Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0971
(653 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g48030.2 68414.m05351 dihydrolipoamide dehydrogenase 1, mitoc... 108 3e-24
At1g48030.1 68414.m05350 dihydrolipoamide dehydrogenase 1, mitoc... 108 3e-24
At3g17240.3 68416.m02203 dihydrolipoamide dehydrogenase 2, mitoc... 105 2e-23
At3g17240.1 68416.m02202 dihydrolipoamide dehydrogenase 2, mitoc... 105 2e-23
At3g17240.2 68416.m02204 dihydrolipoamide dehydrogenase 2, mitoc... 54 1e-07
At3g16950.1 68416.m02166 dihydrolipoamide dehydrogenase 1, plast... 50 1e-06
At4g16155.1 68417.m02451 dihydrolipoamide dehydrogenase 2, plast... 50 2e-06
At3g24170.1 68416.m03034 glutathione reductase, putative identic... 45 4e-05
At3g54660.1 68416.m06048 gluthatione reductase, chloroplast near... 41 6e-04
At3g23410.1 68416.m02951 alcohol oxidase-related similar to long... 37 0.010
At4g28570.1 68417.m04087 alcohol oxidase-related low similarity ... 36 0.031
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 36 0.031
At1g03990.1 68414.m00385 alcohol oxidase-related low similarity ... 35 0.054
At5g57030.1 68418.m07118 lycopene epsilon cyclase identical to l... 34 0.072
At4g35460.1 68417.m05040 thioredoxin reductase 1 / NADPH-depende... 34 0.072
At5g24155.1 68418.m02841 squalene monooxygenase, putative / squa... 32 0.29
At4g19380.1 68417.m02853 alcohol oxidase-related similar to long... 32 0.29
At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At4g37760.1 68417.m05345 squalene monooxygenase, putative / squa... 30 1.2
At1g06820.1 68414.m00727 carotenoid isomerase, putative similar ... 30 1.2
At4g30720.1 68417.m04354 expressed protein hypothetical protein ... 30 1.5
At3g10230.1 68416.m01224 lycopene beta cyclase (LYC) identical t... 30 1.5
At2g17420.1 68415.m02010 thioredoxin reductase 2 / NADPH-depende... 29 2.0
At1g57770.1 68414.m06554 amine oxidase family contains similarit... 29 2.0
At1g25380.1 68414.m03150 mitochondrial substrate carrier family ... 29 2.0
At5g24160.1 68418.m02842 squalene monooxygenase 1,2 / squalene e... 29 2.7
At1g74470.1 68414.m08627 geranylgeranyl reductase identical to g... 29 2.7
At5g07800.1 68418.m00894 flavin-containing monooxygenase family ... 29 3.6
At1g62830.1 68414.m07093 amine oxidase family protein / SWIRM do... 29 3.6
At5g24150.1 68418.m02839 squalene monooxygenase 1,1 / squalene e... 28 4.7
At4g34215.2 68417.m04859 expressed protein 28 4.7
At4g34215.1 68417.m04858 expressed protein 28 4.7
At3g29830.1 68416.m03796 F-box family protein contains Pfam:PF00... 28 4.7
At5g60140.1 68418.m07539 transcriptional factor B3 family protei... 28 6.2
At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquino... 28 6.2
At5g61290.1 68418.m07691 flavin-containing monooxygenase family ... 27 8.2
At5g49555.1 68418.m06133 amine oxidase-related contains Pfam pro... 27 8.2
At5g37450.1 68418.m04507 leucine-rich repeat transmembrane prote... 27 8.2
At1g63370.1 68414.m07164 flavin-containing monooxygenase family ... 27 8.2
At1g62620.1 68414.m07065 flavin-containing monooxygenase family ... 27 8.2
At1g62540.1 68414.m07056 flavin-containing monooxygenase family ... 27 8.2
