Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0982
(747 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g15230.1 68415.m01737 lipase family protein similar to SP|P07... 78 7e-15
At5g14180.1 68418.m01658 lipase family protein similar to SP|Q64... 77 9e-15
At1g73920.2 68414.m08561 lipase family protein similar to lipase... 54 1e-07
At1g73920.1 68414.m08560 lipase family protein similar to lipase... 54 1e-07
At1g18460.1 68414.m02303 lipase family protein similar to triacy... 52 3e-07
At1g77670.1 68414.m09043 aminotransferase class I and II family ... 31 1.1
At4g34570.1 68417.m04912 bifunctional dihydrofolate reductase-th... 29 2.5
At2g16370.1 68415.m01873 bifunctional dihydrofolate reductase-th... 29 2.5
At1g51870.1 68414.m05847 protein kinase family protein contains ... 29 2.5
At1g70150.1 68414.m08072 zinc finger (MYND type) family protein ... 29 4.3
At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger) fa... 28 5.7
At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger) fa... 28 5.7
At3g57570.1 68416.m06410 expressed protein 28 7.6
At4g04110.1 68417.m00581 Toll-Interleukin-Resistance (TIR) domai... 27 10.0
>At2g15230.1 68415.m01737 lipase family protein similar to SP|P07098
Triacylglycerol lipase, gastric precursor (EC 3.1.1.3)
{Homo sapiens}; contains Pfam profile PF04083:
ab-hydrolase associated lipase region
Length = 393
Score = 77.8 bits (183), Expect = 7e-15
Identities = 32/73 (43%), Positives = 44/73 (60%)
Frame = +2
Query: 17 WVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGTRDLP 196
W L P L +ILA+ G+DVW+GN RGT YS H+ L D D EFW +SW+++ DL
Sbjct: 88 WFLNSPKESLGFILADHGFDVWVGNVRGTRYSYGHVTLS-DTDKEFWDWSWQDLAMYDLA 146
Query: 197 AMIDYTLKVAGKR 235
MI Y ++ +
Sbjct: 147 EMIQYLYSISNSK 159
>At5g14180.1 68418.m01658 lipase family protein similar to SP|Q64194
Lysosomal acid lipase/cholesteryl ester hydrolase
precursor (EC 3.1.1.13) {Rattus norvegicus}; contains
Pfam profile PF04083: ab-hydrolase associated lipase
region
Length = 418
Score = 77.4 bits (182), Expect = 9e-15
Identities = 34/79 (43%), Positives = 52/79 (65%)
Frame = +2
Query: 17 WVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGTRDLP 196
W+L L ILA+ G+DVW+GN RGT +SR H L+P + FW ++W+E+ + DLP
Sbjct: 112 WLLNPADQNLPLILADQGFDVWMGNTRGTRFSRRHKYLNP-SQRAFWNWTWDELVSYDLP 170
Query: 197 AMIDYTLKVAGKRRLHYIG 253
AM D+ + G +++HY+G
Sbjct: 171 AMFDHIHGLTG-QKIHYLG 188
>At1g73920.2 68414.m08561 lipase family protein similar to lipase
GB:CAA74737 [SP|O46108] from [Drosophila melanogaster]
Length = 635
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/68 (42%), Positives = 40/68 (58%)
Frame = +2
Query: 5 SAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGT 184
S+ WV G A+ + GYDV+LGN RG SR H+ + + EFW++S E GT
Sbjct: 274 SSMGWVSNGVVGSPAFAAYDQGYDVFLGNFRGLV-SRDHVNKNISS-KEFWRYSINEHGT 331
Query: 185 RDLPAMID 208
D+PAMI+
Sbjct: 332 EDIPAMIE 339
>At1g73920.1 68414.m08560 lipase family protein similar to lipase
GB:CAA74737 [SP|O46108] from [Drosophila melanogaster]
Length = 704
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/68 (42%), Positives = 40/68 (58%)
Frame = +2
Query: 5 SAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGT 184
S+ WV G A+ + GYDV+LGN RG SR H+ + + EFW++S E GT
Sbjct: 343 SSMGWVSNGVVGSPAFAAYDQGYDVFLGNFRGLV-SRDHVNKNISS-KEFWRYSINEHGT 400
Query: 185 RDLPAMID 208
D+PAMI+
Sbjct: 401 EDIPAMIE 408
>At1g18460.1 68414.m02303 lipase family protein similar to
triacylglycerol lipase, gastric precursor (EC 3.1.1.3)
{Canis familiaris} [SP|P80035]
Length = 701
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/68 (41%), Positives = 40/68 (58%)
