
           +C N+ F  AG   D  N+T +PV   H PAG A + I H+ Q++
Sbjct: 255 LCDNVCFLIAGPESDQWNSTRVPVYASHDPAGTATQNIVHWIQMV 299


>Z79696-2|CAB01973.1|  405|Caenorhabditis elegans Hypothetical
           protein F54F3.3 protein.
          Length = 405

 Score = 89.8 bits (213), Expect = 2e-18
 Identities = 41/83 (49%), Positives = 56/83 (67%)
 Frame = +2

Query: 5   SAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGT 184
           S+++WV+  P    A++ A+AGYDVWLGN RG  YS  H  L P + S FW +SW+E+  
Sbjct: 86  SSSNWVVNLPTESAAFLFADAGYDVWLGNFRGNTYSMKHKNLKPSH-SAFWDWSWDEMQQ 144

Query: 185 RDLPAMIDYTLKVAGKRRLHYIG 253
            DLPAMI+  L+V G+  L+YIG
Sbjct: 145 YDLPAMIEKALEVTGQDSLYYIG 167



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 16/45 (35%), Positives = 29/45 (64%)
 Frame = +3

Query: 513 MCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLI 647
           +C +++F  AG   +  NAT +P+ + HTPAG + + I H+ Q++
Sbjct: 256 VCDDVMFLIAGPESNQLNATRVPIYVAHTPAGTSTQNIVHWIQMV 300


>AF067942-3|AAL11486.1|  351|Caenorhabditis elegans Hypothetical
           protein ZK6.7b protein.
          Length = 351

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 37/83 (44%), Positives = 56/83 (67%)
 Frame = +2

Query: 5   SAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGT 184
           +++DWV+  P     ++ A+AG+DVWLGN RG  YS  H  L P + S FW +SW+E+ T
Sbjct: 84  ASSDWVVNLPDQSAGFLFADAGFDVWLGNMRGNTYSMKHKDLKPSH-SAFWDWSWDEMAT 142

Query: 185 RDLPAMIDYTLKVAGKRRLHYIG 253
            DL AMI++ L+V G+  ++Y+G
Sbjct: 143 YDLNAMINHVLEVTGQDSVYYMG 165



 Score = 44.8 bits (101), Expect = 7e-05
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +3

Query: 513 MCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLIN 650
           +C N+LF  AG   D  N T +PV   H PAG + + I H+ Q+++
Sbjct: 254 LCDNVLFLIAGPESDQWNQTRVPVYATHDPAGTSTQNIVHWMQMVH 299


>AF067942-2|AAG45574.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK6.7a protein.
          Length = 403

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 37/83 (44%), Positives = 56/83 (67%)
 Frame = +2

Query: 5   SAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGT 184
           +++DWV+  P     ++ A+AG+DVWLGN RG  YS  H  L P + S FW +SW+E+ T
Sbjct: 84  ASSDWVVNLPDQSAGFLFADAGFDVWLGNMRGNTYSMKHKDLKPSH-SAFWDWSWDEMAT 142

Query: 185 RDLPAMIDYTLKVAGKRRLHYIG 253
            DL AMI++ L+V G+  ++Y+G
Sbjct: 143 YDLNAMINHVLEVTGQDSVYYMG 165



 Score = 44.8 bits (101), Expect = 7e-05
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +3

Query: 513 MCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLIN 650
           +C N+LF  AG   D  N T +PV   H PAG + + I H+ Q+++
Sbjct: 254 LCDNVLFLIAGPESDQWNQTRVPVYATHDPAGTSTQNIVHWMQMVH 299


>Z81055-8|CAB02896.2|  409|Caenorhabditis elegans Hypothetical
           protein F01G10.7 protein.
          Length = 409

 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 29/84 (34%), Positives = 48/84 (57%)
 Frame = +2

Query: 2   ASAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIG 181
           A    W+         ++ A+AG+D+W+ N+RGT  S+ HI   P+N  +FW F+W+++ 
Sbjct: 83  ADGFSWIPNLANQSAGFVFADAGFDIWIANSRGTPASQKHIGYGPEN-QKFWNFTWQQMS 141

Query: 182 TRDLPAMIDYTLKVAGKRRLHYIG 253
             DL A +D  LK   +  L+Y+G
Sbjct: 142 EFDLTASVDLVLKETKQEFLYYLG 165



 Score = 31.9 bits (69), Expect = 0.50
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +3

Query: 513 MCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLI 647
           +CT +   F   +E M N + + V L HTPA  +V+ + H+ QL+
Sbjct: 251 ICT-LDIGFIDGNEKMFNQSRVGVYLCHTPAATSVKDLQHWIQLV 294


>AL117200-4|CAB60584.1|  401|Caenorhabditis elegans Hypothetical
           protein Y50E8A.7 protein.
          Length = 401

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 34/83 (40%), Positives = 41/83 (49%)
 Frame = +2

Query: 5   SAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGT 184
           S+  ++L  P    AYI A+AG+DVWLGN RGT Y   H      N   FW FS  E   
Sbjct: 81  SSYHFLLNLPSQSAAYIFADAGFDVWLGNIRGTEYGLNHTSFS-TNGVNFWNFSLYEHSH 139

Query: 185 RDLPAMIDYTLKVAGKRRLHYIG 253
            DL   I+Y L       L Y+G
Sbjct: 140 YDLRQQIEYVLDYTRHESLFYVG 162


>AC024200-10|AAF35999.1|  284|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.7 protein.
          Length = 284

 Score = 35.1 bits (77), Expect = 0.053
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +2

Query: 50  YILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGTR 187
           Y+  EA  D ++  ARG +  RA+ +LDP+ +  FW   W EI  +
Sbjct: 174 YLEMEAAVD-YIERARGVF--RANKELDPNREGSFWTDDWNEIAEK 216



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 89  NARGTYYSRAHIKLDPDNDSEFWKFSWEEI 178
           NA G Y  +A++++DP   S FW   W EI
Sbjct: 53  NAMGVY--QANLEVDPTGTSTFWTEEWNEI 80


>AC024865-1|AAF60878.1|  157|Caenorhabditis elegans Hypothetical
           protein Y74C10AL.2 protein.
          Length = 157

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = +1

Query: 16  LGFDGSRCWFSIHFG*SWL*CVAWKCTW-----YILLQSSH*IRPGQRL 147
           LG  GSR W    F  S+   VA   TW     Y+L+Q SH + PG  L
Sbjct: 87  LGTKGSRLWLMAAFVVSFASLVA--ATWILFSDYVLIQGSHSVWPGVAL 133


>U23521-4|AAC46816.4|  389|Caenorhabditis elegans Hypothetical
           protein F41C3.11 protein.
          Length = 389

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = -1

Query: 744 YERQVISWRCETSVNPPICQASVIISSEENFC 649
           YER  ++W C T++   +   ++I+S + + C
Sbjct: 141 YERMTLNWICNTALMDNVHNRTLIVSMDSSTC 172


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,743,911
Number of Sequences: 27780
Number of extensions: 373379
Number of successful extensions: 947
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)