>At1g48030.2 68414.m05351 dihydrolipoamide dehydrogenase 1,
mitochondrial / lipoamide dehydrogenase 1 (MTLPD1)
identical to GB:AAF34795 [gi:12704696] from [Arabidopsis
thaliana]
Length = 507
Score = 108 bits (260), Expect = 3e-24
Identities = 51/86 (59%), Positives = 58/86 (67%)
Frame = +1
Query: 253 KDPTLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVK 432
K LGGTCLNVGCIPSKALLH+SH+YH AKH F GI+ V D M+ K NAVK
Sbjct: 74 KRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGIKVSSVEVDLPAMLAQKDNAVK 133
Query: 433 GLTGGIAMLFQKNKVNLVKGVGTIVA 510
LT GI LF+KNKV VKG G ++
Sbjct: 134 NLTRGIEGLFKKNKVTYVKGYGKFIS 159
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +3
Query: 510 PNKVEVHGEKGVET-VNTKNILIASGSEVTPFPGVTFDEKQIITSTGAL 653
PN+V V G T V K+I++A+GS+V PG+T DEK+I++STGAL
Sbjct: 160 PNEVSVETIDGGNTIVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGAL 208
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
D+V+IG GPGGYVAAIKA+QLG+K +E+
Sbjct: 45 DVVIIGGGPGGYVAAIKASQLGLKTTCIEK 74
>At1g48030.1 68414.m05350 dihydrolipoamide dehydrogenase 1,
mitochondrial / lipoamide dehydrogenase 1 (MTLPD1)
identical to GB:AAF34795 [gi:12704696] from [Arabidopsis
thaliana]
Length = 507
Score = 108 bits (260), Expect = 3e-24
Identities = 51/86 (59%), Positives = 58/86 (67%)
Frame = +1
Query: 253 KDPTLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVK 432
K LGGTCLNVGCIPSKALLH+SH+YH AKH F GI+ V D M+ K NAVK
Sbjct: 74 KRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGIKVSSVEVDLPAMLAQKDNAVK 133
Query: 433 GLTGGIAMLFQKNKVNLVKGVGTIVA 510
LT GI LF+KNKV VKG G ++
Sbjct: 134 NLTRGIEGLFKKNKVTYVKGYGKFIS 159
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +3
Query: 510 PNKVEVHGEKGVET-VNTKNILIASGSEVTPFPGVTFDEKQIITSTGAL 653
PN+V V G T V K+I++A+GS+V PG+T DEK+I++STGAL
Sbjct: 160 PNEVSVETIDGGNTIVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGAL 208
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
D+V+IG GPGGYVAAIKA+QLG+K +E+
Sbjct: 45 DVVIIGGGPGGYVAAIKASQLGLKTTCIEK 74
>At3g17240.3 68416.m02203 dihydrolipoamide dehydrogenase 2,
mitochondrial / lipoamide dehydrogenase 2 (MTLPD2)
nearly identical to GB:AAF34796 [gi:6984216] from
[Arabidopsis thaliana]; alternative splice form exists
Length = 507
Score = 105 bits (253), Expect = 2e-23
Identities = 49/86 (56%), Positives = 58/86 (67%)
Frame = +1
Query: 253 KDPTLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVK 432
K LGGTCLNVGCIPSKALLH+SH+YH AKH F G++ V D M+ K AVK
Sbjct: 74 KRGALGGTCLNVGCIPSKALLHSSHMYHEAKHVFANHGVKVSSVEVDLPAMLAQKDTAVK 133
Query: 433 GLTGGIAMLFQKNKVNLVKGVGTIVA 510
LT G+ LF+KNKVN VKG G ++
Sbjct: 134 NLTRGVEGLFKKNKVNYVKGYGKFLS 159
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Frame = +2
Query: 137 TRQYATT--HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
TR +A++ D D+V+IG GPGGYVAAIKAAQLG+K +E+
Sbjct: 33 TRGFASSGSDDNDVVIIGGGPGGYVAAIKAAQLGLKTTCIEK 74
Score = 47.6 bits (108), Expect = 7e-06
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = +3
Query: 510 PNKVEVHGEKGVETV-NTKNILIASGSEVTPFPGVTFDEKQIITSTGAL 653
P++V V G V K+I++A+GS+V PG+T DEK+I++STGAL
Sbjct: 160 PSEVSVDTIDGENVVVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGAL 208
