Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0977
(377 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 28 2.5
Z54327-1|CAA91119.1| 569|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 28 2.5
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 28 2.5
Z79757-8|CAB02128.2| 355|Caenorhabditis elegans Hypothetical pr... 27 4.5
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 27 5.9
Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical p... 26 7.8
>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 27.9 bits (59), Expect = 2.5
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = -2
Query: 205 DNRGGVDGSNDDGLRDNGALFSLFDDNNGLGLDFSGSNRNTSGDVDVHDELHKRRGTGGN 26
+ +GG N DG +DN + D +G D +G+ +GD + + GN
Sbjct: 526 NGKGGAGNGNGDGDKDNNGKGNGTGDGDG---DGNGNGNGLTGDGNGTGDGDNNESGNGN 582
Query: 25 SRSNDNRS 2
+D S
Sbjct: 583 GDGSDKNS 590
Score = 26.6 bits (56), Expect = 5.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -2
Query: 208 RDNRGGVDGSNDDGLRDNGALFSLFDDNNGLGLDFSGSNRNTSGD 74
+DN G +G+ D NG L D NG G + + N +GD
Sbjct: 540 KDNNGKGNGTGDGDGDGNGNGNGLTGDGNGTGDGDNNESGNGNGD 584
>Z54327-1|CAA91119.1| 569|Caenorhabditis elegans Hypothetical
protein C26D10.1 protein.
Length = 569
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2
Query: 100 GSNRNTSGDVDVHDELHK 47
G+ RN++G+VDVH LHK
Sbjct: 269 GNLRNSNGNVDVHPLLHK 286
>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 27.9 bits (59), Expect = 2.5
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = -2
Query: 205 DNRGGVDGSNDDGLRDNGALFSLFDDNNGLGLDFSGSNRNTSGDVDVHDELHKRRGTGGN 26
+ +GG N DG +DN + D +G D +G+ +GD + + GN
Sbjct: 526 NGKGGAGNGNGDGDKDNNGKGNGTGDGDG---DGNGNGNGLTGDGNGTGDGDNNESGNGN 582
Query: 25 SRSNDNRS 2
+D S
Sbjct: 583 GDGSDKNS 590
Score = 26.6 bits (56), Expect = 5.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -2
Query: 208 RDNRGGVDGSNDDGLRDNGALFSLFDDNNGLGLDFSGSNRNTSGD 74
+DN G +G+ D NG L D NG G + + N +GD
Sbjct: 540 KDNNGKGNGTGDGDGDGNGNGNGLTGDGNGTGDGDNNESGNGNGD 584
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.9 bits (59), Expect = 2.5
Identities = 20/63 (31%), Positives = 26/63 (41%)
Frame = -2
Query: 196 GGVDGSNDDGLRDNGALFSLFDDNNGLGLDFSGSNRNTSGDVDVHDELHKRRGTGGNSRS 17
GG + ND+ +NG + N G G GS GD D + +K G G
Sbjct: 353 GGGNTDNDNWGSNNGNSGGSWG-NGGTG-GSGGSGGGNWGDNDNYGSSNKWNGNGNQDND 410
Query: 16 NDN 8
NDN
Sbjct: 411 NDN 413
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.9 bits (59), Expect = 2.5
Identities = 20/63 (31%), Positives = 26/63 (41%)
Frame = -2
Query: 196 GGVDGSNDDGLRDNGALFSLFDDNNGLGLDFSGSNRNTSGDVDVHDELHKRRGTGGNSRS 17
GG + ND+ +NG + N G G GS GD D + +K G G
Sbjct: 353 GGGNTDNDNWGSNNGNSGGSWG-NGGTG-GSGGSGGGNWGDNDNYGSSNKWNGNGNQDND 410
Query: 16 NDN 8
NDN
Sbjct: 411 NDN 413
>Z79757-8|CAB02128.2| 355|Caenorhabditis elegans Hypothetical
protein F55B12.7 protein.
Length = 355
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 286 AVTLPEELN*TNVQNVFW 339
A TLP EL+ +N++N FW
Sbjct: 175 ATTLPSELHTSNLKNYFW 192
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/64 (21%), Positives = 30/64 (46%)
Frame = -2
Query: 202 NRGGVDGSNDDGLRDNGALFSLFDDNNGLGLDFSGSNRNTSGDVDVHDELHKRRGTGGNS 23
N G+++ G ++G+ + NG + +G+N SG+ + + + G+ GN
Sbjct: 211 NNNNSSGNSNYGSNNSGSGNGNSNSGNGNSGNGNGNNAGNSGNGNGNSNGNNGNGSNGNG 270
Query: 22 RSND 11
N+
Sbjct: 271 NGNN 274
>Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical
protein F59B2.11 protein.
Length = 590
Score = 26.2 bits (55), Expect = 7.8
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = -2
Query: 208 RDNRGGVDGSNDDGLRDNGALFSLFDDNNGLGLDFSGSNRNTSGDVDVHDELHKR----R 41
R+ GV+GSN+DG +N D G G + +N VD +E KR
Sbjct: 31 RNGNNGVNGSNEDGENNN---VDGNDGKGGKGALSQDAIQNNDDLVDQAEEDRKREVYEN 87
Query: 40 GTGGNSRSNDNR 5
G +R ND R
Sbjct: 88 GAVKYTRLNDYR 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,389,025
Number of Sequences: 27780
Number of extensions: 60963
Number of successful extensions: 273
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 273
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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