Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0971
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    49   1e-07
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    49   1e-07
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    49   1e-07
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   3.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.4  
AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse t...    23   6.4  

>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 49.2 bits (112), Expect = 1e-07
 Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
 Frame = +1

Query: 265 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGE---VTFDFKKMMEYKANAVKG 435
           LGGTC+NVGCIP K L+H + L   A HD +  G +  +   +  D+  + E   N +K 
Sbjct: 80  LGGTCVNVGCIPKK-LMHQASLLGEAIHDSQPYGWQLPDPAAIRHDWATLTESVQNHIKS 138

Query: 436 LTGGIAMLFQKNKVNLVKGVG------TIVAQIKLKYTERRV 543
           +     +  +  KV  V G+G      T+VA +K   TER +
Sbjct: 139 VNWVTRVDLRDQKVEYVNGLGYFKDDHTVVAVMK-NQTEREL 179



 Score = 35.1 bits (77), Expect = 0.002
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 134 ATRQYAT-THDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
           AT  +A   ++ DLVVIG G GG   A +A QLG KV  ++
Sbjct: 27  ATVMFAKENYEYDLVVIGGGSGGLACAKQAVQLGAKVAVLD 67


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 49.2 bits (112), Expect = 1e-07
 Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
 Frame = +1

Query: 265 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGE---VTFDFKKMMEYKANAVKG 435
           LGGTC+NVGCIP K L+H + L   A HD +  G +  +   +  D+  + E   N +K 
Sbjct: 56  LGGTCVNVGCIPKK-LMHQASLLGEAIHDSQPYGWQLPDPAAIRHDWATLTESVQNHIKS 114

Query: 436 LTGGIAMLFQKNKVNLVKGVG------TIVAQIKLKYTERRV 543
           +     +  +  KV  V G+G      T+VA +K   TER +
Sbjct: 115 VNWVTRVDLRDQKVEYVNGLGYFKDDHTVVAVMK-NQTEREL 155



 Score = 35.9 bits (79), Expect = 0.001
 Identities = 18/40 (45%), Positives = 23/40 (57%)
 Frame = +2

Query: 134 ATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
           AT      ++ DLVVIG G GG   A +A QLG KV  ++
Sbjct: 4   ATAAEQENYEYDLVVIGGGSGGLACAKQAVQLGAKVAVLD 43


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 49.2 bits (112), Expect = 1e-07
 Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
 Frame = +1

Query: 265 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGE---VTFDFKKMMEYKANAVKG 435
           LGGTC+NVGCIP K L+H + L   A HD +  G +  +   +  D+  + E   N +K 
Sbjct: 53  LGGTCVNVGCIPKK-LMHQASLLGEAIHDSQPYGWQLPDPAAIRHDWATLTESVQNHIKS 111

Query: 436 LTGGIAMLFQKNKVNLVKGVG------TIVAQIKLKYTERRV 543
           +     +  +  KV  V G+G      T+VA +K   TER +
Sbjct: 112 VNWVTRVDLRDQKVEYVNGLGYFKDDHTVVAVMK-NQTEREL 152



 Score = 34.7 bits (76), Expect = 0.003
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = +2

Query: 158 HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
           ++ DLVVIG G GG   A +A QLG KV  ++
Sbjct: 9   YEYDLVVIGGGSGGLACAKQAVQLGAKVAVLD 40


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 193 RARTDNNKICIMCGS 149
           R+ TD  ++CI CGS
Sbjct: 491 RSSTDRQQLCIRCGS 505


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 331  YHMAKHDFKQRGIETGEV 384
            YH++++D  Q  I TG+V
Sbjct: 2925 YHVSRNDVTQHAITTGKV 2942


>AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 129

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +2

Query: 269 EVLVSMLDVYHQKLYCTTHIFTIWPNMTSSKGVLKLV 379
           E+++    +YH + Y +TH    +P  + +  ++K V
Sbjct: 16  EIVIQNSLMYHCRSYISTHQHGFFPRRSVTTNLVKFV 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,411
Number of Sequences: 2352
Number of extensions: 13977
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)