>At3g17240.1 68416.m02202 dihydrolipoamide dehydrogenase 2,
mitochondrial / lipoamide dehydrogenase 2 (MTLPD2)
nearly identical to GB:AAF34796 [gi:6984216] from
[Arabidopsis thaliana]; alternative splice form exists
Length = 507
Score = 105 bits (253), Expect = 2e-23
Identities = 49/86 (56%), Positives = 58/86 (67%)
Frame = +1
Query: 253 KDPTLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGEVTFDFKKMMEYKANAVK 432
K LGGTCLNVGCIPSKALLH+SH+YH AKH F G++ V D M+ K AVK
Sbjct: 74 KRGALGGTCLNVGCIPSKALLHSSHMYHEAKHVFANHGVKVSSVEVDLPAMLAQKDTAVK 133
Query: 433 GLTGGIAMLFQKNKVNLVKGVGTIVA 510
LT G+ LF+KNKVN VKG G ++
Sbjct: 134 NLTRGVEGLFKKNKVNYVKGYGKFLS 159
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Frame = +2
Query: 137 TRQYATT--HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
TR +A++ D D+V+IG GPGGYVAAIKAAQLG+K +E+
Sbjct: 33 TRGFASSGSDDNDVVIIGGGPGGYVAAIKAAQLGLKTTCIEK 74
Score = 47.6 bits (108), Expect = 7e-06
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = +3
Query: 510 PNKVEVHGEKGVETV-NTKNILIASGSEVTPFPGVTFDEKQIITSTGAL 653
P++V V G V K+I++A+GS+V PG+T DEK+I++STGAL
Sbjct: 160 PSEVSVDTIDGENVVVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGAL 208
>At3g17240.2 68416.m02204 dihydrolipoamide dehydrogenase 2,
mitochondrial / lipoamide dehydrogenase 2 (MTLPD2)
nearly identical to GB:AAF34796 [gi:6984216] from
[Arabidopsis thaliana]; alternative splice form exists
Length = 127
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Frame = +2
Query: 137 TRQYATT--HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
TR +A++ D D+V+IG GPGGYVAAIKAAQLG+K +E+
Sbjct: 33 TRGFASSGSDDNDVVIIGGGPGGYVAAIKAAQLGLKTTCIEK 74
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1
Query: 253 KDPTLGGTCLNVGCIPSKALL 315
K LGGTCLNVGCIPSK +L
Sbjct: 74 KRGALGGTCLNVGCIPSKVIL 94
>At3g16950.1 68416.m02166 dihydrolipoamide dehydrogenase 1,
plastidic / lipoamide dehydrogenase 1 (PTLPD1) identical
to plastidic lipoamide dehydrogenase from Arabidopsis
thaliana [gi:7159282]
Length = 570
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Frame = +1
Query: 265 LGGTCLNVGCIPSKALLHNSHLYH--MAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGL 438
+GGTC+N GC+PSKALL S +H K G++ +D + + ++ N +
Sbjct: 120 VGGTCVNRGCVPSKALLAVSGRMRELQNEHHMKSFGLQVSAAGYDRQGVADHANNLATKI 179
Query: 439 TGGIAMLFQKNKVNLVKGVGTIVAQIKLKYTERRVL 546
+ + V+++ G G+++ K+KY + ++
Sbjct: 180 RNNLTNSMKAIGVDILTGFGSVLGPQKVKYGKDNII 215
Score = 35.5 bits (78), Expect = 0.031
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 161 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
D DL++IG+G GG+ AA+ A + G+K +E
Sbjct: 86 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIE 116
>At4g16155.1 68417.m02451 dihydrolipoamide dehydrogenase 2,
plastidic / lipoamide dehydrogenase 2 (PTLPD2) identical
to plastidic lipoamide dehydrogenase from Arabidopsis
thaliana [gi:7159284]
Length = 567
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +1
Query: 265 LGGTCLNVGCIPSKALLHNSHLYH--MAKHDFKQRGIETGEVTFDFKKMMEYKANAVKGL 438
+GGTC+N GC+PSKALL S +H K G++ +D + + ++ +N +
Sbjct: 118 VGGTCVNRGCVPSKALLAVSGRMRELQNEHHMKAFGLQVSAAGYDRQGVADHASNLATKI 177
Query: 439 TGGIAMLFQKNKVNLVKGVGTIVAQIKLKY 528
