Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0980
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40800-9|AAA81494.1| 316|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical pr... 33 0.15
AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of... 33 0.15
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 29 3.2
U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin recepto... 28 5.5
AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical ... 28 7.3
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 28 7.3
AC024803-1|AAL05589.4| 433|Caenorhabditis elegans Hypothetical ... 27 9.7
>U40800-9|AAA81494.1| 316|Caenorhabditis elegans Hypothetical
protein D2096.8 protein.
Length = 316
Score = 69.7 bits (163), Expect = 2e-12
Identities = 35/90 (38%), Positives = 47/90 (52%)
Frame = +2
Query: 239 PHKLHLEFYFAPNEYFTNTVLTKEYLMKCKPDEESPLEFEGPEIYSCKGCEINWNAGXXX 418
P +EF+FA N YF N VLTK YL+ PD E+PL+F+GP + G I W G
Sbjct: 153 PAGFKIEFHFATNPYFKNQVLTKTYLLGFDPDAEAPLQFDGPHVIRAVGDTIEWEDGKNV 212
Query: 419 XXXXXXXXXXXXSRGSVRTVTKSVQADSFF 508
+ + +TK+V+ADSFF
Sbjct: 213 TKKAVKKKQKKGANAG-KFLTKTVKADSFF 241
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +3
Query: 102 DPNVKGIPDFWYNIFRNVSMLSEMMQEHDEPILKCLQDIKVQMHEDPISF 251
DP+ KGI DFW R +++E ++EHD PIL L D+ +DP F
Sbjct: 107 DPSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYLTDVTTAASKDPAGF 156
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 508 HFFNPPTLPEDPNSTVASD-VQALLTADFEIGHYIRERVVSRAVLLYTGE 654
+FF PP ++ N + + L D+E+G IR+ ++ RAVL YTGE
Sbjct: 242 NFFEPPKSKDERNEDEDDEQAEEFLELDYEMGQAIRDTIIPRAVLFYTGE 291
>Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical
protein C27B7.1b protein.
Length = 313
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 266 FAPNEYFTNTVLTKEYLMKCKPDEESPLEFEGPE 367
F PNEYFTN V+TK Y ++ + E E E
Sbjct: 127 FDPNEYFTNEVITKSYHLQSESPSTEITEIEWKE 160
>Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical
protein C27B7.1a protein.
Length = 312
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 266 FAPNEYFTNTVLTKEYLMKCKPDEESPLEFEGPE 367
F PNEYFTN V+TK Y ++ + E E E
Sbjct: 127 FDPNEYFTNEVITKSYHLQSESPSTEITEIEWKE 160
>AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of
presenilin 2 protein.
Length = 312
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 266 FAPNEYFTNTVLTKEYLMKCKPDEESPLEFEGPE 367
F PNEYFTN V+TK Y ++ + E E E
Sbjct: 127 FDPNEYFTNEVITKSYHLQSESPSTEITEIEWKE 160
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +3
Query: 12 EEEELARAVQNAAI---TEGEEKKDDKAIEPPMDPNVKGIPDFWYNIFRNVSMLSEMMQE 182
+EE+ QNA + T E++ + + N + +P IF V + + +
Sbjct: 1101 QEEQRVCYAQNAVVDMKTILEKEFRVNRVNTVLCLNDRPLPQL--TIFEQVRLEKDRLPA 1158
Query: 183 HDEPILKCLQDIKVQMHEDPIS 248
+ P+L L ++V H+DP S
Sbjct: 1159 NSYPVLSKLSTVRVSQHDDPTS 1180
>U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin receptor
substrate homologprotein 1 protein.
Length = 1003
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 329 PDEESPLEFEGPEIYSCKGCEINW 400
P +E P EF PE+Y C C + +
Sbjct: 95 PKDEDPDEFGIPEVYKCGNCLVGF 118
>AL137227-7|CAB70235.1| 787|Caenorhabditis elegans Hypothetical
protein F58D5.6 protein.
Length = 787
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +3
Query: 195 ILKCLQDIKVQMHEDPISFTWNSTLLQMNTSQIQYLL 305
++ C+Q V + + I + TLL+ ++IQY++
Sbjct: 461 VIDCIQSSSVDVFSEAIRYNQQVTLLKSKEAEIQYIV 497
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 102 DPNVKGIPDFWYNIFRNVSM-LSEMMQEHDEPILKCLQDIKVQMHEDPISFTWNSTLLQM 278
+ V+ + IFR ++ ++E E +EP K I +PI+ T ++ L+
Sbjct: 696 ESGVRNLQQHIERIFRKAALQIAEQQNEDEEPAEKATTAITENSEAEPITSTSSADCLKS 755
Query: 279 NTSQI 293
+ QI
Sbjct: 756 SAEQI 760
>AC024803-1|AAL05589.4| 433|Caenorhabditis elegans Hypothetical
protein Y51H7BM.1 protein.
Length = 433
Score = 27.5 bits (58), Expect = 9.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3
Query: 144 ICCTKSLGYPLHW 106
+CC K LGYP +W
Sbjct: 52 LCCEKELGYPSNW 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,249,027
Number of Sequences: 27780
Number of extensions: 294195
Number of successful extensions: 933
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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