Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0982
         (747 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.7  
AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    23   3.0  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    23   3.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   7.0  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 98  HVHFQATHHNQLQPKCMLNQHLDPSKPSQQQK 3
           H H Q  HH+ LQ   + + H    +  QQQ+
Sbjct: 141 HHHLQ-NHHHHLQSTAVQDHHRPYQQQQQQQQ 171


>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 201 IAGRSRVPISSQLNFQNSESLSGSNL 124
           + G S V + SQ+N   S  +SG+N+
Sbjct: 30  VKGESNVDVVSQINSLVSSIVSGANV 55


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 201 IAGRSRVPISSQLNFQNSESLSGSNL 124
           + G S V + SQ+N   S  +SG+N+
Sbjct: 30  VKGESNVDVVSQINSLVSSIVSGANV 55


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +3

Query: 585 KLGHTPAGIAVRQIAHYGQLINKNFLQTI*SRTLD 689
           K  HTP GI    IAH   L   N L+ +  R LD
Sbjct: 791 KQSHTPNGIVKTWIAHDRYL--PNSLRILLKRFLD 823


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 243  IILVLTRNYCLLGYGIFE 296
            +++VLTRN+ L  +  FE
Sbjct: 1127 VLIVLTRNFLLTEWSRFE 1144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,035
Number of Sequences: 438
Number of extensions: 4228
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)