+ + V+++ G G ++ K+KY
Sbjct: 178 RNNLTNSMKALGVDILTGFGAVLGPQKVKY 207
Score = 35.5 bits (78), Expect = 0.031
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 161 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
D DL++IG+G GG+ AA+ A + G+K +E
Sbjct: 84 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIE 114
>At3g24170.1 68416.m03034 glutathione reductase, putative identical
to GB:P48641 from [Arabidopsis thaliana]
Length = 499
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 265 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIETGE-VTFDFKKMMEYKANAVKGLT 441
+GGTC+ GC+P K L++ + Y D K G E E V F +KK+++ K + + L
Sbjct: 69 VGGTCVIRGCVPKKILVYGA-TYGGELEDAKNYGWEINEKVDFTWKKLLQKKTDEILRLN 127
Query: 442 GGIAMLFQKNKVNLVKGVGTIV 507
L V L +G G +V
Sbjct: 128 NIYKRLLANAAVKLYEGEGRVV 149
>At3g54660.1 68416.m06048 gluthatione reductase, chloroplast nearly
identical to SP|P42770 Glutathione reductase,
chloroplast precursor (EC 1.8.1.7) (GR) (GRASE)
{Arabidopsis thaliana}; identical to cDNA glutathione
reductase GI:451197
Length = 565
Score = 41.1 bits (92), Expect = 6e-04
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +1
Query: 265 LGGTCLNVGCIPSKALLHNSHLYHMAK--HDFKQRGIETGEVTFDFKKMMEYKANAVKGL 438
+GGTC+ GC+P K L++ S H + H F + ET E + D+ ++ K ++ L
Sbjct: 131 VGGTCVLRGCVPKKLLVYASKYSHEFEDSHGFGWK-YET-EPSHDWTTLIANKNAELQRL 188
Query: 439 TGGIAMLFQKNKVNLVKGVGTIV 507
TG + K V L++G G ++
Sbjct: 189 TGIYKNILSKANVKLIEGRGKVI 211
>At3g23410.1 68416.m02951 alcohol oxidase-related similar to long
chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 746
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Frame = +2
Query: 152 TTHDA-----DLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
T HDA D+VV+GSG GG VAA A+ G+KVV +E+
Sbjct: 224 TEHDAIRIKCDVVVVGSGSGGGVAASVLAKSGLKVVVLEK 263
>At4g28570.1 68417.m04087 alcohol oxidase-related low similarity to
long chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 748
Score = 35.5 bits (78), Expect = 0.031
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
D VV+GSG GG VAA A+ G+KV+ +E+
Sbjct: 239 DAVVVGSGSGGGVAAANLAKAGLKVLVLEK 268
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 35.5 bits (78), Expect = 0.031
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
++V+IGSGP GY AAI AA+ +K V E
Sbjct: 85 NVVIIGSGPAGYTAAIYAARANLKPVVFE 113
>At1g03990.1 68414.m00385 alcohol oxidase-related low similarity to
long chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]; Location
of EST 248L9T7, gb|AA713296
Length = 758
Score = 34.7 bits (76), Expect = 0.054
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 161 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
+ D VV+GSG GG VAA A+ G++VV +E+
Sbjct: 245 ECDAVVVGSGCGGGVAAAILAKSGLRVVVIEK 276
>At5g57030.1 68418.m07118 lycopene epsilon cyclase identical to
lycopene epsilon cyclase [GI:1399181]
Length = 524
Score = 34.3 bits (75), Expect = 0.072
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMKV 241
DLVVIG GP G A ++A+LG+KV
Sbjct: 110 DLVVIGCGPAGLALAAESAKLGLKV 134
>At4g35460.1 68417.m05040 thioredoxin reductase 1 / NADPH-dependent
thioredoxin reductase 1 (NTR1) identical to SP|Q39243
Length = 375
Score = 34.3 bits (75), Expect = 0.072
