Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0981
         (545 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    27   8.8  
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    27   8.8  

>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
           protein F30H5.3 protein.
          Length = 1599

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 353 SPVQKLSTKRISLQCTDLGTLNLICPPVKHIC 448
           S  Q  S+   + +CT +G++ L CP V  +C
Sbjct: 415 SNCQTASSCTSNFECTSIGSMQLCCPTVASVC 446


>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 16/60 (26%), Positives = 23/60 (38%)
 Frame = +1

Query: 97  STDEVADPSSTSRANGLAIGSIAPNDRLLRSFVVTRAATASSQAVNVRYTAPAVDASGPS 276
           ST  V    STS        S + +  +         +T+ S  V    TAP+   +GPS
Sbjct: 445 STSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPS 504


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 16/60 (26%), Positives = 23/60 (38%)
 Frame = +1

Query: 97  STDEVADPSSTSRANGLAIGSIAPNDRLLRSFVVTRAATASSQAVNVRYTAPAVDASGPS 276
           ST  V    STS        S + +  +         +T+ S  V    TAP+   +GPS
Sbjct: 445 STSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPS 504


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,271,853
Number of Sequences: 27780
Number of extensions: 177558
Number of successful extensions: 456
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)