Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0971
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical pr... 111 6e-25
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 50 1e-06
AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin r... 50 1e-06
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 50 1e-06
Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z11115-10|CAA77459.1| 503|Caenorhabditis elegans Hypothetical p... 38 0.006
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 33 0.13
U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein... 29 2.2
AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine re... 29 2.2
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z79756-6|CAB02117.3| 693|Caenorhabditis elegans Hypothetical pr... 28 5.0
U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical pr... 28 5.0
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 28 5.0
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 28 5.0
D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein su... 28 5.0
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 28 5.0
Z68298-5|CAA92602.1| 290|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z29560-12|CAL22705.1| 395|Caenorhabditis elegans Hypothetical p... 28 6.7
>Z82277-3|CAB05249.2| 495|Caenorhabditis elegans Hypothetical
protein LLC1.3 protein.
Length = 495
Score = 111 bits (266), Expect = 6e-25
Identities = 54/85 (63%), Positives = 64/85 (75%)
Frame = +1
Query: 253 KDPTLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVK 432
K+ TLGGTCLNVGCIPSKALL+NSH HMA+HDF RGI+ + + KMME K+N+VK
Sbjct: 60 KNATLGGTCLNVGCIPSKALLNNSHYLHMAQHDFAARGIDC-TASLNLPKMMEAKSNSVK 118
Query: 433 GLTGGIAMLFQKNKVNLVKGVGTIV 507
LTGGI LF+ NKV V+G TIV
Sbjct: 119 QLTGGIKQLFKANKVGHVEGFATIV 143
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/49 (69%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = +3
Query: 510 PNKVEVHGEKG-VETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGAL 653
PN V+ G VET+N +NILIASGSEVTPFPG+T DEKQI++STGAL
Sbjct: 145 PNTVQAKKNDGSVETINARNILIASGSEVTPFPGITIDEKQIVSSTGAL 193
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = +2
Query: 107 FRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
F ++ R Y+ T DADLVVIG GPGGYVAAIKAAQLGMK V VE+
Sbjct: 11 FAKRQFFQVLARNYSNTQDADLVVIGGGPGGYVAAIKAAQLGMKTVCVEK 60
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +1
Query: 265 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRG--IETGEVTFDFKKMMEYKANAVKGL 438
LGGTC+NVGCIP K L+H + L + HD K+ G + G+V + + + + + L
Sbjct: 215 LGGTCVNVGCIPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASL 273
Query: 439 TGGIAMLFQKNKVNLVKGVGTIVAQIKLKYTERR 540
G + ++ V + G ++ T ++
Sbjct: 274 NWGYRVQLREKTVTYINSYGEFTGPFEISATNKK 307
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +2
Query: 140 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
+++ H DL+VIG G GG AA +A++LG KV ++
Sbjct: 165 KEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLD 202
>AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin
reductase homolog protein.
Length = 525
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +1
Query: 265 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRG--IETGEVTFDFKKMMEYKANAVKGL 438
LGGTC+NVGCIP K L+H + L + HD K+ G + G+V + + + + + L
Sbjct: 73 LGGTCVNVGCIPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASL 131
Query: 439 TGGIAMLFQKNKVNLVKGVGTIVAQIKLKYTERR 540
G + ++ V + G ++ T ++
Sbjct: 132 NWGYRVQLREKTVTYINSYGEFTGPFEISATNKK 165
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +2
Query: 140 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
+++ H DL+VIG G GG AA +A++LG KV ++
Sbjct: 23 KEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLD 60
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +1
Query: 265 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRG--IETGEVTFDFKKMMEYKANAVKGL 438
LGGTC+NVGCIP K L+H + L + HD K+ G + G+V + + + + + L
Sbjct: 215 LGGTCVNVGCIPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASL 273
Query: 439 TGGIAMLFQKNKVNLVKGVGTIVAQIKLKYTERR 540
G + ++ V + G ++ T ++
Sbjct: 274 NWGYRVQLREKTVTYINSYGEFTGPFEISATNKK 307
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +2
Query: 140 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
+++ H DL+VIG G GG AA +A++LG KV ++
Sbjct: 165 KEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLD 202
>Z81449-2|CAD88214.1| 459|Caenorhabditis elegans Hypothetical
protein C46F11.2b protein.