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 101 PTFRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
P+ S + A TH+ L ++GSGP + AAI AA+ +K + E
Sbjct: 30 PSLASAAFSSSAVMNGLETHNTRLCIVGSGPAAHTAAIYAARAELKPLLFE 80
>At5g24155.1 68418.m02841 squalene monooxygenase, putative /
squalene epoxidase, putative similar to SP|O65404 (SE
1,1), SP|O65402 (SE 1,2)
Length = 121
Score = 32.3 bits (70), Expect = 0.29
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +2
Query: 164 ADLVVIGSGPGGYVAAIKAAQLGMKVVSVERTL 262
AD++++G+G GG A A+ G +V+++ER +
Sbjct: 48 ADVIIVGAGVGGSALAYSLAKDGRRVLAIERDM 80
>At4g19380.1 68417.m02853 alcohol oxidase-related similar to long
chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 726
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
D VV+GSG GG VAA A+ G KV+ +E
Sbjct: 225 DAVVVGSGSGGGVAAGVLAKAGYKVLVIE 253
>At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature and Pfam domain
PF01485: IBR domain
Length = 655
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Frame = +1
Query: 148 CYHT*CR---SCCYRFGPWWIR---SSY*SCPAWHEGGLSRKDPTLGGTCLN 285
C H CR CY G W + + CP W+E ++R+DP N
Sbjct: 483 CNHITCRCGHEFCYNCGGGWNKIMGTCLNRCPTWNEEYITRQDPARANVAAN 534
>At4g37760.1 68417.m05345 squalene monooxygenase, putative /
squalene epoxidase, putative similar to SP|O65404 (SE
1,1), SP|O65402 (SE 1,2), SP|O65403 (SE 2)
Length = 525
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 86 LKLASPTFRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVERTL 262
L+ S T VR T + D D++++G+G G A + G +V +ER L
Sbjct: 29 LRRRSKTIHGSVNVRNGTLTVKSGTDVDIIIVGAGVAGAALAHTLGKEGRRVHVIERDL 87
>At1g06820.1 68414.m00727 carotenoid isomerase, putative similar to
carotenoid isomerase from Lycopersicon esculentum
[gi:19550437]; contains Pfam profile: PF02032 Phytoene
dehydrogenase related enzyme
Length = 595
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMKVVSVERTLL 265
D +VIGSG GG VAA + A +V+ +E+ L+
Sbjct: 79 DAIVIGSGIGGLVAATQLAVKEARVLVLEKYLI 111
>At4g30720.1 68417.m04354 expressed protein hypothetical protein -
Synechocystis sp. (strain PCC 6803),PIR2:S76076
Length = 749
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 170 LVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
+ V+G GP G AA+ A+ G V +ER
Sbjct: 269 IAVVGGGPSGLFAALVLAEFGADVTLIER 297
>At3g10230.1 68416.m01224 lycopene beta cyclase (LYC) identical to
lycopene beta cyclase GI:1399183|GB:AAB53337
[Arabidopsis thaliana]
Length = 501
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
DL ++G GP G A + ++ G+ V S++
Sbjct: 84 DLAIVGGGPAGLAVAQQVSEAGLSVCSID 112
>At2g17420.1 68415.m02010 thioredoxin reductase 2 / NADPH-dependent
thioredoxin reductase 2 (NTR2) identical to SP|Q39242
Length = 330
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 155 THDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 253
TH + ++GSGP + AAI A++ +K + E
Sbjct: 3 THKTKVCIVGSGPAAHTAAIYASRAELKPLLFE 35
>At1g57770.1 68414.m06554 amine oxidase family contains similarity
to carotenoid isomerase [Lycopersicon esculentum]
GI:19550437, phytoene dehydrogenase (PDH1) GI:433144
from (Cercospora nicotianae); contains Pfam profile
PF01593 amine oxidase, flavin-containing
Length = 574
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Frame = +2
Query: 101 PTFRSGSLVRIATRQYATTH-----------DADLVVIGSGPGGYVAAIKAAQLGMKVVS 247
PT RS S +R ++ A+++ +AD+VVIGSG GG A+ V+
Sbjct: 21 PTIRSSSFIRSSSSSSASSNGNLKEPFSGEPEADVVVIGSGIGGLCCGALLARYDQDVIV 80
Query: 248 VE 253
+E
Sbjct: 81 LE 82
>At1g25380.1 68414.m03150 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 363
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 367 IETGEVTFDFKKMMEYKANAVKGLT-GGIAMLF 462
IE G TFD++ + E ANA G T G IA F
Sbjct: 2 IEHGNSTFDYRSIREVAANAGAGATAGAIAATF 34
>At5g24160.1 68418.m02842 squalene monooxygenase 1,2 / squalene
epoxidase 1,2 (SQP1,2) identical to SP|O65402
Length = 517
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 164 ADLVVIGSGPGGYVAAIKAAQLGMKVVSVERTL 262
AD++++G+G GG A A+ G +V +ER +
Sbjct: 46 ADVIIVGAGVGGSALAYALAKDGRRVHVIERDM 78
>At1g74470.1 68414.m08627 geranylgeranyl reductase identical to
geranylgeranyl reductase GB:Y14044 [Arabidopsis
thaliana] (involvement: chlorophyll, the tocopherol and
the phylloquinone pathways Eur J Biochem 1998 Jan
15;251(1-2):413-7)
Length = 467
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 170 LVVIGSGPGGYVAAIKAAQLGMKVVSVERTL 262
+ VIG GP G AA AQ G++ + +ER +
Sbjct: 58 VAVIGGGPAGGAAAETLAQGGIETILIERKM 88
>At5g07800.1 68418.m00894 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase 2 (FMO2) from Homo
sapiens [GI:1834493]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like
Length = 460
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 137 TRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
T + + + + VIG+GP G V+A + + G KVV +E+
Sbjct: 5 TSEASRSRSKKVCVIGAGPAGLVSARELRKEGHKVVVLEQ 44
>At1g62830.1 68414.m07093 amine oxidase family protein / SWIRM
domain-containing protein contains Pfam profile: PF01593
Flavin containing amine oxidase
Length = 844
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 56 KKLLNMGYKFL-KLASPTFRSGSLVRIAT-RQYATTHDADLVVIGSGPGGYVAAIKAAQL 229
K L++ Y FL + F +++ A R + ++VV+G+G G VAA + +
Sbjct: 228 KTLVDTAYNFLLEHGYINFGLAPVIKEAKLRSFDGVEPPNVVVVGAGLAGLVAARQLLSM 287
Query: 230 GMKVVSVE 253
G +V+ +E
Sbjct: 288 GFRVLVLE 295
>At5g24150.1 68418.m02839 squalene monooxygenase 1,1 / squalene
epoxidase 1,1 (SQP1,1) identical to SP|O65404
Length = 516
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMKVVSVERTL 262
D++++G+G GG A A+ G +V +ER L
Sbjct: 47 DVIIVGAGVGGSALAYALAKDGRRVHVIERDL 78
>At4g34215.2 68417.m04859 expressed protein
Length = 260
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 173 VVIGSGPGGYVAAIKAAQLGMKVVSV 250
V I SG GGY+ ++ AQLG+K+ +V
Sbjct: 198 VAIASG-GGYIDKVREAQLGLKLSNV 222
>At4g34215.1 68417.m04858 expressed protein
Length = 260
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 173 VVIGSGPGGYVAAIKAAQLGMKVVSV 250
V I SG GGY+ ++ AQLG+K+ +V
Sbjct: 198 VAIASG-GGYIDKVREAQLGLKLSNV 222
>At3g29830.1 68416.m03796 F-box family protein contains Pfam:PF00646
F-box domain
Length = 464
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -3
Query: 540 PSLRVLQLYLGNYSSYTFDKINLVLLKE 457
P++ + + Y GN + F K+N++LLKE
Sbjct: 239 PNIEIFK-YSGNVIVFDFQKVNMILLKE 265
>At5g60140.1 68418.m07539 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 328
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 451 AMLFQKNKVNLVKGVGTIVAQIKLKYTERRVLRL 552
A+ QKN VKG G+ + + K+K T++ + L
Sbjct: 277 AIKIQKNGCIFVKGFGSFIRRNKMKMTDKMICEL 310
>At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquinone
oxidoreductase family protein contains Pfam profile:
PF05187 Electron transfer flavoprotein-ubiquinone
oxidoreductase
Length = 633
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMK 238
D++++G+GP G AAI+ QL +
Sbjct: 101 DVLIVGAGPAGLSAAIRLKQLSQE 124
>At5g61290.1 68418.m07691 flavin-containing monooxygenase family
protein / FMO family protein low similarity to FMO3 from
Homo sapiens [SP|P31513]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like; supported by
full-length cDNA Ceres:14492
Length = 461
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 176 VIGSGPGGYVAAIKAAQLGMKVVSVER 256
VIG+GP G V+A + + G KVV +E+
Sbjct: 18 VIGAGPSGLVSARELKKEGHKVVVMEQ 44
>At5g49555.1 68418.m06133 amine oxidase-related contains Pfam
profile PF01593: amine oxidase, flavin-containing
Length = 556
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 167 DLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
D VVIG G G AA A+ G+ V +ER
Sbjct: 15 DAVVIGGGHNGLTAAAYLARGGLSVAVLER 44
>At5g37450.1 68418.m04507 leucine-rich repeat transmembrane protein
kinase, putative
Length = 935
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +2
Query: 74 GYKFLKLASPTFRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLG 232
GY F +L S T L +I Y + L PGG V A+K A+ G
Sbjct: 594 GYNFTELDSATSSFSDLSQIGRGGYGKVYKGHL------PGGLVVAVKRAEQG 640
>At1g63370.1 68414.m07164 flavin-containing monooxygenase family
protein / FMO family protein similar to FMO5 from Cavia
porcellus [SP|P49109]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like
Length = 450
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 155 THDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
T + VIG+GP G VAA + + G VV E+
Sbjct: 8 TRSHHVAVIGAGPAGLVAARELRREGHSVVVFEK 41
>At1g62620.1 68414.m07065 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase 3 (FMO3) from Rattus
norvegicus [GI:12006730], FMO1 from Canis familiaris]
[GI:15420722], FMO1 from Homo sapiens [SP|Q01740];
contains Pfam profile: PF00743 Flavin-binding
monooxygenase-like
Length = 450
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 155 THDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
T + VIG+GP G VAA + + G VV E+
Sbjct: 8 TRSHHVAVIGAGPAGLVAARELRREGHSVVVFEK 41
>At1g62540.1 68414.m07056 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase GB:AAA21178 GI:349534
from Oryctolagus cuniculus [SP|P32417], SP|P97501 from
Mus musculus; contains Pfam profile PF00743
Flavin-binding monooxygenase-like
Length = 457
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 170 LVVIGSGPGGYVAAIKAAQLGMKVVSVER 256
+VVIG+G G VAA + ++ G VV +ER
Sbjct: 13 VVVIGAGAAGLVAARELSREGHTVVVLER 41
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,427,358
Number of Sequences: 28952
Number of extensions: 308765
Number of successful extensions: 979
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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