Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0976
         (715 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          24   4.1  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    24   5.4  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   5.4  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   9.5  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -3

Query: 389 FRLAKIVCVHCSFIKHIASSNYTNFNQTIISVQCWTSVTLN 267
           ++L ++  +  SF+K   +  Y    QT+ S  CW  + LN
Sbjct: 445 YQLTRMCTIRMSFVKGWGAE-YRR--QTVTSTPCWIELHLN 482


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -3

Query: 386 RLAKIVCVHCSFIKHIASSNYTNFNQTIISVQCWTSVTLNRLNTYKG 246
           R  ++V + C  I H +    T+   TI+ ++  +S  L RL   +G
Sbjct: 326 RTLQLVVLDCDTINHPSQLAKTSLAPTIVYLKIASSKVLQRLIKSRG 372


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 459 LTETIRKSANKDMSLILCYKPKLISFGK 376
           L ET   S +KD+   L   P+L SFGK
Sbjct: 273 LVETTEVSTHKDILRKLKADPELQSFGK 300


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -3

Query: 437 LLIKICL*FCVINQN*FR-LAKIVCVHCSFIKHIASSNYTNFNQTIISVQCWTS 279
           L +K+    C + +     + K+ C  C    H++   ++  N + + ++C TS
Sbjct: 382 LRLKVLYTMCAVKEAPHTPIEKLRCYRCLERGHVSRDCHSPVNHSNVCIRCGTS 435


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,356
Number of Sequences: 2352
Number of extensions: 11838
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)