Length = 459
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +1
Query: 265 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTG 444
LGGTC+NVGC+P K +++N L+ D G + FD+K + + + +K L G
Sbjct: 40 LGGTCVNVGCVPKK-VMYNCSLHAEFIRDHADYGFDVTLNKFDWKVIKKSRDEYIKRLNG 98
Query: 445 GIAMLFQKNKVNLVKGVGT 501
+ + V ++G T
Sbjct: 99 LYESGLKGSSVEYIRGRAT 117
>Z81449-1|CAB03763.1| 473|Caenorhabditis elegans Hypothetical
protein C46F11.2a protein.
Length = 473
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +1
Query: 265 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGLTG 444
LGGTC+NVGC+P K +++N L+ D G + FD+K + + + +K L G
Sbjct: 54 LGGTCVNVGCVPKK-VMYNCSLHAEFIRDHADYGFDVTLNKFDWKVIKKSRDEYIKRLNG 112
Query: 445 GIAMLFQKNKVNLVKGVGT 501
+ + V ++G T
Sbjct: 113 LYESGLKGSSVEYIRGRAT 131
>Z11115-10|CAA77459.1| 503|Caenorhabditis elegans Hypothetical
protein ZK637.10 protein.
Length = 503
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +1
Query: 265 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQ--RGIETGEVTFDFKKMMEYKANAVKGL 438
+GGTC NVGCIP K + + + KH K GI+ ++ D+ + + + VK
Sbjct: 63 IGGTCANVGCIPKKLMHQAAIVGKELKHADKYGWNGIDQEKIKHDWNVLSKNVNDRVKAN 122
Query: 439 TGGIAMLFQKNKVNLVKGVGTIVAQIKLKYT 531
+ + K+N V + K+ T
Sbjct: 123 NWIYRVQLNQKKINYFNAYAEFVDKDKIVIT 153
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 140 RQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
R+ +++ DL+VIG+G GG + +AA LG V ++
Sbjct: 13 RRLFSSNKFDLIVIGAGSGGLSCSKRAADLGANVALID 50
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -3
Query: 279 TSTS*SRVLSTETTFMPSWAALIAATYPPGPEPITTRSA 163
TSTS + ST T +P+ A+ T PP P P T+ S+
Sbjct: 615 TSTSTTAYTSTPTASIPAATAITTTTAPPKPSPTTSESS 653
>U00048-15|AAB53835.2| 597|Caenorhabditis elegans Lethal protein
721 protein.
Length = 597
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMK 238
D+V++G GP G AAI+ QL K
Sbjct: 52 DVVIVGGGPSGLSAAIRLRQLAEK 75
>AF016446-7|AAC24174.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein21 protein.
Length = 330
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 434 PLTALALYSIIFLKSNV 384
P+ LALYS+IF+KSNV
Sbjct: 24 PIYCLALYSLIFIKSNV 40
>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 170 LVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
+ +IGSGP G AA + ++G VV ER
Sbjct: 1849 IAIIGSGPSGLGAAAQLVKVGHTVVVYER 1877
>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 170 LVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
+ +IGSGP G AA + ++G VV ER
Sbjct: 1849 IAIIGSGPSGLGAAAQLVKVGHTVVVYER 1877
>Z79756-6|CAB02117.3| 693|Caenorhabditis elegans Hypothetical
protein F53C11.2 protein.
Length = 693
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 542 TLLSVYFNFIWATIVPTPLTRLTLFF*KSIAI 447
TLLS F F W+++ P+ ++ F K I++
Sbjct: 642 TLLSYAFAFFWSSLFEVPVAKIEKIFLKPISV 673
>U41555-9|AAB37034.1| 646|Caenorhabditis elegans Hypothetical
protein C03G5.1 protein.
Length = 646
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 334 HMAKHDFKQRGIETGEVTFDFKKMME 411
H KH + IETGEV+ D++ +++
Sbjct: 603 HWRKHSIIRSNIETGEVSLDYRPVID 628
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +3
Query: 450 CNALSEEQ-----G*SCQRCRNYSCPNKVEVHGEKGVETVNTKNILIASGSEVTPFPGVT 614
CN ++E Q G + Q+C + P ++ + + E NI I+ S PFP +
Sbjct: 216 CNGITETQFACSCGDNKQKCLLIAGPPRIYIEPQGPYEVAPGGNINISCTSVAYPFPDIY 275
Query: 615 FDEKQIITSTG 647
+ + Q + + G
Sbjct: 276 WFKNQKVNTDG 286
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +3
Query: 450 CNALSEEQ-----G*SCQRCRNYSCPNKVEVHGEKGVETVNTKNILIASGSEVTPFPGVT 614
CN ++E Q G + Q+C + P ++ + + E NI I+ S PFP +
Sbjct: 279 CNGITETQFACSCGDNKQKCLLIAGPPRIYIEPQGPYEVAPGGNINISCTSVAYPFPDIY 338
Query: 615 FDEKQIITSTG 647
+ + Q + + G
Sbjct: 339 WFKNQKVNTDG 349
>D30651-1|BAA21637.1| 646|Caenorhabditis elegans flavoprotein
subunit of complex II protein.
Length = 646
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 334 HMAKHDFKQRGIETGEVTFDFKKMME 411
H KH + IETGEV+ D++ +++
Sbjct: 603 HWRKHSIIRSNIETGEVSLDYRPVID 628
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +3
Query: 450 CNALSEEQ-----G*SCQRCRNYSCPNKVEVHGEKGVETVNTKNILIASGSEVTPFPGVT 614
CN ++E Q G + Q+C + P ++ + + E NI I+ S PFP +
Sbjct: 279 CNGITETQFACSCGDNKQKCLLIAGPPRIYIEPQGPYEVAPGGNINISCTSVAYPFPDIY 338
Query: 615 FDEKQIITSTG 647
+ + Q + + G
Sbjct: 339 WFKNQKVNTDG 349
>Z68298-5|CAA92602.1| 290|Caenorhabditis elegans Hypothetical
protein F44D12.6 protein.
Length = 290
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 259 PTLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMM 408
PTL G C + AL H ++ Y K + + R I G + KKM+
Sbjct: 77 PTLPGGCNDENAAKEAALRHKTNQY-FPKWEIQTRRITNGTTKEEMKKMV 125
>Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical
protein F52H3.2 protein.
Length = 638
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 128 RIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSV 250
R+ R + T D D++VIG G G +A AA+ G V V
Sbjct: 7 RLLRRCFQT--DVDVIVIGGGHAGCESAAAAARCGSNTVLV 45
>Z29560-12|CAL22705.1| 395|Caenorhabditis elegans Hypothetical
protein K03H1.13 protein.
Length = 395
Score = 27.9 bits (59), Expect = 6.7
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +1
Query: 232 HEGGLSRKDPTLGGTCLNVGCIPS-KALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMM 408
H GGLS++ P L G +P+ K++L + K+D ++ TG + ++
Sbjct: 78 HSGGLSQRMPHLSAYGKAFGTLPNCKSILETK--LEIYKNDLLEKLPSTGGIMITASDVI 135
Query: 409 EYKANAVKGLTGGIAMLFQKNKVNLVKGV--GTIVAQIKLKYTER 537
E NA K + + ++ +K +L G G V K + +R
Sbjct: 136 ENMENAEK-VKSNVDIIVFAHKSSLEVGTQHGVFVMDKKTRKLKR 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,333,424
Number of Sequences: 27780
Number of extensions: 331004
Number of successful extensions: 905
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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