Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0980
(695 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 29 0.048
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 29 0.048
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 23 1.8
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 23 3.2
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 23 3.2
Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor ... 21 9.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.6
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 28.7 bits (61), Expect = 0.048
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -2
Query: 418 YVFTSIPVYFTSLARINFRTFKF*WTLFIGLALH*VLFSKYCICEVFIWSKVEFQVKLMG 239
Y T P+ F +L I + W + IG+ +L Y ++ +W + L
Sbjct: 162 YQVTGTPIIFHNLTLITYSLCVISWAVGIGI----MLAQYYLQADMLLWHTFGYYHILAM 217
Query: 238 SSCICTL--ISC 209
+C+C+L I+C
Sbjct: 218 LNCLCSLWFINC 229
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 100 WIPM*RVSQTFGTTYSGM 153
W+ + + Q G YSGM
Sbjct: 263 WVDLSHMMQQLGKAYSGM 280
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 28.7 bits (61), Expect = 0.048
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -2
Query: 418 YVFTSIPVYFTSLARINFRTFKF*WTLFIGLALH*VLFSKYCICEVFIWSKVEFQVKLMG 239
Y T P+ F +L I + W + IG+ +L Y ++ +W + L
Sbjct: 162 YQVTGTPIIFHNLTLITYSLCVISWAVGIGI----MLAQYYLQADMLLWHTFGYYHILAM 217
Query: 238 SSCICTL--ISC 209
+C+C+L I+C
Sbjct: 218 LNCLCSLWFINC 229
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 100 WIPM*RVSQTFGTTYSGM 153
W+ + + Q G YSGM
Sbjct: 263 WVDLSHMMQQLGKAYSGM 280
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 572 ACTSEATVELGSSGRVGG 519
ACT ++ V GS G VGG
Sbjct: 143 ACTPDSRVGYGSVGLVGG 160
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -3
Query: 453 LCFCFFFMVLTVTFLPAFQ 397
LCFCF+++++ V Q
Sbjct: 324 LCFCFYWLLVMVAMFSRTQ 342
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = -3
Query: 453 LCFCFFFMVLTVTFLPAFQ 397
LCFCF+++++ V Q
Sbjct: 280 LCFCFYWLLVMVAMFSRTQ 298
>Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor
5-like protein protein.
Length = 162
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 33 AVQNAAITEGEEKKDDK 83
AVQ +++TEG+ K K
Sbjct: 65 AVQGSSLTEGKRSKRSK 81
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 245 KLHLEFYFAPNEYFTNTVLTKEY 313
K H++ A NEY N V+ + +
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNH 1506
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 245 KLHLEFYFAPNEYFTNTVLTKEY 313
K H++ A NEY N V+ + +
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNH 1506
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 245 KLHLEFYFAPNEYFTNTVLTKEY 313
K H++ A NEY N V+ + +
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNH 1506
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 245 KLHLEFYFAPNEYFTNTVLTKEY 313
K H++ A NEY N V+ + +
Sbjct: 1484 KSHMQTLGAKNEYGNNNVVARNH 1506
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,116
Number of Sequences: 336
Number of extensions: 3120
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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