Frame = +2
Query: 5 SAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDSEFWKFSWEEIGT 184
S+ WV G A+ + GYDV+LGN RG SR H+K + + +FW++S E T
Sbjct: 341 SSMGWVSNGVVGSPAFAAYDQGYDVFLGNFRGLV-SRDHVKKNISS-KDFWRYSINEHAT 398
Query: 185 RDLPAMID 208
D+PAMI+
Sbjct: 399 EDIPAMIE 406
>At1g77670.1 68414.m09043 aminotransferase class I and II family
protein similar to kynurenine aminotransferase
/glutamine transaminase K GI:1030066 [Rattus norvegicus]
Length = 440
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 56 LAEAGYDVWLGNARGTYYSRA-HIKLDPDNDSEFWKFSWEEIGTRDLPAMIDYTLKVAGK 232
L E G+ V+ + GTY+ A H +ND F ++ EE+G +P + Y GK
Sbjct: 354 LKEVGFTVFPSS--GTYFVVADHTPFGMENDVAFCEYLIEEVGVVAIPTSVFYLNPEEGK 411
Query: 233 RRLHY 247
+ +
Sbjct: 412 NLVRF 416
>At4g34570.1 68417.m04912 bifunctional dihydrofolate
reductase-thymidylate synthase 2 / DHFR-TS (THY-2)
identical to SP|Q05763
Length = 565
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +2
Query: 47 AYILAEAGYDVWLGNARGTYYSRAHIKLDPDND-SEFWKFSWEEIGTRDLPAMIDYT 214
A +L E G +W GNA Y + + D + F W G + DYT
Sbjct: 350 AKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHADYT 406
>At2g16370.1 68415.m01873 bifunctional dihydrofolate
reductase-thymidylate synthase 1 / DHFR-TS (THY-1)
identical to GP:289193:L08593 [SP|Q05762]
Length = 519
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +2
Query: 47 AYILAEAGYDVWLGNARGTYYSRAHIKLDPDND-SEFWKFSWEEIGTRDLPAMIDYT 214
A +L E G +W GNA Y + + D + F W G + DYT
Sbjct: 304 AKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAKYTDMHADYT 360
>At1g51870.1 68414.m05847 protein kinase family protein contains
Serine/Threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 837
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 619 LTAMPAGVCPSFTGNIVALCMS-SLRPAKANNIFVHIAGKMCHQRRISFPS 470
LT VC TG S LRP NNI++ +G M Q R+ FPS
Sbjct: 152 LTQKRLQVCLVKTGKTTPFISSLELRPL-INNIYIAESGSMVLQNRVYFPS 201
>At1g70150.1 68414.m08072 zinc finger (MYND type) family protein
contains Pfam profile PF01753: MYND finger
Length = 387
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 200 MIDYTLKVAGKRRLHYIGPHKELLSFGLW 286
M + T +++ + R+HY+GP KEL G++
Sbjct: 176 MGNLTPQISDELRIHYLGPQKELGQLGVF 204
>At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 438
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 631 CAICLTAMPAGVCPSFTGNIVALCMSSLRPAKANN 527
CAICL A VC G+ VA CMS L+ K+ N
Sbjct: 387 CAICLDAPSEAVCVP-CGH-VAGCMSCLKEIKSKN 419
>At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 462
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 631 CAICLTAMPAGVCPSFTGNIVALCMSSLRPAKANN 527
CAICL A VC G+ VA CMS L+ K+ N
Sbjct: 411 CAICLDAPSEAVCVP-CGH-VAGCMSCLKEIKSKN 443
>At3g57570.1 68416.m06410 expressed protein
Length = 1057
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 343 VAYLEFNANRLLKLIAPHANSIEALTSLIG 432
V L F+++R+LKLI A S++ SLIG
Sbjct: 587 VTGLTFDSDRVLKLIPEWARSVQNWNSLIG 616
>At4g04110.1 68417.m00581 Toll-Interleukin-Resistance (TIR)
domain-containing protein domain signature TIR exists,
suggestive of a disease resistance protein.
Length = 239
Score = 27.5 bits (58), Expect = 10.0
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 516 CTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQLINK 653
C N L ED + ++PV G P+ + +QI ++G++ K
Sbjct: 113 CLNELLEIVRCKEDSNRLVVIPVFYGLDPSHVR-KQIGNFGKIFKK 157
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,620,109
Number of Sequences: 28952
Number of extensions: 343969
Number of successful extensions: 855
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -