Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0971
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0111 - 12638078-12639328,12640886-12641146 103 2e-22
05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571 81 8e-16
01_03_0153 + 13255667-13255954,13258383-13258529,13258798-132589... 53 2e-07
05_01_0413 - 3253345-3253461,3253595-3253666,3253763-3253876,325... 51 9e-07
02_05_1191 + 34856635-34856775,34856878-34856942,34857096-348571... 51 9e-07
03_01_0439 + 3409422-3409795,3410672-3410897,3411004-3411282,341... 40 0.002
10_08_0003 - 13992276-13992311,13992461-13992598,13992682-139928... 37 0.012
07_03_1550 + 27641099-27641288,27641433-27641646,27641738-276418... 37 0.016
10_08_0357 - 17158414-17160150,17160534-17160710 36 0.021
10_08_0359 - 17167829-17169595,17169976-17169996 35 0.049
10_08_0354 - 17104223-17106061,17106770-17106794,17107317-171075... 35 0.065
02_04_0656 - 24769069-24770814,24771552-24771608,24773307-247735... 33 0.26
11_06_0148 + 20631949-20632338,20632838-20633044,20633168-206332... 32 0.35
11_01_0019 + 135610-136296,136736-137275,137367-137518,137683-13... 31 0.80
02_01_0675 - 5028910-5030379 31 0.80
05_04_0299 - 19958776-19958858,19958883-19959012,19960131-199601... 31 1.1
10_08_0628 + 19389508-19389637,19389774-19389850,19390332-193904... 30 1.9
07_01_0254 - 1893079-1893181,1893455-1893492,1893586-1893706,189... 29 2.4
05_03_0206 - 10049244-10049360,10057973-10058367,10058456-100590... 29 2.4
04_04_0783 - 28040828-28041615,28041942-28043589 29 2.4
01_05_0470 + 22531210-22531530,22532423-22532594,22532685-225328... 29 4.3
01_01_0028 + 209283-209563,209659-209890,210015-210160,210694-21... 29 4.3
06_02_0181 - 12694304-12694398,12694512-12695547 28 5.6
02_05_1061 - 33825948-33825995,33826094-33826243,33827154-338273... 28 5.6
02_05_0727 + 31264798-31265297,31265962-31266417,31266503-31266938 28 5.6
02_05_0502 + 29569563-29570487,29570548-29570621 28 7.5
01_06_1696 + 39256171-39256393,39256513-39256595,39256692-392568... 28 7.5
12_02_1218 - 27088206-27088214,27088577-27088643,27088755-270888... 27 9.9
12_01_0018 + 132654-133304,133726-134265,134357-134436,134673-13... 27 9.9
02_04_0225 - 21063445-21063636,21063726-21063911,21064052-210641... 27 9.9
>01_03_0111 - 12638078-12639328,12640886-12641146
Length = 503
Score = 103 bits (246), Expect = 2e-22
Identities = 49/86 (56%), Positives = 57/86 (66%)
Frame = +1
Query: 253 KDPTLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVK 432
K TLGGTCLNVGCIPSKALLH+SH+YH AK F G++ + D MM K AV
Sbjct: 70 KRGTLGGTCLNVGCIPSKALLHSSHMYHEAKSSFAHHGVKFSNLEVDLPAMMAQKDKAVA 129
Query: 433 GLTGGIAMLFQKNKVNLVKGVGTIVA 510
GLT GI LF+KNKV VKG G + +
Sbjct: 130 GLTKGIEGLFKKNKVTYVKGFGKLAS 155
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +3
Query: 510 PNKVEVHGEKGVETV-NTKNILIASGSEVTPFPGVTFDEKQIITSTGAL 653
P++V V G TV KNI+IA+GS+V PGVT DEK+I++STGAL
Sbjct: 156 PSEVSVDLSDGGSTVVKGKNIIIATGSDVKSLPGVTIDEKKIVSSTGAL 204
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +2
Query: 161 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
++D+VV+G GPGGYVAAIKAAQLG+K +E+
Sbjct: 39 ESDVVVVGGGPGGYVAAIKAAQLGLKTTCIEK 70
>05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571
Length = 527
Score = 81.0 bits (191), Expect = 8e-16
Identities = 51/111 (45%), Positives = 57/111 (51%), Gaps = 25/111 (22%)
Frame = +1
Query: 253 KDPTLGGTCLNVGCIPSK-------------------------ALLHNSHLYHMAKHDFK 357
K TLGGTCLNVGCIPSK ALLH+SH+YH AK F
Sbjct: 69 KRGTLGGTCLNVGCIPSKEVMNHFDPFYLAVPSIYYELRSTMGALLHSSHMYHEAKASFA 128
Query: 358 QRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIVA 510
GI+ + D MM K AV GLT GI LF+KNKV VKG G V+
Sbjct: 129 HHGIKFSNLEIDLPAMMSQKDKAVAGLTKGIEGLFKKNKVEYVKGFGKFVS 179
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +2
Query: 149 ATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
A ++D+VVIG GPGGYVAAIKAAQLG+K +E+
Sbjct: 34 AAGEESDVVVIGGGPGGYVAAIKAAQLGLKTTCIEK 69
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/49 (55%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = +3
Query: 510 PNKVEVHG-EKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGAL 653
P++V V + G TV KNI+IA+GS+V PGVT DEK+I++STGAL
Sbjct: 180 PSEVSVDLLDGGSTTVKGKNIIIATGSDVKSLPGVTIDEKKIVSSTGAL 228
>01_03_0153 +
13255667-13255954,13258383-13258529,13258798-13258932,
13259344-13259461,13260925-13261049,13261407-13261532,
13261617-13261697,13262188-13262250,13262328-13262402,
13263439-13263517,13263627-13263727,13263952-13264065,
13264225-13264338,13264406-13264477,13264561-13264608
Length = 561
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +1
Query: 265 LGGTCLNVGCIPSKALLHNSHLYH--MAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGL 438
+GGTC+N GC+PSKALL S +H K G++ +D + + ++ N +
Sbjct: 108 VGGTCVNRGCVPSKALLAVSGRMRELQDEHHMKSLGLQVSTAGYDRQAVADHANNLASKI 167
Query: 439 TGGIAMLFQKNKVNLVKGVGTIVAQIKLKY 528
+ + V+++ G GTIV + K++Y
Sbjct: 168 RSNLTNSMKALGVDILTGFGTIVGKQKVRY 197
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 161 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
D DLV+IG+G GG+ AA+ A + G+K +E
Sbjct: 74 DYDLVIIGAGVGGHGAALHAVEKGLKTAIIE 104
>05_01_0413 -
3253345-3253461,3253595-3253666,3253763-3253876,
3254050-3254163,3254420-3254520,3254616-3254694,
3254789-3254863,3254955-3255017,3255281-3255361,
3255449-3255574,3255898-3256022,3256722-3256839,
3257420-3257554,3258029-3258175,3259016-3259321
Length = 590
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +1
Query: 265 LGGTCLNVGCIPSKALLHNSHLYHMA--KHDFKQRGIETGEVTFDFKKMMEYKANAVKGL 438
+GGTC+N GC+PSKALL S +H K G++ +D + + ++ N +
Sbjct: 114 VGGTCVNRGCVPSKALLAVSGRMRELHDEHHMKSLGLQVSSPGYDRQAVADHANNLASKI 173
Query: 439 TGGIAMLFQKNKVNLVKGVGTIVAQIKLKY 528
+ + V+++ G G IV + K++Y
Sbjct: 174 RSNLTNSMKALGVDILSGFGAIVGKQKVRY 203
Score = 35.5 bits (78), Expect = 0.037
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 161 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
D DLV+IG+G GG+ AA+ A + G+K +E
Sbjct: 80 DYDLVIIGAGVGGHGAALHAVEEGLKTAIIE 110
>02_05_1191 +
34856635-34856775,34856878-34856942,34857096-34857165,
34857499-34857570,34857668-34857871,34858793-34858866,
34858965-34859048,34859582-34859669,34859763-34859844,
34860178-34860251,34860474-34860581,34860683-34860747,
34861317-34861430,34861644-34861743,34861840-34861893,
34861972-34862067
Length = 496
Score = 50.8 bits (116), Expect = 9e-07
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 268 GGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIE-TGEVTFDFKKMMEYKANAVKGLTG 444
GGTC+ GC+P K L++ S + D K G E G++ F++K+++E K + L G
Sbjct: 67 GGTCVIRGCVPKKILVYGSS-FRGEFEDAKNFGWEINGDINFNWKRLLENKTQEIVRLNG 125
Query: 445 GIAMLFQKNKVNLVKGVGTIV 507
+ + V +++G G++V
Sbjct: 126 VYQRILGNSGVTMIEGAGSLV 146
>03_01_0439 +
3409422-3409795,3410672-3410897,3411004-3411282,
3411374-3411550,3411653-3411706,3411806-3411954,
3412534-3412597,3412670-3412840,3412922-3413059,
3413180-3413215
Length = 555
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +1
Query: 265 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTG 444
+GGTC+ GC+P K L++ S H + + + D+ ++ K ++ L G
Sbjct: 122 VGGTCVLRGCVPKKLLVYGSKYSHEFEESHGFGWVYETDPKHDWNTLIANKNTELQRLVG 181
Query: 445 GIAMLFQKNKVNLVKGVGTIV 507
+ + V L++G G IV
Sbjct: 182 IYKNILNNSGVTLIEGRGKIV 202
>10_08_0003 -
13992276-13992311,13992461-13992598,13992682-13992852,
13992926-13992989,13993404-13993552,13993700-13993753,
13993894-13994034,13994134-13994412,13994518-13994743,
13995328-13995734
Length = 554
Score = 37.1 bits (82), Expect = 0.012
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 265 LGGTCLNVGCIPSKALLHNSHLYH--MAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGL 438
+GGTC+ GC+P K L++ S H H F R E D+ +M K ++ L
Sbjct: 133 VGGTCVLRGCVPKKLLVYASKYSHEFEESHGFGWR--YGTEPKHDWSTLMTNKNLELQRL 190
Query: 439 TGGIAMLFQKNKVNLVKGVGTIV 507
G + + + V +++G G +V
Sbjct: 191 VGVQTNMLKNSGVTIIEGRGKVV 213
>07_03_1550 +
27641099-27641288,27641433-27641646,27641738-27641843,
27642213-27642257,27642275-27642540,27642980-27642991,
27643201-27643480,27643716-27643823,27644276-27644362,
27644448-27644552,27644995-27645125,27645249-27645309
Length = 534
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
+LV+IGSGP GY AAI AA+ +K V E
Sbjct: 71 NLVIIGSGPAGYTAAIYAARANLKPVVFE 99
>10_08_0357 - 17158414-17160150,17160534-17160710
Length = 637
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = +2
Query: 116 GSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
G V+ T + T D VV+GSG GG VAA A G KVV VE+
Sbjct: 120 GLAVKTGTAAHHTVQ-CDAVVVGSGCGGGVAAAVLASKGYKVVVVEK 165
>10_08_0359 - 17167829-17169595,17169976-17169996
Length = 595
Score = 35.1 bits (77), Expect = 0.049
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +2
Query: 116 GSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
G VR T D V++GSG GG VAA A G KVV VE+
Sbjct: 71 GLAVRPGASDEHHTVRCDAVIVGSGCGGGVAAAVLASAGYKVVVVEK 117
>10_08_0354 -
17104223-17106061,17106770-17106794,17107317-17107561,
17108432-17108677
Length = 784
Score = 34.7 bits (76), Expect = 0.065
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
D VV+GSG GG VAA A G KVV VE+
Sbjct: 262 DAVVVGSGCGGGVAAAVLASAGYKVVVVEK 291
>02_04_0656 -
24769069-24770814,24771552-24771608,24773307-24773582,
24773675-24773965
Length = 789
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 161 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
+ D+ ++GSG GG VAA A G KVV +E+
Sbjct: 281 ECDVAIVGSGCGGGVAAAVLAGAGHKVVVIEK 312
>11_06_0148 +
20631949-20632338,20632838-20633044,20633168-20633267,
20633478-20633560,20633656-20633712,20633790-20633942,
20634016-20634094,20634279-20634427,20634541-20634675,
20634783-20634896,20635065-20635175,20635338-20635373,
20635675-20635884
Length = 607
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMKVVSVERTLL 265
D +V+GSG GG VAA + A G +V+ +E+ ++
Sbjct: 70 DAIVVGSGIGGMVAATQLAAKGARVLVLEKYVI 102
>11_01_0019 +
135610-136296,136736-137275,137367-137518,137683-137959
Length = 551
Score = 31.1 bits (67), Expect = 0.80
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Frame = +1
Query: 148 CYHT*C---RSCCYRFGPWWI-RSSY*SCPAWHEGGLSRKDP 261
CYH C CY G W + + SCP W E + R DP
Sbjct: 454 CYHMTCVCGYEFCYTCGKEWKEKKATCSCPLWDERNIIRDDP 495
>02_01_0675 - 5028910-5030379
Length = 489
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 149 ATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
A + DL V+G GP G A + A+ G+ V +++
Sbjct: 63 ARSTPVDLAVVGGGPAGLAVAQRVAEAGLSVCAID 97
>05_04_0299 -
19958776-19958858,19958883-19959012,19960131-19960175,
19960252-19960370,19960450-19960543,19961824-19961985,
19962117-19962266,19962472-19962537,19962934-19962981,
19963654-19963866,19963953-19964078,19964155-19964232,
19964600-19964671,19965522-19965953,19966863-19966925,
19967497-19967898
Length = 760
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 170 LVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
+ V+GSGP G A++ +LG +V +ER
Sbjct: 241 VAVVGSGPSGLFASLVLGELGAEVTLIER 269
>10_08_0628 +
19389508-19389637,19389774-19389850,19390332-19390438,
19390545-19390626,19390702-19390814,19391023-19391086,
19391192-19391266,19391691-19391807,19392131-19392199,
19392319-19392411,19392733-19392835,19393040-19393164,
19393317-19393366,19393477-19393543,19393663-19393742,
19394038-19394166,19394274-19394340,19394429-19394512
Length = 543
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQL 229
D+VV+G+GP G AAI+ QL
Sbjct: 4 DVVVVGAGPAGLAAAIRLKQL 24
>07_01_0254 -
1893079-1893181,1893455-1893492,1893586-1893706,
1893800-1893869,1894231-1894401,1894485-1894659,
1894746-1894933,1895023-1895166,1895316-1895379,
1895464-1895556,1895649-1895734,1896434-1896574,
1896658-1896804,1896970-1897057,1898080-1898235,
1898428-1898577
Length = 644
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 101 PTFRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
P+ L+R + H D VV+G+G G AAI ++ G + +
Sbjct: 39 PSIPRPQLIRATSSYTVVDHSYDAVVVGAGGAGLRAAIGLSEHGFNTACITK 90
>05_03_0206 -
10049244-10049360,10057973-10058367,10058456-10059011,
10078853-10079032
Length = 415
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 492 CRNYSCPNKVEVHGEKGVETVNTKNILIASGSEVTPFPGVTFD 620
CR + E+ G TVN+K ++ +G++ T F V F+
Sbjct: 81 CRTFGFEPNAELFGAIFFATVNSKTVITPAGTKKTVFGSVNFN 123
>04_04_0783 - 28040828-28041615,28041942-28043589
Length = 811
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 62 LLNMGYKFL-KLASPTFRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMK 238
LLN Y FL F ++ + T H+ ++V+G+G G AA + G K
Sbjct: 164 LLNAAYSFLVSHGHINFGVAPAIKERIPKEPTRHNT-VIVVGAGLAGLAAARQLVAFGFK 222
Query: 239 VVSVE 253
VV +E
Sbjct: 223 VVVLE 227
>01_05_0470 +
22531210-22531530,22532423-22532594,22532685-22532820,
22532913-22533126,22533295-22533438,22533528-22533635,
22533724-22533820,22533904-22534035,22534188-22534320,
22534439-22534604
Length = 540
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMKV 241
DLV+IG GP G A ++A+ G+ V
Sbjct: 119 DLVIIGCGPAGLSLAAESAKKGLNV 143
>01_01_0028 +
209283-209563,209659-209890,210015-210160,210694-210724,
211433-211579,212490-212639,212741-212788
Length = 344
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 434 PLTALALYSIIFLKSNVTSPVSIPLCLKSCLAIW*RCELCSKAFDGIHP 288
PL+ + ++++ S T P S C K+C+ + C LC GI P
Sbjct: 69 PLSCMVCHALLHQSSKCT-PCSHKFC-KACILRFKDCPLCGADIQGIEP 115
>06_02_0181 - 12694304-12694398,12694512-12695547
Length = 376
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 164 ADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
A + +IGSGP + AA+ AA+ +K V E
Sbjct: 48 ARVCIIGSGPAAHTAAVYAARAELKPVLFE 77
>02_05_1061 -
33825948-33825995,33826094-33826243,33827154-33827300,
33827381-33827468,33828569-33828714,33828861-33829089,
33829193-33829482
Length = 365
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -1
Query: 434 PLTALALYSIIFLKSNVTSPVSIPLCLKSCLAIW*RCELCSKAFDGIHP 288
PL+ + ++++ S T P S C K+C+ + C LC GI P
Sbjct: 72 PLSCVVCHALLHQSSKCT-PCSHKFC-KACILRFKDCPLCGADIQGIEP 118
>02_05_0727 + 31264798-31265297,31265962-31266417,31266503-31266938
Length = 463
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 170 LVVIGSGPGGYVAAIKAAQLGMKVVSVERTL 262
+ V+G GP G AA A+ G++ V +ER L
Sbjct: 53 VAVVGGGPAGGAAAEALAKGGVETVLIERKL 83
>02_05_0502 + 29569563-29570487,29570548-29570621
Length = 332
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 176 VIGSGPGGYVAAIKAAQLGMKVVSVE 253
+IGSGP + AAI AA+ +K V E
Sbjct: 15 IIGSGPSAHTAAIYAARAELKPVLFE 40
>01_06_1696 +
39256171-39256393,39256513-39256595,39256692-39256831,
39256882-39257398,39257518-39257565,39257832-39258006,
39258122-39258234,39258329-39258425,39258579-39258798,
39258985-39259144,39259233-39259646
Length = 729
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 80 KFLKLASPTFRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVERT 259
+ L L P F SL T T H +V++G+GP G V + + G+K +E+
Sbjct: 28 RLLLLQRPLF--SSLAGGGTGDDVTPH-LPVVIVGAGPVGLVLSFLLTKFGIKCAVLEKN 84
Query: 260 L 262
+
Sbjct: 85 V 85
>12_02_1218 -
27088206-27088214,27088577-27088643,27088755-27088821,
27088934-27089054,27089272-27089351,27089574-27089686,
27090305-27090420,27090507-27090575,27090684-27090758,
27090836-27090880,27091100-27091187,27091488-27091570,
27091655-27091705,27091848-27091905,27092019-27092201,
27092385-27092546,27092713-27093029
Length = 567
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
D VVIG G G AA A+ G V +ER
Sbjct: 41 DAVVIGGGHNGLAAAAYLARAGRSVAVLER 70
>12_01_0018 +
132654-133304,133726-134265,134357-134436,134673-134949
Length = 515
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +1
Query: 175 CYRFGPWWI-RSSY*SCPAWHEGGLSRKDP 261
CY G W + + SCP W E + R DP
Sbjct: 430 CYTCGKEWKEKKATCSCPLWDERNIIRDDP 459
>02_04_0225 -
21063445-21063636,21063726-21063911,21064052-21064138,
21064589-21064648,21064984-21065052,21065684-21065837,
21066127-21066203,21066634-21066679,21067167-21067253,
21067653-21067799,21069042-21069304
Length = 455
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/81 (20%), Positives = 35/81 (43%)
Frame = +1
Query: 328 LYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTGGIAMLFQKNKVNLVKGVGTIV 507
+Y ++ ++ I +G++ FKK+ E+ +K T I L + ++ +G
Sbjct: 247 MYGLSHRKLLRQLIMSGDIDSAFKKLGEWYPQVIKDETSIICFLLHSQR--FIEFIGAGQ 304
Query: 508 AQIKLKYTERRVLRLLIPKIF 570
+ +KY + L K F
Sbjct: 305 LEDAVKYARSNLANFLTHKAF 325
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,930,308
Number of Sequences: 37544
Number of extensions: 380256
Number of successful extensions: 1060
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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