Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0975
         (364 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4E6N1 Cluster: Putative uncharacterized protein; n=1; ...    31   4.8  
UniRef50_UPI0000ECAF81 Cluster: UPI0000ECAF81 related cluster; n...    31   8.3  

>UniRef50_A4E6N1 Cluster: Putative uncharacterized protein; n=1;
           Collinsella aerofaciens ATCC 25986|Rep: Putative
           uncharacterized protein - Collinsella aerofaciens ATCC
           25986
          Length = 464

 Score = 31.5 bits (68), Expect = 4.8
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = +3

Query: 42  IPEECSGGCSSQRSMEHPRRFFAHTKFLLRPLTEAAI*NGTTPQMSQXVSRYILDVTPFQ 221
           +PE  +G    QRS+ H    + H   +L    E A+ +G  P  S   + ++ DV+  +
Sbjct: 234 VPELAAGRGFDQRSVYHAFNVYEHIARVLTVAGELALCDGVAPSSSLMWAAFLHDVSKPE 293

Query: 222 C 224
           C
Sbjct: 294 C 294


>UniRef50_UPI0000ECAF81 Cluster: UPI0000ECAF81 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECAF81 UniRef100 entry -
           Gallus gallus
          Length = 154

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -1

Query: 238 LFEIRHWNGVTSKIYRLTXWLICGVVPF*IAASVSGR-SRNFV*AKKRLG 92
           + E+R   G TS IY  T +L+C V+   + A+VS + +RN   ++ R G
Sbjct: 1   VLEVRPGTGATSVIYSTTVYLLCSVL---VVATVSAKATRNICSSRVRPG 47


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 336,858,790
Number of Sequences: 1657284
Number of extensions: 5804392
Number of successful extensions: 12326
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12325
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12794443530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)